RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 NFATC2IPQ8NCF5 419 aa9.4□□□□□ -0.91
COL6A5-201ENST00000265379 DDX12PQ92771 950 aa9.4□□□□□ -0.91
COL6A5-201ENST00000265379 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.91
COL6A5-201ENST00000265379 XRN1Q8IZH2 1706 aaKnown RBP9.4□□□□□ -0.91
COL6A5-201ENST00000265379 USP42Q9H9J4 1324 aaKnown RBP9.39□□□□□ -0.91
COL6A5-201ENST00000265379 GOLGA8AA7E2F4 631 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 TCP11L1Q9NUJ3 509 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 ESPNB1AK53 854 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 RNF214Q8ND24 703 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 SEPT10Q9P0V9 454 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 NCKAP5LQ9HCH0 1330 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 ZBTB43O43298 467 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 MAP2K1Q02750 393 aaPredicted RBP9.39□□□□□ -0.91
COL6A5-201ENST00000265379 WTAPQ15007 396 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 BOLA2Q9H3K6 86 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 MPHOSPH10O00566 681 aaKnown RBP9.39□□□□□ -0.91
COL6A5-201ENST00000265379 HMGB3O15347 200 aaKnown RBP9.39□□□□□ -0.91
COL6A5-201ENST00000265379 RFC4P35249 363 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 ATP6V1AP38606 617 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 MATR3P43243 847 aaKnown RBP eCLIP9.39□□□□□ -0.91
COL6A5-201ENST00000265379 USP5P45974 858 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 TCIRG1Q13488 830 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 CCDC102BQ68D86 513 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 LMBR1LQ6UX01 489 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 RBM8AQ9Y5S9 174 aaKnown RBP9.39□□□□□ -0.91
COL6A5-201ENST00000265379 CC2D2BQ6DHV5 1058 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 CEMIPQ8WUJ3 1361 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 UBE3CQ15386 1083 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 TAF4BQ92750 862 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 RBM17Q96I25 401 aaKnown RBP9.39□□□□□ -0.91
COL6A5-201ENST00000265379 DAAM2Q86T65 1068 aa9.39□□□□□ -0.91
COL6A5-201ENST00000265379 MED1Q15648 1581 aaPredicted RBP9.38□□□□□ -0.91
COL6A5-201ENST00000265379 ORC2Q13416 577 aaPredicted RBP9.38□□□□□ -0.91
COL6A5-201ENST00000265379 MRPS27Q92552 414 aaKnown RBP9.38□□□□□ -0.91
COL6A5-201ENST00000265379 SIGLEC1Q9BZZ2 1709 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 USHBP1Q8N6Y0 703 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 PTCD1O75127 700 aaKnown RBP9.38□□□□□ -0.91
COL6A5-201ENST00000265379 ATP2B2Q01814 1243 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 HDAC9Q9UKV0 1011 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 TCHHQ07283 1943 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 CETN1Q12798 172 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 GIMAP6Q6P9H5 292 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 ZNF444Q8N0Y2 327 aaPredicted RBP9.38□□□□□ -0.91
COL6A5-201ENST00000265379 ZNF274Q96GC6 653 aaPredicted RBP9.38□□□□□ -0.91
COL6A5-201ENST00000265379 DDX23Q9BUQ8 820 aaKnown RBP9.38□□□□□ -0.91
COL6A5-201ENST00000265379 TRIM14Q14142 442 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 TTC6Q86TZ1 520 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 MIS18AQ9NYP9 233 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 PAXBP1Q9Y5B6 917 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 ZBTB38Q8NAP3 1195 aaPredicted RBP9.38□□□□□ -0.91
COL6A5-201ENST00000265379 TOPAZ1Q8N9V7 1692 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 IFIT3O14879 490 aaKnown RBP9.38□□□□□ -0.91
COL6A5-201ENST00000265379 TMEM67Q5HYA8 995 aa9.38□□□□□ -0.91
COL6A5-201ENST00000265379 IRS4O14654 1257 aaPredicted RBP9.37□□□□□ -0.91
COL6A5-201ENST00000265379 FKBP15Q5T1M5 1219 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 CREB3L3Q68CJ9 461 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 ARPP21Q9UBL0 812 aaPredicted RBP9.37□□□□□ -0.91
COL6A5-201ENST00000265379 MAP3K15Q6ZN16 1313 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 CLUL1Q15846 466 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 MKNK2Q9HBH9 465 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 GJB2P29033 226 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 USP44Q9H0E7 712 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 KAT14Q9H8E8 782 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 MYL1P05976 194 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 MIPOL1Q8TD10 442 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 SHPRHQ149N8 1683 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 XPCQ01831 940 aaPredicted RBP9.37□□□□□ -0.91
COL6A5-201ENST00000265379 MMP14P50281 582 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 RNF168Q8IYW5 571 aaPredicted RBP9.37□□□□□ -0.91
COL6A5-201ENST00000265379 CALML4Q96GE6 196 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 HAUS7Q99871 368 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 PLA2G12BQ9BX93 195 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 RPS6KB1P23443 525 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 RTN1Q16799 776 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 MAP9Q49MG5 647 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 TSPYL6Q8N831 410 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 SPC24Q8NBT2 197 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 BICDL2A1A5D9 508 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 ZNF445P59923 1031 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 CALCOCO1Q9P1Z2 691 aa9.37□□□□□ -0.91
COL6A5-201ENST00000265379 SLIT3O75094 1523 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 ANGEL1Q9UNK9 670 aaKnown RBP9.36□□□□□ -0.91
COL6A5-201ENST00000265379 KAT6AQ92794 2004 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 ZWINTO95229 277 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 DEXIO95424 95 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 FERMT2Q96AC1 680 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL6A5-201ENST00000265379 BICC1Q9H694 974 aaKnown RBP9.36□□□□□ -0.91
COL6A5-201ENST00000265379 MRVI1Q9Y6F6 885 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 TRAPPC10P48553 1259 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 PPM1FP49593 454 aaPredicted RBP9.36□□□□□ -0.91
COL6A5-201ENST00000265379 UBE4AQ14139 1066 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 ABCD1P33897 745 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 ZBTB17Q13105 803 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 MAP3K7CLP57077 242 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 ZBTB3Q9H5J0 574 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 CABP5Q9NP86 173 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 ZMYM6O95789 1325 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 KDM4AO75164 1064 aa9.36□□□□□ -0.91
COL6A5-201ENST00000265379 ZMAT2Q96NC0 199 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms