RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 ZNF710Q8N1W2 664 aa22.41■■□□□ 1.18
COL4A3BP-201ENST00000261415 A0A0G2JLW4 131 aa22.41■■□□□ 1.18
COL4A3BP-201ENST00000261415 DNTTIP2Q5QJE6 756 aaKnown RBP22.41■■□□□ 1.18
COL4A3BP-201ENST00000261415 MPNDQ8N594 471 aa22.41■■□□□ 1.18
COL4A3BP-201ENST00000261415 KCNA3P22001 575 aa22.4■■□□□ 1.18
COL4A3BP-201ENST00000261415 MED23Q9ULK4 1368 aa22.4■■□□□ 1.18
COL4A3BP-201ENST00000261415 SLC20A2Q08357 652 aa22.4■■□□□ 1.18
COL4A3BP-201ENST00000261415 NMIQ13287 307 aaPredicted RBP22.4■■□□□ 1.18
COL4A3BP-201ENST00000261415 TTF1Q15361 905 aaPredicted RBP22.4■■□□□ 1.18
COL4A3BP-201ENST00000261415 TICAM2Q86XR7 235 aa22.4■■□□□ 1.18
COL4A3BP-201ENST00000261415 RBSNQ9H1K0 784 aa22.4■■□□□ 1.18
COL4A3BP-201ENST00000261415 C6orf229H3BNL8 230 aa22.39■■□□□ 1.17
COL4A3BP-201ENST00000261415 SGSM2O43147 1006 aa22.39■■□□□ 1.17
COL4A3BP-201ENST00000261415 REC8O95072 547 aa22.39■■□□□ 1.17
COL4A3BP-201ENST00000261415 TGFB2P61812 414 aa22.39■■□□□ 1.17
COL4A3BP-201ENST00000261415 ZSCAN23Q3MJ62 389 aa22.39■■□□□ 1.17
COL4A3BP-201ENST00000261415 DPP8Q6V1X1 898 aaPredicted RBP22.39■■□□□ 1.17
COL4A3BP-201ENST00000261415 RUFY2Q8WXA3 655 aa22.39■■□□□ 1.17
COL4A3BP-201ENST00000261415 FAM227BQ96M60 508 aa22.39■■□□□ 1.17
COL4A3BP-201ENST00000261415 TTLL6Q8N841 843 aa22.38■■□□□ 1.17
COL4A3BP-201ENST00000261415 A0A0D9SFI3 127 aa22.38■■□□□ 1.17
COL4A3BP-201ENST00000261415 SEMA3EO15041 775 aa22.38■■□□□ 1.17
COL4A3BP-201ENST00000261415 CHGBP05060 677 aa22.38■■□□□ 1.17
COL4A3BP-201ENST00000261415 C7orf43Q8WVR3 580 aa22.38■■□□□ 1.17
COL4A3BP-201ENST00000261415 PIH1D3Q9NQM4 214 aaKnown RBP22.38■■□□□ 1.17
COL4A3BP-201ENST00000261415 MAST2Q6P0Q8 1798 aa22.37■■□□□ 1.17
COL4A3BP-201ENST00000261415 SNED1Q8TER0 1413 aa22.37■■□□□ 1.17
COL4A3BP-201ENST00000261415 VGLL3A8MV65 326 aa22.37■■□□□ 1.17
COL4A3BP-201ENST00000261415 ZNF804AQ7Z570 1209 aa22.37■■□□□ 1.17
COL4A3BP-201ENST00000261415 ZNF219Q9P2Y4 722 aaPredicted RBP22.37■■□□□ 1.17
COL4A3BP-201ENST00000261415 DENND2AQ9ULE3 1009 aa22.37■■□□□ 1.17
COL4A3BP-201ENST00000261415 KIF3AQ9Y496 699 aa22.37■■□□□ 1.17
COL4A3BP-201ENST00000261415 BAG4O95429 457 aaKnown RBP22.37■■□□□ 1.17
COL4A3BP-201ENST00000261415 CGNQ9P2M7 1197 aaKnown RBP22.37■■□□□ 1.17
COL4A3BP-201ENST00000261415 RAD50Q92878 1312 aa22.36■■□□□ 1.17
COL4A3BP-201ENST00000261415 PAXIP1Q6ZW49 1069 aaPredicted RBP22.36■■□□□ 1.17
COL4A3BP-201ENST00000261415 PPP1R1BQ9UD71 204 aaPredicted RBP22.36■■□□□ 1.17
COL4A3BP-201ENST00000261415 ZBTB22O15209 634 aa22.36■■□□□ 1.17
COL4A3BP-201ENST00000261415 PDS5AQ29RF7 1337 aaKnown RBP22.35■■□□□ 1.17
COL4A3BP-201ENST00000261415 LRRFIP1Q32MZ4 808 aaKnown RBP22.35■■□□□ 1.17
COL4A3BP-201ENST00000261415 FEZ1Q99689 392 aa22.35■■□□□ 1.17
COL4A3BP-201ENST00000261415 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.35■■□□□ 1.176e-7■□□□□ 10.9
COL4A3BP-201ENST00000261415 ANO2Q9NQ90 1003 aa22.35■■□□□ 1.17
COL4A3BP-201ENST00000261415 CD2APQ9Y5K6 639 aa22.35■■□□□ 1.17
COL4A3BP-201ENST00000261415 RNF113AO15541 343 aaKnown RBP22.34■■□□□ 1.17
COL4A3BP-201ENST00000261415 IDH1O75874 414 aaKnown RBP22.34■■□□□ 1.17
COL4A3BP-201ENST00000261415 SLFNL1Q499Z3 407 aa22.34■■□□□ 1.17
COL4A3BP-201ENST00000261415 KLHL34Q8N239 644 aa22.34■■□□□ 1.17
COL4A3BP-201ENST00000261415 USP26Q9BXU7 913 aa22.34■■□□□ 1.17
COL4A3BP-201ENST00000261415 FER1L6Q2WGJ9 1857 aa22.34■■□□□ 1.17
COL4A3BP-201ENST00000261415 ARFGEF1Q9Y6D6 1849 aa22.34■■□□□ 1.17
COL4A3BP-201ENST00000261415 C21orf2O43822 256 aa22.34■■□□□ 1.17
COL4A3BP-201ENST00000261415 ZFYP08048 801 aaPredicted RBP22.34■■□□□ 1.17
COL4A3BP-201ENST00000261415 CC2D2BQ6DHV5 1058 aa22.34■■□□□ 1.17
COL4A3BP-201ENST00000261415 SPON1Q9HCB6 807 aa22.34■■□□□ 1.17
COL4A3BP-201ENST00000261415 PDCL2Q8N4E4 241 aa22.33■■□□□ 1.17
COL4A3BP-201ENST00000261415 TDRD7Q8NHU6 1098 aaKnown RBP22.33■■□□□ 1.17
COL4A3BP-201ENST00000261415 WASHC4Q2M389 1173 aa22.33■■□□□ 1.16
COL4A3BP-201ENST00000261415 CAVIN1Q6NZI2 390 aaKnown RBP22.33■■□□□ 1.16
COL4A3BP-201ENST00000261415 CD209Q9NNX6 404 aa22.33■■□□□ 1.16
COL4A3BP-201ENST00000261415 PIM2Q9P1W9 311 aa22.33■■□□□ 1.16
COL4A3BP-201ENST00000261415 RIMBP2O15034 1052 aa22.32■■□□□ 1.16
COL4A3BP-201ENST00000261415 ZMYM1Q5SVZ6 1142 aa22.32■■□□□ 1.16
COL4A3BP-201ENST00000261415 ZSCAN25Q6NSZ9 544 aa22.32■■□□□ 1.16
COL4A3BP-201ENST00000261415 ZNF771Q7L3S4 317 aaPredicted RBP22.32■■□□□ 1.16
COL4A3BP-201ENST00000261415 SEC62Q99442 399 aaKnown RBP22.32■■□□□ 1.16
COL4A3BP-201ENST00000261415 ZNF646O15015 1829 aaPredicted RBP22.32■■□□□ 1.16
COL4A3BP-201ENST00000261415 K7ELQ4 463 aaPredicted RBP22.32■■□□□ 1.16
COL4A3BP-201ENST00000261415 IL1R1P14778 569 aa22.32■■□□□ 1.16
COL4A3BP-201ENST00000261415 SLC9C2Q5TAH2 1124 aa22.32■■□□□ 1.16
COL4A3BP-201ENST00000261415 PLCD3Q8N3E9 789 aa22.32■■□□□ 1.16
COL4A3BP-201ENST00000261415 ZC3H12CQ9C0D7 883 aaKnown RBP22.32■■□□□ 1.16
COL4A3BP-201ENST00000261415 SCN9AQ15858 1988 aa22.31■■□□□ 1.16
COL4A3BP-201ENST00000261415 ADD2P35612 726 aa22.31■■□□□ 1.16
COL4A3BP-201ENST00000261415 MAP3K12Q12852 859 aa22.31■■□□□ 1.16
COL4A3BP-201ENST00000261415 MCMDC2Q4G0Z9 681 aa22.31■■□□□ 1.16
COL4A3BP-201ENST00000261415 ZNF589Q86UQ0 364 aaPredicted RBP22.31■■□□□ 1.16
COL4A3BP-201ENST00000261415 EYA3Q99504 573 aa22.31■■□□□ 1.16
COL4A3BP-201ENST00000261415 RTFDC1Q9BY42 306 aaPredicted RBP22.31■■□□□ 1.16
COL4A3BP-201ENST00000261415 HELLSQ9NRZ9 838 aa22.31■■□□□ 1.16
COL4A3BP-201ENST00000261415 WWC3Q9ULE0 1092 aa22.31■■□□□ 1.16
COL4A3BP-201ENST00000261415 GABPB1Q06547 395 aaPredicted RBP22.31■■□□□ 1.16
COL4A3BP-201ENST00000261415 CHAF1AQ13111 956 aaPredicted RBP22.31■■□□□ 1.16
COL4A3BP-201ENST00000261415 ABCF2Q9UG63 623 aa22.31■■□□□ 1.16
COL4A3BP-201ENST00000261415 PSME4Q14997 1843 aa22.3■■□□□ 1.16
COL4A3BP-201ENST00000261415 MYH2Q9UKX2 1941 aa22.3■■□□□ 1.16
COL4A3BP-201ENST00000261415 CCDC93Q567U6 631 aa22.3■■□□□ 1.16
COL4A3BP-201ENST00000261415 LSG1Q9H089 658 aaKnown RBP22.3■■□□□ 1.16
COL4A3BP-201ENST00000261415 LRP2BPQ9P2M1 347 aa22.3■■□□□ 1.16
COL4A3BP-201ENST00000261415 CCDC66A2RUB6 948 aa22.29■■□□□ 1.16
COL4A3BP-201ENST00000261415 MAST3O60307 1309 aa22.29■■□□□ 1.16
COL4A3BP-201ENST00000261415 PDE6AP16499 860 aa22.29■■□□□ 1.16
COL4A3BP-201ENST00000261415 APPBP2Q92624 585 aa22.29■■□□□ 1.16
COL4A3BP-201ENST00000261415 EPB41L2O43491 1005 aaKnown RBP22.29■■□□□ 1.16
COL4A3BP-201ENST00000261415 PTMAP06454 111 aaKnown RBP22.29■■□□□ 1.16
COL4A3BP-201ENST00000261415 UBE3CQ15386 1083 aa22.29■■□□□ 1.16
COL4A3BP-201ENST00000261415 GRIPAP1Q4V328 841 aa22.29■■□□□ 1.16
COL4A3BP-201ENST00000261415 CCDC129Q6ZRS4 1044 aa22.29■■□□□ 1.16
COL4A3BP-201ENST00000261415 COA1Q9GZY4 146 aa22.29■■□□□ 1.16
COL4A3BP-201ENST00000261415 JAG2Q9Y219 1238 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms