RNA–Protein interactions for RNA: ENST00000261833.11

CIT-201, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIT, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-201ENST00000261833 CCDC40Q4G0X9 1142 aa11.03□□□□□ -0.64
CIT-201ENST00000261833 SH2D4BQ5SQS7 431 aa11.03□□□□□ -0.64
CIT-201ENST00000261833 ZSCAN29Q8IWY8 852 aaPredicted RBP11.03□□□□□ -0.64
CIT-201ENST00000261833 CCDC26Q8TAB7 109 aa11.03□□□□□ -0.64
CIT-201ENST00000261833 C14orf93Q9H972 538 aaKnown RBP11.03□□□□□ -0.64
CIT-201ENST00000261833 NPATQ14207 1427 aa11.03□□□□□ -0.64
CIT-201ENST00000261833 USP32Q8NFA0 1604 aa11.03□□□□□ -0.64
CIT-201ENST00000261833 EHMT1Q9H9B1 1298 aa11.03□□□□□ -0.64
CIT-201ENST00000261833 ARHGEF28Q8N1W1 1705 aaKnown RBP11.03□□□□□ -0.64
CIT-201ENST00000261833 TAOK1Q7L7X3 1001 aa11.02□□□□□ -0.64
CIT-201ENST00000261833 DDX54Q8TDD1 881 aaKnown RBP11.02□□□□□ -0.64
CIT-201ENST00000261833 MYD88Q99836 296 aa11.02□□□□□ -0.64
CIT-201ENST00000261833 CWC25Q9NXE8 425 aaPredicted RBP11.02□□□□□ -0.64
CIT-201ENST00000261833 AKR1B10O60218 316 aa11.02□□□□□ -0.64
CIT-201ENST00000261833 PPP1R2P41236 205 aa11.02□□□□□ -0.64
CIT-201ENST00000261833 WDR78Q5VTH9 848 aa11.02□□□□□ -0.65
CIT-201ENST00000261833 CCDC144CPQ8IYA2 1237 aa11.02□□□□□ -0.65
CIT-201ENST00000261833 ADGRF5Q8IZF2 1346 aa11.02□□□□□ -0.65
CIT-201ENST00000261833 GRM8O00222 908 aa11.02□□□□□ -0.65
CIT-201ENST00000261833 CCDC42Q96M95 316 aa11.02□□□□□ -0.65
CIT-201ENST00000261833 WASLO00401 505 aaPredicted RBP11.02□□□□□ -0.65
CIT-201ENST00000261833 NDUFAB1O14561 156 aa11.02□□□□□ -0.65
CIT-201ENST00000261833 WTAPQ15007 396 aa11.02□□□□□ -0.65
CIT-201ENST00000261833 SETDB1Q15047 1291 aa11.02□□□□□ -0.65
CIT-201ENST00000261833 RAB3IPQ96QF0 476 aaPredicted RBP11.02□□□□□ -0.65
CIT-201ENST00000261833 MKNK2Q9HBH9 465 aa11.02□□□□□ -0.65
CIT-201ENST00000261833 SPINK5Q9NQ38 1064 aaPredicted RBP11.02□□□□□ -0.65
CIT-201ENST00000261833 CTNNA2P26232 953 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 IFIT1BQ5T764 474 aaKnown RBP11.01□□□□□ -0.65
CIT-201ENST00000261833 STIM2Q9P246 746 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 EDC4Q6P2E9 1401 aaKnown RBP11.01□□□□□ -0.65
CIT-201ENST00000261833 RRAGBQ5VZM2 374 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 NEK11Q8NG66 645 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 MARCKSP29966 332 aaPredicted RBP11.01□□□□□ -0.65
CIT-201ENST00000261833 LMNTD2Q8IXW0 634 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 GPT2Q8TD30 523 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 DRC1Q96MC2 740 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 NUP58Q9BVL2 599 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 MICAL3Q7RTP6 2002 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 CCDC38Q502W7 563 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 IQCDQ96DY2 449 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 LUC7L2Q9Y383 392 aaKnown RBP11.01□□□□□ -0.65
CIT-201ENST00000261833 AFMP43652 599 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 CROCCP2Q86T23 111 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 FAM71BQ8TC56 605 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 UBLCP1Q8WVY7 318 aaPredicted RBP11.01□□□□□ -0.65
CIT-201ENST00000261833 MTRF1LQ9UGC7 380 aaKnown RBP11.01□□□□□ -0.65
CIT-201ENST00000261833 BRF1Q92994 677 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 ABCC10Q5T3U5 1492 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 CCDC122Q5T0U0 273 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 DHX32Q7L7V1 743 aaKnown RBP11.01□□□□□ -0.65
CIT-201ENST00000261833 CCDC77Q9BR77 488 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 PAG1Q9NWQ8 432 aa11.01□□□□□ -0.65
CIT-201ENST00000261833 CLGNO14967 610 aa11□□□□□ -0.65
CIT-201ENST00000261833 LUC7L3O95232 432 aaKnown RBP11□□□□□ -0.65
CIT-201ENST00000261833 SETSIPP0DME0 302 aa11□□□□□ -0.65
CIT-201ENST00000261833 CALML3P27482 149 aa11□□□□□ -0.65
CIT-201ENST00000261833 KLF18A0A0U1RQI7 1052 aa11□□□□□ -0.65
CIT-201ENST00000261833 GNAT2P19087 354 aa11□□□□□ -0.65
CIT-201ENST00000261833 FERMT1Q9BQL6 677 aa11□□□□□ -0.65
CIT-201ENST00000261833 A0A1W2PP64 1363 aa11□□□□□ -0.65
CIT-201ENST00000261833 MAP3K5Q99683 1374 aa11□□□□□ -0.65
CIT-201ENST00000261833 CD109Q6YHK3 1445 aa11□□□□□ -0.65
CIT-201ENST00000261833 WDR7Q9Y4E6 1490 aa11□□□□□ -0.65
CIT-201ENST00000261833 NBPF7P0C2Y1 421 aaPredicted RBP11□□□□□ -0.65
CIT-201ENST00000261833 NLRP12P59046 1061 aa11□□□□□ -0.65
CIT-201ENST00000261833 KARSQ15046 597 aaKnown RBP11□□□□□ -0.65
CIT-201ENST00000261833 TSNAXIP1Q2TAA8 658 aa11□□□□□ -0.65
CIT-201ENST00000261833 SLF2Q8IX21 1173 aa11□□□□□ -0.65
CIT-201ENST00000261833 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
CIT-201ENST00000261833 PHLPP2Q6ZVD8 1323 aa11□□□□□ -0.65
CIT-201ENST00000261833 LOXHD1Q8IVV2 1947 aa11□□□□□ -0.65
CIT-201ENST00000261833 CDC42BPGQ6DT37 1551 aa11□□□□□ -0.65
CIT-201ENST00000261833 RANBP6O60518 1105 aaKnown RBP11□□□□□ -0.65
CIT-201ENST00000261833 IDEP14735 1019 aa11□□□□□ -0.65
CIT-201ENST00000261833 SLC8A1P32418 973 aa11□□□□□ -0.65
CIT-201ENST00000261833 CLNS1AP54105 237 aaKnown RBP11□□□□□ -0.65
CIT-201ENST00000261833 CACNA2D3Q8IZS8 1091 aa11□□□□□ -0.65
CIT-201ENST00000261833 STMN2Q93045 179 aa11□□□□□ -0.65
CIT-201ENST00000261833 LTN1O94822 1766 aa11□□□□□ -0.65
CIT-201ENST00000261833 TESK2Q96S53 571 aa11□□□□□ -0.65
CIT-201ENST00000261833 PAIP2Q9BPZ3 127 aaKnown RBP11□□□□□ -0.65
CIT-201ENST00000261833 ATP2A1O14983 1001 aa11□□□□□ -0.65
CIT-201ENST00000261833 ATP8B1O43520 1251 aa11□□□□□ -0.65
CIT-201ENST00000261833 RUFY4Q6ZNE9 571 aa11□□□□□ -0.65
CIT-201ENST00000261833 BICDL1Q6ZP65 573 aa11□□□□□ -0.65
CIT-201ENST00000261833 EFCAB13Q8IY85 973 aa11□□□□□ -0.65
CIT-201ENST00000261833 IQCGQ9H095 443 aaKnown RBP11□□□□□ -0.65
CIT-201ENST00000261833 PHACTR2O75167 634 aa11□□□□□ -0.65
CIT-201ENST00000261833 USP5P45974 858 aa11□□□□□ -0.65
CIT-201ENST00000261833 SEPT6Q14141 434 aa11□□□□□ -0.65
CIT-201ENST00000261833 PPRC1Q5VV67 1664 aaKnown RBP11□□□□□ -0.65
CIT-201ENST00000261833 IGSF22Q8N9C0 903 aa11□□□□□ -0.65
CIT-201ENST00000261833 RNF216Q9NWF9 866 aaPredicted RBP11□□□□□ -0.65
CIT-201ENST00000261833 MYOM1P52179 1685 aa10.99□□□□□ -0.65
CIT-201ENST00000261833 ZBTB7BO15156 539 aaPredicted RBP10.99□□□□□ -0.65
CIT-201ENST00000261833 MYOM2P54296 1465 aa10.99□□□□□ -0.65
CIT-201ENST00000261833 IGSF3O75054 1194 aa10.99□□□□□ -0.65
CIT-201ENST00000261833 NEBLO76041 1014 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms