RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 MRVI1Q9Y6F6 885 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 CCDC122Q5T0U0 273 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 HOOK3Q86VS8 718 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 RUBCNQ92622 972 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 TRIM47Q96LD4 638 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 STRN4Q9NRL3 753 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 HELLSQ9NRZ9 838 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 CALML3P27482 149 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 UBA7P41226 1012 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 P3H4Q92791 437 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 FAM177BA6PVY3 158 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 CCT2P78371 535 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 TSNAXIP1Q2TAA8 658 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 ANO1Q5XXA6 986 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 DMRT2Q9Y5R5 561 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 RTL9Q8NET4 1388 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 ALDH3A1P30838 453 aa13.19□□□□□ -0.3
DNMT3A-201ENST00000264709 GOLGA8KD6RF30 607 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.18□□□□□ -0.33e-6■■□□□ 14.1
DNMT3A-201ENST00000264709 BUB1BO60566 1050 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 POLR3DP05423 398 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 TATP17735 454 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 SH2D4BQ5SQS7 431 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 KSR2Q6VAB6 950 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 PHACTR2O75167 634 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 FBXO38Q6PIJ6 1188 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 CCDC84Q86UT8 332 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 KIF4AO95239 1232 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 CEP85LQ5SZL2 805 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 FBF1Q8TES7 1133 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 CCDC77Q9BR77 488 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 SMARCC2Q8TAQ2 1214 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 XPO4Q9C0E2 1151 aaKnown RBP13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 CNNM1Q9NRU3 951 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 NEDD9Q14511 834 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 ZSWIM6Q9HCJ5 1215 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 KCNH3Q9ULD8 1083 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 NUP133Q8WUM0 1156 aa13.18□□□□□ -0.3
DNMT3A-201ENST00000264709 NEURL4Q96JN8 1562 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 EFCAB6Q5THR3 1501 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 NBPF9Q3BBW0 867 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 CCDC178Q5BJE1 867 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 ALG1Q9BT22 464 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 PKP1Q13835 747 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 MYO1CO00159 1063 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 NMIQ13287 307 aaPredicted RBP13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 JAKMIP2Q96AA8 810 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 CARD6Q9BX69 1037 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 CYP2E1P05181 493 aaPredicted RBP13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 GBP1P32455 592 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 IL15P40933 162 aaPredicted RBP13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 MUM1L1Q5H9M0 696 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 NME9Q86XW9 330 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 POLR3EQ9NVU0 708 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 WWC3Q9ULE0 1092 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 RHOXF2BP0C7M4 288 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 RHOXF2Q9BQY4 288 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 KLF18A0A0U1RQI7 1052 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 GNAT2P19087 354 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 KIAA0753Q2KHM9 967 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 C8orf74Q6P047 294 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 TRIM58Q8NG06 486 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 NAA25Q14CX7 972 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 TDRD12Q587J7 1177 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 SEC63Q9UGP8 760 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 GUCA1BQ9UMX6 200 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 SAR1BQ9Y6B6 198 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 LMNTD2Q8IXW0 634 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 HAUS4Q9H6D7 363 aa13.17□□□□□ -0.3
DNMT3A-201ENST00000264709 MICU3Q86XE3 530 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 SSH3Q8TE77 659 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 EXOC1Q9NV70 894 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 ATP11AP98196 1134 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 PPP1R13BQ96KQ4 1090 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 OSBPL5Q9H0X9 879 aaPredicted RBP13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 IDEP14735 1019 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 HOXA7P31268 230 aaPredicted RBP13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 MFSD6Q6ZSS7 791 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 CLCN6P51797 869 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 RBBP5Q15291 538 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 ZFYVE27Q5T4F4 411 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 YY1AP1Q9H869 796 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 NLRP1Q9C000 1473 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 CLNS1AP54105 237 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 STIM2Q9P246 746 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 PPP2R2CQ9Y2T4 447 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 ZEB2O60315 1214 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 FERMT2Q96AC1 680 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 CDC23Q9UJX2 597 aa13.16□□□□□ -0.3
DNMT3A-201ENST00000264709 CALM1P0DP23 149 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 CALM2P0DP24 149 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 CALM3P0DP25 149 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms