RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 GOLGA6CA6NDK9 693 aa13.59□□□□□ -0.23
SMG6-201ENST00000263073 SNRPA1P09661 255 aaKnown RBP13.59□□□□□ -0.23
SMG6-201ENST00000263073 GOLGA6DP0CG33 693 aa13.59□□□□□ -0.23
SMG6-201ENST00000263073 BEND3Q5T5X7 828 aa13.59□□□□□ -0.23
SMG6-201ENST00000263073 DAAM2Q86T65 1068 aa13.59□□□□□ -0.23
SMG6-201ENST00000263073 GOLGA6AQ9NYA3 693 aa13.59□□□□□ -0.23
SMG6-201ENST00000263073 RNF113AO15541 343 aaKnown RBP13.59□□□□□ -0.23
SMG6-201ENST00000263073 MTX1Q13505 466 aa13.59□□□□□ -0.23
SMG6-201ENST00000263073 STAMQ92783 540 aa13.59□□□□□ -0.23
SMG6-201ENST00000263073 MYL10Q9BUA6 226 aa13.59□□□□□ -0.23
SMG6-201ENST00000263073 BAG3O95817 575 aa13.59□□□□□ -0.23
SMG6-201ENST00000263073 CLNS1AP54105 237 aaKnown RBP13.59□□□□□ -0.23
SMG6-201ENST00000263073 PKP1Q13835 747 aa13.59□□□□□ -0.23
SMG6-201ENST00000263073 DHX32Q7L7V1 743 aaKnown RBP13.59□□□□□ -0.23
SMG6-201ENST00000263073 EHMT1Q9H9B1 1298 aa13.59□□□□□ -0.23
SMG6-201ENST00000263073 BUB1BO60566 1050 aaPredicted RBP13.58□□□□□ -0.23
SMG6-201ENST00000263073 INPP5BP32019 993 aa13.58□□□□□ -0.23
SMG6-201ENST00000263073 LRMPQ12912 555 aa13.58□□□□□ -0.23
SMG6-201ENST00000263073 CCDC77Q9BR77 488 aa13.58□□□□□ -0.23
SMG6-201ENST00000263073 PKD2L1Q9P0L9 805 aa13.58□□□□□ -0.23
SMG6-201ENST00000263073 CLGNO14967 610 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 EIF4A2Q14240 407 aaKnown RBP13.58□□□□□ -0.24
SMG6-201ENST00000263073 KLHL7Q8IXQ5 586 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 NOC4LQ9BVI4 516 aaKnown RBP13.58□□□□□ -0.24
SMG6-201ENST00000263073 WWC3Q9ULE0 1092 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 PLB1Q6P1J6 1458 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 SLC27A2O14975 620 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 POLR2DO15514 142 aaKnown RBP13.58□□□□□ -0.24
SMG6-201ENST00000263073 PTPROQ16827 1216 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 INTS4Q96HW7 963 aaKnown RBP13.58□□□□□ -0.24
SMG6-201ENST00000263073 NAP1L3Q99457 506 aaPredicted RBP13.58□□□□□ -0.24
SMG6-201ENST00000263073 TTLL12Q14166 644 aaPredicted RBP13.58□□□□□ -0.24
SMG6-201ENST00000263073 IFNL2Q8IZJ0 200 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 LRRC27Q9C0I9 530 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 B4E1Z4 1266 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 CCDC172P0C7W6 258 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 RPS6KB1P23443 525 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 ACSBG1Q96GR2 724 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 CLSTN2Q9H4D0 955 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 ATP6V0A2Q9Y487 856 aa13.58□□□□□ -0.24
SMG6-201ENST00000263073 TTC21BQ7Z4L5 1316 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 MAGEB6P1A0A0J9YX57 407 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 ZBTB7BO15156 539 aaPredicted RBP13.57□□□□□ -0.24
SMG6-201ENST00000263073 JAK2O60674 1132 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 ADKP55263 362 aaKnown RBP13.57□□□□□ -0.24
SMG6-201ENST00000263073 CDC5LQ99459 802 aaKnown RBP13.57□□□□□ -0.24
SMG6-201ENST00000263073 NAA16Q6N069 864 aaPredicted RBP13.57□□□□□ -0.24
SMG6-201ENST00000263073 C8orf74Q6P047 294 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 CNNM2Q9H8M5 875 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 ELP1O95163 1332 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 SP4Q02446 784 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 JAKMIP2Q96AA8 810 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 UQCRFS1P1P0C7P4 283 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 TTC19Q6DKK2 380 aaPredicted RBP13.57□□□□□ -0.24
SMG6-201ENST00000263073 CERS3Q8IU89 383 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 CNGA4Q8IV77 575 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 PCK1P35558 622 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 KSR2Q6VAB6 950 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 DDX23Q9BUQ8 820 aaKnown RBP13.57□□□□□ -0.24
SMG6-201ENST00000263073 PLVAPQ9BX97 442 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 STMN4Q9H169 189 aaPredicted RBP13.57□□□□□ -0.24
SMG6-201ENST00000263073 TAB2Q9NYJ8 693 aa13.57□□□□□ -0.24
SMG6-201ENST00000263073 TTC21AQ8NDW8 1320 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 PARD3Q8TEW0 1356 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 hCG_1642624A0A1W2PR95 340 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 INTS8Q75QN2 995 aaKnown RBP13.56□□□□□ -0.24
SMG6-201ENST00000263073 ERMNQ8TAM6 284 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 ANKRD36BQ8N2N9 1353 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 TNNC1P63316 161 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 PTPN21Q16825 1174 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 LETM2Q2VYF4 491 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 DTHD1Q6ZMT9 781 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 PNMA8AQ86V59 439 aaPredicted RBP13.56□□□□□ -0.24
SMG6-201ENST00000263073 LMBR1Q8WVP7 490 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.246e-6■■■□□ 17.8
SMG6-201ENST00000263073 SLF1Q9BQI6 1058 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 SETDB1Q15047 1291 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 CEP85LQ5SZL2 805 aa13.56□□□□□ -0.24
SMG6-201ENST00000263073 ARID4AP29374 1257 aaPredicted RBP13.56□□□□□ -0.24
SMG6-201ENST00000263073 LACTBP83111 547 aaPredicted RBP13.55□□□□□ -0.24
SMG6-201ENST00000263073 ERCC6LQ2NKX8 1250 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 MGARPQ8TDB4 240 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 LEO1Q8WVC0 666 aaPredicted RBP13.55□□□□□ -0.24
SMG6-201ENST00000263073 PHKBQ93100 1093 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 TACO1Q9BSH4 297 aaKnown RBP13.55□□□□□ -0.24
SMG6-201ENST00000263073 DESI2Q9BSY9 194 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 KDM2BQ8NHM5 1336 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 RALGAPBQ86X10 1494 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 FAM13AO94988 1023 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 ZFYP08048 801 aaPredicted RBP13.55□□□□□ -0.24
SMG6-201ENST00000263073 TIMM10P62072 90 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 TBC1D8BQ0IIM8 1120 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 PIK3AP1Q6ZUJ8 805 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 TTC14Q96N46 770 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 C14orf93Q9H972 538 aaKnown RBP13.55□□□□□ -0.24
SMG6-201ENST00000263073 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 BICDL2A1A5D9 508 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 KRT79Q5XKE5 535 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 SEPT14Q6ZU15 432 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 BLZF1Q9H2G9 400 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms