RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 NUTM2AQ8IVF1 878 aaPredicted RBP11□□□□□ -0.65
CTDSPL2-201ENST00000260327 IGSF22Q8N9C0 903 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 STMN4Q9H169 189 aaPredicted RBP11□□□□□ -0.65
CTDSPL2-201ENST00000260327 DNMT1P26358 1616 aaKnown RBP11□□□□□ -0.65
CTDSPL2-201ENST00000260327 SETDB1Q15047 1291 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 GPIHBP1Q8IV16 184 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 LMNTD2Q8IXW0 634 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 IFNL2Q8IZJ0 200 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 KLHDC4Q8TBB5 520 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 MICAL1Q8TDZ2 1067 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 LEO1Q8WVC0 666 aaPredicted RBP11□□□□□ -0.65
CTDSPL2-201ENST00000260327 LRRC59Q96AG4 307 aaKnown RBP11□□□□□ -0.65
CTDSPL2-201ENST00000260327 SGSM2O43147 1006 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 SEPT6Q14141 434 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 TTC14Q96N46 770 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 SMC6Q96SB8 1091 aa11□□□□□ -0.65
CTDSPL2-201ENST00000260327 OTUD7BQ6GQQ9 843 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 STIM2Q9P246 746 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 LUC7L2Q9Y383 392 aaKnown RBP10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 E7EVH7 732 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 PPFIBP2Q8ND30 876 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 MIPOL1Q8TD10 442 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 CABS1Q96KC9 395 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 PSMB7Q99436 277 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 EYA1Q99502 592 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 WDR70Q9NW82 654 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 INTS8Q75QN2 995 aaKnown RBP10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 IQCGQ9H095 443 aaKnown RBP10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 NDUFB9Q9Y6M9 179 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 TRAPPC8Q9Y2L5 1435 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 ANKIB1Q9P2G1 1089 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 PALD1Q9ULE6 856 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 RIMS2Q9UQ26 1411 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 PSMA7O14818 248 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 SEC31AO94979 1220 aaKnown RBP10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 ARHGAP25P42331 645 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 CNGA4Q8IV77 575 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 LINS1Q8NG48 757 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 KAT14Q9H8E8 782 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 ZNF287Q9HBT7 754 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 SLC4A4Q9Y6R1 1079 aa10.99□□□□□ -0.65
CTDSPL2-201ENST00000260327 DESP17661 470 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 CHRNA2Q15822 529 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 VPS16Q9H269 839 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 FAM114A2Q9NRY5 505 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 ZFYP08048 801 aaPredicted RBP10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 GJC1P36383 396 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 C8orf74Q6P047 294 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 JAK2O60674 1132 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 ATP2B3Q16720 1220 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 IFIT1BQ5T764 474 aaKnown RBP10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 SND1Q7KZF4 910 aaKnown RBP eCLIP10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 ASIC1P78348 528 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 STMN2Q93045 179 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 PHF23Q9BUL5 403 aaPredicted RBP10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 WDR62O43379 1518 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 RNF113AO15541 343 aaKnown RBP10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 MTX1Q13505 466 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 PLIN2Q99541 437 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 PYM1Q9BRP8 204 aaKnown RBP10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 ANTXR1Q9H6X2 564 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 RRP15Q9Y3B9 282 aaKnown RBP10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 RAD50Q92878 1312 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 GNGT1P63211 74 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 E2F4Q16254 413 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 CCDC77Q9BR77 488 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 KRT23Q9C075 422 aa10.98□□□□□ -0.65
CTDSPL2-201ENST00000260327 NPC1L1Q9UHC9 1359 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 ABCC1P33527 1531 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 TNNC1P63316 161 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 TTC19Q6DKK2 380 aaPredicted RBP10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 IL13P35225 146 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 PPANQ9NQ55 473 aaKnown RBP10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 CTNND2Q9UQB3 1225 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 IL15P40933 162 aaPredicted RBP10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 ZKSCAN3Q9BRR0 538 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 STX8Q9UNK0 236 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 TRIM75PA6NK02 468 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 CEP85LQ5SZL2 805 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 FMNL3Q8IVF7 1028 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 MAP3K9P80192 1104 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 BRAPQ7Z569 592 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 CCDC50Q8IVM0 306 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 GOLGA5Q8TBA6 731 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 IFT74Q96LB3 600 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 STK38LQ9Y2H1 464 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 PLCH2O75038 1416 aa10.97□□□□□ -0.65
CTDSPL2-201ENST00000260327 AKAP4Q5JQC9 854 aa10.96□□□□□ -0.65
CTDSPL2-201ENST00000260327 TRIM68Q6AZZ1 485 aa10.96□□□□□ -0.65
CTDSPL2-201ENST00000260327 GPR161Q8N6U8 529 aaKnown RBP10.96□□□□□ -0.65
CTDSPL2-201ENST00000260327 NPATQ14207 1427 aa10.96□□□□□ -0.65
CTDSPL2-201ENST00000260327 CYP7A1P22680 504 aa10.96□□□□□ -0.65
CTDSPL2-201ENST00000260327 TIMM10P62072 90 aa10.96□□□□□ -0.65
CTDSPL2-201ENST00000260327 GSTA5Q7RTV2 222 aa10.96□□□□□ -0.65
CTDSPL2-201ENST00000260327 CCDC63Q8NA47 563 aa10.96□□□□□ -0.65
CTDSPL2-201ENST00000260327 TRIM7Q9C029 511 aa10.96□□□□□ -0.65
CTDSPL2-201ENST00000260327 ME3Q16798 604 aa10.96□□□□□ -0.65
CTDSPL2-201ENST00000260327 KRT28Q7Z3Y7 464 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms