RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 KARSQ15046 597 aaKnown RBP18.37■□□□□ 0.53
LMNB1-201ENST00000261366 AMOTQ4VCS5 1084 aa18.37■□□□□ 0.53
LMNB1-201ENST00000261366 ZNF496Q96IT1 587 aaPredicted RBP18.37■□□□□ 0.53
LMNB1-201ENST00000261366 SYKP43405 635 aa18.37■□□□□ 0.53
LMNB1-201ENST00000261366 ADKP55263 362 aaKnown RBP18.37■□□□□ 0.53
LMNB1-201ENST00000261366 HSD3B7Q9H2F3 369 aa18.37■□□□□ 0.53
LMNB1-201ENST00000261366 A0A1W2PQ27 194 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 A0A1W2PQ64 194 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 A0A1W2PQD8 194 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 TADA3O75528 432 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 ANO1Q5XXA6 986 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 TRIM34Q9BYJ4 488 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 DENND2AQ9ULE3 1009 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 PARP3Q9Y6F1 533 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 IFIT1P09914 478 aaKnown RBP18.36■□□□□ 0.53
LMNB1-201ENST00000261366 KRBA2Q6ZNG9 492 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 FBXO18Q8NFZ0 1043 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 CABLES1Q8TDN4 633 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 PRC1O43663 620 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 ZRANB2O95218 330 aaKnown RBP eCLIP18.36■□□□□ 0.53
LMNB1-201ENST00000261366 LRRC24Q50LG9 513 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 REXO1L1PQ8IX06 675 aa18.36■□□□□ 0.53
LMNB1-201ENST00000261366 FOXN1O15353 648 aa18.35■□□□□ 0.53
LMNB1-201ENST00000261366 ATL3Q6DD88 541 aa18.35■□□□□ 0.53
LMNB1-201ENST00000261366 OSBP2Q969R2 916 aa18.35■□□□□ 0.53
LMNB1-201ENST00000261366 ZNF274Q96GC6 653 aaPredicted RBP18.35■□□□□ 0.53
LMNB1-201ENST00000261366 IRX2Q9BZI1 471 aaPredicted RBP18.35■□□□□ 0.53
LMNB1-201ENST00000261366 KCND1Q9NSA2 647 aa18.35■□□□□ 0.53
LMNB1-201ENST00000261366 HSPA2P54652 639 aa18.35■□□□□ 0.53
LMNB1-201ENST00000261366 AXDND1Q5T1B0 1012 aaPredicted RBP18.35■□□□□ 0.53
LMNB1-201ENST00000261366 PPP2R2CQ9Y2T4 447 aa18.35■□□□□ 0.53
LMNB1-201ENST00000261366 C1orf167Q5SNV9 1468 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 ZNF827Q17R98 1081 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 PHKBQ93100 1093 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 SH3TC1Q8TE82 1336 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 VWA3AA6NCI4 1184 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 UBE2Q2LH0YL09 131 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 CASQ1P31415 396 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 MYL5Q02045 173 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 RAD51AP2Q09MP3 1159 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 ZMYM1Q5SVZ6 1142 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 TOGARAM2Q6ZUX3 1019 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 TRMT44Q8IYL2 757 aaKnown RBP18.34■□□□□ 0.53
LMNB1-201ENST00000261366 DSCC1Q9BVC3 393 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 POLR3EQ9NVU0 708 aa18.34■□□□□ 0.53
LMNB1-201ENST00000261366 PHLPP2Q6ZVD8 1323 aa18.33■□□□□ 0.53
LMNB1-201ENST00000261366 RGPD2P0DJD1 1756 aa18.33■□□□□ 0.53
LMNB1-201ENST00000261366 USP54Q70EL1 1684 aa18.33■□□□□ 0.52
LMNB1-201ENST00000261366 TBC1D8O95759 1140 aa18.33■□□□□ 0.52
LMNB1-201ENST00000261366 CDC27P30260 824 aa18.33■□□□□ 0.52
LMNB1-201ENST00000261366 SMC1AQ14683 1233 aaKnown RBP18.33■□□□□ 0.52
LMNB1-201ENST00000261366 LRRFIP1Q32MZ4 808 aaKnown RBP18.33■□□□□ 0.52
LMNB1-201ENST00000261366 HELLSQ9NRZ9 838 aa18.33■□□□□ 0.52
LMNB1-201ENST00000261366 NLRP2Q9NX02 1062 aa18.33■□□□□ 0.52
LMNB1-201ENST00000261366 TMEM94Q12767 1356 aa18.33■□□□□ 0.52
LMNB1-201ENST00000261366 NCAPD2Q15021 1401 aa18.33■□□□□ 0.52
LMNB1-201ENST00000261366 KDM3BQ7LBC6 1761 aa18.33■□□□□ 0.52
LMNB1-201ENST00000261366 YEATS4O95619 227 aa18.32■□□□□ 0.52
LMNB1-201ENST00000261366 PI16Q6UXB8 463 aa18.32■□□□□ 0.52
LMNB1-201ENST00000261366 AGXT2Q9BYV1 514 aa18.32■□□□□ 0.52
LMNB1-201ENST00000261366 RNF113AO15541 343 aaKnown RBP18.32■□□□□ 0.52
LMNB1-201ENST00000261366 KIF23Q02241 960 aaPredicted RBP18.32■□□□□ 0.52
LMNB1-201ENST00000261366 PPP2R3AQ06190 1150 aa18.32■□□□□ 0.52
LMNB1-201ENST00000261366 PDE4BQ07343 736 aa18.32■□□□□ 0.52
LMNB1-201ENST00000261366 BPIFA3Q9BQP9 254 aa18.32■□□□□ 0.52
LMNB1-201ENST00000261366 PUS3Q9BZE2 481 aaKnown RBP18.32■□□□□ 0.52
LMNB1-201ENST00000261366 MED1Q15648 1581 aaPredicted RBP18.32■□□□□ 0.52
LMNB1-201ENST00000261366 CC2D1AQ6P1N0 951 aaPredicted RBP18.32■□□□□ 0.52
LMNB1-201ENST00000261366 SHC4Q6S5L8 630 aa18.32■□□□□ 0.52
LMNB1-201ENST00000261366 OLFM4Q6UX06 510 aa18.32■□□□□ 0.52
LMNB1-201ENST00000261366 RALYLQ86SE5 291 aaKnown RBP18.32■□□□□ 0.52
LMNB1-201ENST00000261366 HPS5Q9UPZ3 1129 aa18.32■□□□□ 0.52
LMNB1-201ENST00000261366 EFCAB8A8MWE9 144 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 ATP2B1P20020 1258 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 CMA1P23946 247 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 LMAN1P49257 510 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 MTF1Q14872 753 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 LONRF3Q496Y0 759 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 CPLX3Q8WVH0 158 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 MYL10Q9BUA6 226 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 PARD6BQ9BYG5 372 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 LZTFL1Q9NQ48 299 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 PUF60Q9UHX1 559 aaKnown RBP18.31■□□□□ 0.52
LMNB1-201ENST00000261366 PALLDQ8WX93 1383 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 FGAP02671 866 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 VSTM4Q8IW00 320 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 DHX58Q96C10 678 aa18.31■□□□□ 0.52
LMNB1-201ENST00000261366 BAG1Q99933 345 aaPredicted RBP18.31■□□□□ 0.52
LMNB1-201ENST00000261366 ZNF330Q9Y3S2 320 aaPredicted RBP18.31■□□□□ 0.52
LMNB1-201ENST00000261366 A0A1B0GUL7 405 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 TFRCP02786 760 aaKnown RBP18.3■□□□□ 0.52
LMNB1-201ENST00000261366 CHRNA2Q15822 529 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 MICU3Q86XE3 530 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 VPS37DQ86XT2 251 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 FOXP4Q8IVH2 680 aaPredicted RBP18.3■□□□□ 0.52
LMNB1-201ENST00000261366 TTC5Q8N0Z6 440 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 NKX2-3Q8TAU0 364 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 ALG1Q9BT22 464 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 INTS13Q9NVM9 706 aa18.3■□□□□ 0.52
LMNB1-201ENST00000261366 PCDHA5Q9Y5H7 936 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms