RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 LRRFIP1Q32MZ4 808 aaKnown RBP19.06■□□□□ 0.64
TM9SF1-201ENST00000261789 PIGBQ92521 554 aa19.06■□□□□ 0.64
TM9SF1-201ENST00000261789 RIPOR2Q9Y4F9 1068 aa19.06■□□□□ 0.64
TM9SF1-201ENST00000261789 IDH1O75874 414 aaKnown RBP19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 APPP05067 770 aa19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 SKILP12757 684 aa19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 MARCKSP29966 332 aaPredicted RBP19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 TICAM2Q86XR7 235 aa19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 TBC1D10CQ8IV04 446 aa19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 PKNOX2Q96KN3 472 aa19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 TRMT1Q9NXH9 659 aaKnown RBP19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 SPEF2Q9C093 1822 aa19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 TNS2Q63HR2 1409 aa19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 NEDD4P46934 1319 aa19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 CTIFO43310 598 aaKnown RBP19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 CBX1P83916 185 aa19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 CYB5R4Q7L1T6 521 aa19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 CARD10Q9BWT7 1032 aa19.05■□□□□ 0.64
TM9SF1-201ENST00000261789 RIC1Q4ADV7 1423 aa19.04■□□□□ 0.64
TM9SF1-201ENST00000261789 CCDC69A6NI79 296 aa19.04■□□□□ 0.64
TM9SF1-201ENST00000261789 DHX16O60231 1041 aaKnown RBP19.04■□□□□ 0.64
TM9SF1-201ENST00000261789 TTLL11Q8NHH1 800 aa19.04■□□□□ 0.64
TM9SF1-201ENST00000261789 PIH1D3Q9NQM4 214 aaKnown RBP19.04■□□□□ 0.64
TM9SF1-201ENST00000261789 CNNM1Q9NRU3 951 aa19.04■□□□□ 0.64
TM9SF1-201ENST00000261789 KIAA1468Q9P260 1216 aa19.04■□□□□ 0.64
TM9SF1-201ENST00000261789 SYNE3Q6ZMZ3 975 aa19.03■□□□□ 0.64
TM9SF1-201ENST00000261789 PDCL2Q8N4E4 241 aa19.03■□□□□ 0.64
TM9SF1-201ENST00000261789 PHKBQ93100 1093 aa19.03■□□□□ 0.64
TM9SF1-201ENST00000261789 SPDYE4A6NLX3 237 aa19.03■□□□□ 0.64
TM9SF1-201ENST00000261789 UBE2Q2LH0YL09 131 aa19.03■□□□□ 0.64
TM9SF1-201ENST00000261789 KIF23Q02241 960 aaPredicted RBP19.03■□□□□ 0.64
TM9SF1-201ENST00000261789 TRIM28Q13263 835 aaKnown RBP19.03■□□□□ 0.64
TM9SF1-201ENST00000261789 HELBQ8NG08 1087 aaPredicted RBP19.03■□□□□ 0.64
TM9SF1-201ENST00000261789 POLR3EQ9NVU0 708 aa19.03■□□□□ 0.64
TM9SF1-201ENST00000261789 MYO5AQ9Y4I1 1855 aaKnown RBP19.03■□□□□ 0.64
TM9SF1-201ENST00000261789 A0A1W2PQ27 194 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 A0A1W2PQ64 194 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 A0A1W2PQD8 194 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 WDHD1O75717 1129 aaPredicted RBP19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 ZNF202O95125 648 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 ADD2P35612 726 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 NBPF11Q86T75 865 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 KCNG4Q8TDN1 519 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 PAPPAQ13219 1627 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 B4E1Z4 1266 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 SNAP23O00161 211 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 CCZ1BP86790 482 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 CCZ1P86791 482 aaPredicted RBP19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 ANO1Q5XXA6 986 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 NLRP10Q86W26 655 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 ANKRD7Q92527 254 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 MYL10Q9BUA6 226 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 SLAIN2Q9P270 581 aa19.02■□□□□ 0.64
TM9SF1-201ENST00000261789 MROH7-TTC4A0A0A0MT08 1334 aa19.02■□□□□ 0.63
TM9SF1-201ENST00000261789 CDC27P30260 824 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 PHKA1P46020 1223 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 NCBP1Q09161 790 aaKnown RBP19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 PLA2G12BQ9BX93 195 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 NAT10Q9H0A0 1025 aaKnown RBP19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 FBXO3Q9UK99 471 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 SMTNL1A8MU46 457 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 YEATS4O95619 227 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 PFKFB1P16118 471 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 U2AF2P26368 475 aaKnown RBP eCLIP19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 TRDNQ13061 729 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 AXDND1Q5T1B0 1012 aaPredicted RBP19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 CEP135Q66GS9 1140 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 GIGYF2Q6Y7W6 1299 aaKnown RBP19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 MICU3Q86XE3 530 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 WWC3Q9ULE0 1092 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 SHANK3Q9BYB0 1731 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 MAP3K15Q6ZN16 1313 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 ZNF532Q9HCE3 1301 aa19.01■□□□□ 0.63
TM9SF1-201ENST00000261789 SLC3A2P08195 630 aaKnown RBP19■□□□□ 0.63
TM9SF1-201ENST00000261789 ZRSR1Q15695 479 aaKnown RBP19■□□□□ 0.63
TM9SF1-201ENST00000261789 CHMP4CQ96CF2 233 aa19■□□□□ 0.63
TM9SF1-201ENST00000261789 ANGEL1Q9UNK9 670 aaKnown RBP19■□□□□ 0.63
TM9SF1-201ENST00000261789 AKAP11Q9UKA4 1901 aa19■□□□□ 0.63
TM9SF1-201ENST00000261789 METAP2P50579 478 aaKnown RBP eCLIP19■□□□□ 0.63
TM9SF1-201ENST00000261789 CTSWP56202 376 aa19■□□□□ 0.63
TM9SF1-201ENST00000261789 RBM6P78332 1123 aaKnown RBP19■□□□□ 0.63
TM9SF1-201ENST00000261789 BRAPQ7Z569 592 aa19■□□□□ 0.63
TM9SF1-201ENST00000261789 ALG1Q9BT22 464 aa19■□□□□ 0.63
TM9SF1-201ENST00000261789 TOGARAM1Q9Y4F4 1720 aa19■□□□□ 0.63
TM9SF1-201ENST00000261789 SOS2Q07890 1332 aaPredicted RBP19■□□□□ 0.63
TM9SF1-201ENST00000261789 IRS4O14654 1257 aaPredicted RBP18.99■□□□□ 0.63
TM9SF1-201ENST00000261789 SMC2O95347 1197 aa18.99■□□□□ 0.63
TM9SF1-201ENST00000261789 XPO4Q9C0E2 1151 aaKnown RBP18.99■□□□□ 0.63
TM9SF1-201ENST00000261789 IFNKQ9P0W0 207 aa18.99■□□□□ 0.63
TM9SF1-201ENST00000261789 ANKRD18BA2A2Z9 1011 aa18.99■□□□□ 0.63
TM9SF1-201ENST00000261789 STARD3NLO95772 234 aa18.99■□□□□ 0.63
TM9SF1-201ENST00000261789 CCDC102BQ68D86 513 aa18.99■□□□□ 0.63
TM9SF1-201ENST00000261789 VGLL2Q8N8G2 317 aa18.99■□□□□ 0.63
TM9SF1-201ENST00000261789 CCDC112Q8NEF3 446 aa18.99■□□□□ 0.63
TM9SF1-201ENST00000261789 SLC4A9Q96Q91 983 aa18.99■□□□□ 0.63
TM9SF1-201ENST00000261789 TRMT112Q9UI30 125 aaKnown RBP18.99■□□□□ 0.63
TM9SF1-201ENST00000261789 MYH7P12883 1935 aa18.99■□□□□ 0.63
TM9SF1-201ENST00000261789 VPS37DQ86XT2 251 aa18.98■□□□□ 0.63
TM9SF1-201ENST00000261789 SYTL4Q96C24 671 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms