RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 VEZTQ9HBM0 779 aa15.93■□□□□ 0.14
CDH3-201ENST00000264012 KIAA0754O94854 1291 aa15.93■□□□□ 0.14
CDH3-201ENST00000264012 SYNMO15061 1565 aa15.93■□□□□ 0.14
CDH3-201ENST00000264012 GSPT1P15170 499 aaKnown RBP15.93■□□□□ 0.14
CDH3-201ENST00000264012 BEND3Q5T5X7 828 aa15.93■□□□□ 0.14
CDH3-201ENST00000264012 TTC12Q9H892 705 aaPredicted RBP15.93■□□□□ 0.14
CDH3-201ENST00000264012 PREX2Q70Z35 1606 aa15.92■□□□□ 0.14
CDH3-201ENST00000264012 ATP7BP35670 1465 aa15.92■□□□□ 0.14
CDH3-201ENST00000264012 ZAP70P43403 619 aa15.92■□□□□ 0.14
CDH3-201ENST00000264012 NOLC1Q14978 699 aaKnown RBP eCLIP15.92■□□□□ 0.14
CDH3-201ENST00000264012 KRT79Q5XKE5 535 aa15.92■□□□□ 0.14
CDH3-201ENST00000264012 KDRP35968 1356 aa15.92■□□□□ 0.14
CDH3-201ENST00000264012 CGNQ9P2M7 1197 aaKnown RBP15.92■□□□□ 0.14
CDH3-201ENST00000264012 ZKSCAN5Q9Y2L8 839 aa15.92■□□□□ 0.14
CDH3-201ENST00000264012 A0A1B0GVL5 298 aa15.92■□□□□ 0.14
CDH3-201ENST00000264012 PRIMPOLQ96LW4 560 aa15.92■□□□□ 0.14
CDH3-201ENST00000264012 ROBO2Q9HCK4 1378 aa15.92■□□□□ 0.14
CDH3-201ENST00000264012 SPDYE3A6NKU9 549 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 TMCO5BA8MYB1 307 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 NOP2P46087 812 aaKnown RBP15.91■□□□□ 0.14
CDH3-201ENST00000264012 FAM173BQ6P4H8 233 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 EDC3Q96F86 508 aaKnown RBP15.91■□□□□ 0.14
CDH3-201ENST00000264012 SPAG5Q96R06 1193 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 PAXBP1Q9Y5B6 917 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 PRDM1O75626 825 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 FAM160A1Q05DH4 1040 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 HS1BP3Q53T59 392 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 DTHD1Q6ZMT9 781 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 PLA2R1Q13018 1463 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 MROH5Q6ZUA9 1318 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 IGSF1Q8N6C5 1336 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 ZNF521Q96K83 1311 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 IQUBQ8NA54 791 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 EAF2Q96CJ1 260 aaPredicted RBP15.91■□□□□ 0.14
CDH3-201ENST00000264012 SAP30BPQ9UHR5 308 aaKnown RBP15.91■□□□□ 0.14
CDH3-201ENST00000264012 WWC3Q9ULE0 1092 aa15.91■□□□□ 0.14
CDH3-201ENST00000264012 RILPL1Q5EBL4 403 aa15.9■□□□□ 0.14
CDH3-201ENST00000264012 TTLL7Q6ZT98 887 aa15.9■□□□□ 0.14
CDH3-201ENST00000264012 DEXIO95424 95 aa15.9■□□□□ 0.14
CDH3-201ENST00000264012 PARP1P09874 1014 aaKnown RBP15.9■□□□□ 0.14
CDH3-201ENST00000264012 SPATA5Q8NB90 893 aa15.9■□□□□ 0.14
CDH3-201ENST00000264012 ANKRD62A6NC57 917 aa15.9■□□□□ 0.14
CDH3-201ENST00000264012 STX17P56962 302 aa15.9■□□□□ 0.14
CDH3-201ENST00000264012 EHBP1Q8NDI1 1231 aa15.9■□□□□ 0.14
CDH3-201ENST00000264012 NLRP1Q9C000 1473 aa15.9■□□□□ 0.14
CDH3-201ENST00000264012 PRDM15P57071 1507 aaPredicted RBP15.9■□□□□ 0.14
CDH3-201ENST00000264012 MACROD2A1Z1Q3 448 aa15.9■□□□□ 0.14
CDH3-201ENST00000264012 DNAI2Q9GZS0 605 aa15.9■□□□□ 0.14
CDH3-201ENST00000264012 ZSWIM4Q9H7M6 989 aa15.9■□□□□ 0.14
CDH3-201ENST00000264012 JADE2Q9NQC1 790 aa15.9■□□□□ 0.14
CDH3-201ENST00000264012 ARHGEF25Q86VW2 580 aa15.89■□□□□ 0.13
CDH3-201ENST00000264012 TMEM94Q12767 1356 aa15.89■□□□□ 0.13
CDH3-201ENST00000264012 ZNF532Q9HCE3 1301 aa15.89■□□□□ 0.13
CDH3-201ENST00000264012 CYLC1P35663 651 aaPredicted RBP15.89■□□□□ 0.13
CDH3-201ENST00000264012 CCDC24Q8N4L8 307 aa15.89■□□□□ 0.13
CDH3-201ENST00000264012 MMRN2Q9H8L6 949 aa15.89■□□□□ 0.13
CDH3-201ENST00000264012 GGA1Q9UJY5 639 aa15.89■□□□□ 0.13
CDH3-201ENST00000264012 CCDC174Q6PII3 467 aa15.89■□□□□ 0.13
CDH3-201ENST00000264012 JDP2Q8WYK2 163 aa15.89■□□□□ 0.13
CDH3-201ENST00000264012 TM6SF1Q9BZW5 370 aa15.89■□□□□ 0.13
CDH3-201ENST00000264012 PRR36Q9H6K5 1346 aa15.89■□□□□ 0.13
CDH3-201ENST00000264012 USP6P35125 1406 aa15.89■□□□□ 0.13
CDH3-201ENST00000264012 WDR66Q8TBY9 1149 aa15.89■□□□□ 0.13
CDH3-201ENST00000264012 ELP1O95163 1332 aa15.88■□□□□ 0.13
CDH3-201ENST00000264012 POTEB2H3BUK9 544 aa15.88■□□□□ 0.13
CDH3-201ENST00000264012 OTUD7BQ6GQQ9 843 aa15.88■□□□□ 0.13
CDH3-201ENST00000264012 NAA15Q9BXJ9 866 aaKnown RBP15.88■□□□□ 0.13
CDH3-201ENST00000264012 VWA3AA6NCI4 1184 aa15.88■□□□□ 0.13
CDH3-201ENST00000264012 ZNF174Q15697 407 aa15.88■□□□□ 0.13
CDH3-201ENST00000264012 ANO1Q5XXA6 986 aa15.88■□□□□ 0.13
CDH3-201ENST00000264012 ERBB4Q15303 1308 aa15.88■□□□□ 0.13
CDH3-201ENST00000264012 DTNBO60941 627 aa15.88■□□□□ 0.13
CDH3-201ENST00000264012 BICD1Q96G01 975 aa15.88■□□□□ 0.13
CDH3-201ENST00000264012 DNAI1Q9UI46 699 aa15.88■□□□□ 0.13
CDH3-201ENST00000264012 V9GY48 417 aaPredicted RBP15.88■□□□□ 0.13
CDH3-201ENST00000264012 IBTKQ9P2D0 1353 aaPredicted RBP15.87■□□□□ 0.13
CDH3-201ENST00000264012 CBX1P83916 185 aa15.87■□□□□ 0.13
CDH3-201ENST00000264012 CTNNBL1Q8WYA6 563 aaPredicted RBP15.87■□□□□ 0.13
CDH3-201ENST00000264012 DSCC1Q9BVC3 393 aa15.87■□□□□ 0.13
CDH3-201ENST00000264012 AATFQ9NY61 560 aaKnown RBP eCLIP15.87■□□□□ 0.13
CDH3-201ENST00000264012 IFNKQ9P0W0 207 aa15.87■□□□□ 0.13
CDH3-201ENST00000264012 CTSWP56202 376 aa15.87■□□□□ 0.13
CDH3-201ENST00000264012 RBM26Q5T8P6 1007 aaKnown RBP15.87■□□□□ 0.13
CDH3-201ENST00000264012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.87■□□□□ 0.13
CDH3-201ENST00000264012 ZCCHC11Q5TAX3 1644 aaKnown RBP15.87■□□□□ 0.13
CDH3-201ENST00000264012 CLASP1Q7Z460 1538 aa15.87■□□□□ 0.13
CDH3-201ENST00000264012 NEBLO76041 1014 aa15.87■□□□□ 0.13
CDH3-201ENST00000264012 PRPF4BQ13523 1007 aaKnown RBP15.87■□□□□ 0.13
CDH3-201ENST00000264012 HLTFQ14527 1009 aaKnown RBP eCLIP15.87■□□□□ 0.13
CDH3-201ENST00000264012 DIS3L2Q8IYB7 885 aaKnown RBP15.87■□□□□ 0.13
CDH3-201ENST00000264012 PLIN2Q99541 437 aa15.87■□□□□ 0.13
CDH3-201ENST00000264012 GBP2P32456 591 aaPredicted RBP15.86■□□□□ 0.13
CDH3-201ENST00000264012 CTDSPL2Q05D32 466 aa15.86■□□□□ 0.13
CDH3-201ENST00000264012 GSTTP1A0A1W2PQM5 241 aa15.86■□□□□ 0.13
CDH3-201ENST00000264012 ERICH4A6NGS2 130 aa15.86■□□□□ 0.13
CDH3-201ENST00000264012 MYL10Q9BUA6 226 aa15.86■□□□□ 0.13
CDH3-201ENST00000264012 CCDC172P0C7W6 258 aa15.86■□□□□ 0.13
CDH3-201ENST00000264012 PTGS1P23219 599 aa15.86■□□□□ 0.13
CDH3-201ENST00000264012 LETM2Q2VYF4 491 aa15.86■□□□□ 0.13
CDH3-201ENST00000264012 MPHOSPH6Q99547 160 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms