RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TBX22Q9Y458 520 aa14.26□□□□□ -0.13
CHMP2B-201ENST00000263780 EIF3JO75822 258 aaKnown RBP14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 ATP1A3P13637 1013 aa14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 AXDND1Q5T1B0 1012 aaPredicted RBP14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 LEKR1Q6ZMV7 388 aa14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 DDX46Q7L014 1031 aaKnown RBP14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 HNRNPLLQ8WVV9 542 aaKnown RBP14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 PPP6R2O75170 966 aa14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 ERLIN1O75477 346 aa14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 PTPN12Q05209 780 aaKnown RBP14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 ZMYM1Q5SVZ6 1142 aa14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 METTL22Q9BUU2 404 aaPredicted RBP14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 HSD3B7Q9H2F3 369 aa14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 ADAM21Q9UKJ8 722 aa14.25□□□□□ -0.13
CHMP2B-201ENST00000263780 LMO7Q8WWI1 1683 aa14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 CPLX1O14810 134 aa14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 ACTN2P35609 894 aa14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 DBNDD2Q9BQY9 259 aa14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 TUBBP07437 444 aa14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 HSPD1P10809 573 aaKnown RBP14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 RFX5P48382 616 aaPredicted RBP14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 LONRF2Q1L5Z9 754 aa14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 ELOA2Q8IYF1 753 aaPredicted RBP14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 CEP112Q8N8E3 955 aa14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 CCDC34Q96HJ3 373 aa14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 ZCCHC17Q9NP64 241 aaKnown RBP14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 PAG1Q9NWQ8 432 aa14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 DACH1Q9UI36 760 aa14.24□□□□□ -0.13
CHMP2B-201ENST00000263780 UBR1Q8IWV7 1749 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 FAM237AA0A1B0GTK4 181 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 MYO1CO00159 1063 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 MAP2K7O14733 419 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 LTKP29376 864 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 LMAN1P49257 510 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 TBX2Q13207 712 aaPredicted RBP14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 HDXQ7Z353 690 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 TMEM139Q8IV31 216 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 DPF2Q92785 391 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 SLC26A8Q96RN1 970 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 C19orf44Q9H6X5 657 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 RABL6Q3YEC7 729 aaPredicted RBP14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 FAM177A1Q8N128 213 aaPredicted RBP14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 KCNH5Q8NCM2 988 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 GPR108Q9NPR9 543 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 HPSEQ9Y251 543 aa14.23□□□□□ -0.13
CHMP2B-201ENST00000263780 KIF23Q02241 960 aaPredicted RBP14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 EPHA10Q5JZY3 1008 aa14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 CCDC102BQ68D86 513 aa14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 SPECC1LQ69YQ0 1117 aa14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 GBP3Q9H0R5 595 aa14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 FANCGO15287 622 aa14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 PDIA6Q15084 440 aa14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 SRGAP1Q7Z6B7 1085 aa14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 C14orf37Q86TY3 774 aa14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 PDILTQ8N807 584 aa14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 KIFC2Q96AC6 838 aa14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 WDR24Q96S15 920 aa14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 MYD88Q99836 296 aa14.22□□□□□ -0.13
CHMP2B-201ENST00000263780 GOLIM4O00461 696 aa14.21□□□□□ -0.13
CHMP2B-201ENST00000263780 RNF113AO15541 343 aaKnown RBP14.21□□□□□ -0.13
CHMP2B-201ENST00000263780 SRLQ86TD4 932 aa14.21□□□□□ -0.13
CHMP2B-201ENST00000263780 ACBD3Q9H3P7 528 aa14.21□□□□□ -0.13
CHMP2B-201ENST00000263780 FANCLQ9NW38 375 aa14.21□□□□□ -0.13
CHMP2B-201ENST00000263780 RSPH14Q9UHP6 348 aa14.21□□□□□ -0.13
CHMP2B-201ENST00000263780 RPS6KA5O75582 802 aa14.21□□□□□ -0.14
CHMP2B-201ENST00000263780 USP5P45974 858 aa14.21□□□□□ -0.14
CHMP2B-201ENST00000263780 CHMP4BP1P59074 171 aa14.21□□□□□ -0.14
CHMP2B-201ENST00000263780 FAM69CQ0P6D2 419 aa14.21□□□□□ -0.14
CHMP2B-201ENST00000263780 IMMTQ16891 758 aaKnown RBP14.21□□□□□ -0.14
CHMP2B-201ENST00000263780 OTUD7BQ6GQQ9 843 aa14.21□□□□□ -0.14
CHMP2B-201ENST00000263780 ISM2Q6H9L7 571 aa14.21□□□□□ -0.14
CHMP2B-201ENST00000263780 CCDC12Q8WUD4 166 aaPredicted RBP14.21□□□□□ -0.14
CHMP2B-201ENST00000263780 WDR19Q8NEZ3 1342 aa14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 GOLGA8BA8MQT2 603 aa14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 CUTAO60888 179 aa14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 CDKL5O76039 1030 aa14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 CCDC175P0C221 793 aa14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 NAA15Q9BXJ9 866 aaKnown RBP14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 MKRN1Q9UHC7 482 aaKnown RBP14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 RRP15Q9Y3B9 282 aaKnown RBP14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 NDUFB9Q9Y6M9 179 aa14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 KLF18A0A0U1RQI7 1052 aa14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 TMEM232C9JQI7 657 aa14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 WDHD1O75717 1129 aaPredicted RBP14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 RESP18Q5W5W9 173 aa14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 CPLX2Q6PUV4 134 aaKnown RBP14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 C10orf67Q8IYJ2 551 aa14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 CNNM3Q8NE01 707 aa14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 DHX58Q96C10 678 aa14.2□□□□□ -0.14
CHMP2B-201ENST00000263780 KIF5CO60282 957 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 ANKRD13DQ6ZTN6 518 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 CHST3Q7LGC8 479 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 MLKLQ8NB16 471 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 XAGE3Q8WTP9 111 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 EPC1Q9H2F5 836 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 RAB21Q9UL25 225 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 LAMA4Q16363 1823 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 PRC1O43663 620 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 PPFIA3O75145 1194 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 MARCKSP29966 332 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms