RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 DMRTB1Q96MA1 342 aa9.13□□□□□ -0.95
TRA2B-201ENST00000259043 PIM2Q9P1W9 311 aa9.13□□□□□ -0.95
TRA2B-201ENST00000259043 DCTN4Q9UJW0 460 aa9.13□□□□□ -0.95
TRA2B-201ENST00000259043 METTL12A8MUP2 240 aa9.12□□□□□ -0.95
TRA2B-201ENST00000259043 KIAA0319Q5VV43 1072 aa9.12□□□□□ -0.95
TRA2B-201ENST00000259043 CCNJLQ8IV13 435 aa9.12□□□□□ -0.95
TRA2B-201ENST00000259043 RUSC1Q9BVN2 902 aa9.12□□□□□ -0.95
TRA2B-201ENST00000259043 DNAJC25Q9H1X3 360 aa9.12□□□□□ -0.95
TRA2B-201ENST00000259043 BIN2Q9UBW5 565 aaPredicted RBP9.12□□□□□ -0.95
TRA2B-201ENST00000259043 SOX1O00570 391 aaPredicted RBP9.11□□□□□ -0.95
TRA2B-201ENST00000259043 EIF1AYO14602 144 aaKnown RBP9.11□□□□□ -0.95
TRA2B-201ENST00000259043 GIMAP7Q8NHV1 300 aa9.11□□□□□ -0.95
TRA2B-201ENST00000259043 MFSD14AQ96MC6 490 aa9.11□□□□□ -0.95
TRA2B-201ENST00000259043 NPHS2Q9NP85 383 aa9.11□□□□□ -0.95
TRA2B-201ENST00000259043 HOXA10P31260 410 aaPredicted RBP9.1□□□□□ -0.95
TRA2B-201ENST00000259043 GRIA4P48058 902 aa9.1□□□□□ -0.95
TRA2B-201ENST00000259043 NLRP12P59046 1061 aa9.1□□□□□ -0.95
TRA2B-201ENST00000259043 DSC3Q14574 896 aa9.1□□□□□ -0.95
TRA2B-201ENST00000259043 TMC1Q8TDI8 760 aa9.1□□□□□ -0.95
TRA2B-201ENST00000259043 ASAP3Q8TDY4 903 aa9.1□□□□□ -0.95
TRA2B-201ENST00000259043 CSRNP1Q96S65 589 aa9.1□□□□□ -0.95
TRA2B-201ENST00000259043 ATG3Q9NT62 314 aa9.1□□□□□ -0.95
TRA2B-201ENST00000259043 ABCC9O60706 1549 aa9.1□□□□□ -0.95
TRA2B-201ENST00000259043 MEGF11A6BM72 1044 aa9.09□□□□□ -0.95
TRA2B-201ENST00000259043 GAS2O43903 313 aaKnown RBP9.09□□□□□ -0.95
TRA2B-201ENST00000259043 LCE1DQ5T752 114 aa9.09□□□□□ -0.95
TRA2B-201ENST00000259043 ABI1Q8IZP0 508 aa9.09□□□□□ -0.95
TRA2B-201ENST00000259043 CCDC74AQ96AQ1 378 aa9.09□□□□□ -0.95
TRA2B-201ENST00000259043 LIN7BQ9HAP6 207 aa9.09□□□□□ -0.95
TRA2B-201ENST00000259043 ANGEL1Q9UNK9 670 aaKnown RBP9.09□□□□□ -0.95
TRA2B-201ENST00000259043 LEMD3Q9Y2U8 911 aa9.09□□□□□ -0.95
TRA2B-201ENST00000259043 ESRRAP11474 423 aaPredicted RBP9.08□□□□□ -0.96
TRA2B-201ENST00000259043 MAP4P27816 1152 aaKnown RBP9.08□□□□□ -0.96
TRA2B-201ENST00000259043 ARL4DP49703 201 aa9.08□□□□□ -0.96
TRA2B-201ENST00000259043 SPRED3Q2MJR0 410 aa9.08□□□□□ -0.96
TRA2B-201ENST00000259043 SLC7A3Q8WY07 619 aa9.08□□□□□ -0.96
TRA2B-201ENST00000259043 SOX17Q9H6I2 414 aaPredicted RBP9.08□□□□□ -0.96
TRA2B-201ENST00000259043 A0A096LPE4 126 aa9.07□□□□□ -0.96
TRA2B-201ENST00000259043 A0A1W2PPZ6 126 aa9.07□□□□□ -0.96
TRA2B-201ENST00000259043 TREHO43280 583 aa9.07□□□□□ -0.96
TRA2B-201ENST00000259043 MAPK1P28482 360 aa9.07□□□□□ -0.96
TRA2B-201ENST00000259043 C19orf57Q0VDD7 668 aa9.07□□□□□ -0.96
TRA2B-201ENST00000259043 IKBKEQ14164 716 aa9.07□□□□□ -0.96
TRA2B-201ENST00000259043 CPSF6Q16630 551 aaKnown RBP eCLIP9.07□□□□□ -0.96
TRA2B-201ENST00000259043 FOSL1P15407 271 aa9.06□□□□□ -0.96
TRA2B-201ENST00000259043 MSMPQ1L6U9 139 aa9.06□□□□□ -0.96
TRA2B-201ENST00000259043 SGO2Q562F6 1265 aa9.06□□□□□ -0.96
TRA2B-201ENST00000259043 F13BP05160 661 aa9.05□□□□□ -0.96
TRA2B-201ENST00000259043 ITPKAP23677 461 aa9.05□□□□□ -0.96
TRA2B-201ENST00000259043 RXRBP28702 533 aa9.05□□□□□ -0.96
TRA2B-201ENST00000259043 ZNF423Q2M1K9 1284 aa9.05□□□□□ -0.96
TRA2B-201ENST00000259043 NUTM2GQ5VZR2 741 aa9.05□□□□□ -0.96
TRA2B-201ENST00000259043 GLIS3Q8NEA6 775 aa9.05□□□□□ -0.96
TRA2B-201ENST00000259043 EPS8L3Q8TE67 593 aaKnown RBP9.05□□□□□ -0.96
TRA2B-201ENST00000259043 OSBPL1AQ9BXW6 950 aa9.05□□□□□ -0.96
TRA2B-201ENST00000259043 KRTAP4-7Q9BYR0 210 aa9.05□□□□□ -0.96
TRA2B-201ENST00000259043 NRSN2Q9GZP1 204 aa9.05□□□□□ -0.96
TRA2B-201ENST00000259043 EHD4Q9H223 541 aa9.05□□□□□ -0.96
TRA2B-201ENST00000259043 ABCB6Q9NP58 842 aa9.05□□□□□ -0.96
TRA2B-201ENST00000259043 PRPF40BQ6NWY9 871 aaKnown RBP9.04□□□□□ -0.96
TRA2B-201ENST00000259043 FBXL6Q8N531 539 aa9.04□□□□□ -0.96
TRA2B-201ENST00000259043 CLEC4MQ9H2X3 399 aaPredicted RBP9.04□□□□□ -0.96
TRA2B-201ENST00000259043 CCDC39Q9UFE4 941 aa9.04□□□□□ -0.96
TRA2B-201ENST00000259043 PRNPP04156 253 aa9.03□□□□□ -0.96
TRA2B-201ENST00000259043 PCDH1Q08174 1060 aa9.03□□□□□ -0.96
TRA2B-201ENST00000259043 C12orf50Q8NA57 414 aaPredicted RBP9.03□□□□□ -0.96
TRA2B-201ENST00000259043 SMG8Q8ND04 991 aaKnown RBP9.03□□□□□ -0.96
TRA2B-201ENST00000259043 TMPRSS13Q9BYE2 586 aa9.03□□□□□ -0.96
TRA2B-201ENST00000259043 ZNF576Q9H609 170 aa9.03□□□□□ -0.96
TRA2B-201ENST00000259043 SUGCTQ9HAC7 445 aa9.03□□□□□ -0.96
TRA2B-201ENST00000259043 CYP4F12Q9HCS2 524 aa9.03□□□□□ -0.96
TRA2B-201ENST00000259043 PATL2C9JE40 543 aaKnown RBP9.02□□□□□ -0.97
TRA2B-201ENST00000259043 TIAF1O95411 115 aa9.02□□□□□ -0.97
TRA2B-201ENST00000259043 GRM2Q14416 872 aa9.02□□□□□ -0.97
TRA2B-201ENST00000259043 ENOX2Q16206 610 aaKnown RBP9.02□□□□□ -0.97
TRA2B-201ENST00000259043 PI16Q6UXB8 463 aa9.02□□□□□ -0.97
TRA2B-201ENST00000259043 CBLL1Q75N03 491 aa9.02□□□□□ -0.97
TRA2B-201ENST00000259043 FBXL18Q96ME1 805 aa9.02□□□□□ -0.97
TRA2B-201ENST00000259043 ASB16Q96NS5 453 aa9.02□□□□□ -0.97
TRA2B-201ENST00000259043 METTL22Q9BUU2 404 aaPredicted RBP9.02□□□□□ -0.97
TRA2B-201ENST00000259043 LOC100289279A0A1B0GTE1 492 aa9.01□□□□□ -0.97
TRA2B-201ENST00000259043 FAM95CA0A1B0GW59 222 aa9.01□□□□□ -0.97
TRA2B-201ENST00000259043 DLGAP3O95886 979 aa9.01□□□□□ -0.97
TRA2B-201ENST00000259043 PLCB3Q01970 1234 aa9.01□□□□□ -0.97
TRA2B-201ENST00000259043 PTPN12Q05209 780 aaKnown RBP9.01□□□□□ -0.97
TRA2B-201ENST00000259043 FMR1Q06787 632 aaKnown RBP eCLIP9.01□□□□□ -0.97
TRA2B-201ENST00000259043 OGFOD2Q6N063 350 aa9.01□□□□□ -0.97
TRA2B-201ENST00000259043 VSIG10LQ86VR7 867 aa9.01□□□□□ -0.97
TRA2B-201ENST00000259043 B3GALT4O96024 378 aa9□□□□□ -0.97
TRA2B-201ENST00000259043 PAOXQ6QHF9 649 aa9□□□□□ -0.97
TRA2B-201ENST00000259043 ASIC4Q96FT7 647 aa9□□□□□ -0.97
TRA2B-201ENST00000259043 PNMA6FA0A0J9YX94 578 aa8.99□□□□□ -0.97
TRA2B-201ENST00000259043 TMEM238LA0A1B0GVL6 79 aa8.99□□□□□ -0.97
TRA2B-201ENST00000259043 GADD45BO75293 160 aaPredicted RBP8.99□□□□□ -0.97
TRA2B-201ENST00000259043 JAG1P78504 1218 aa8.99□□□□□ -0.97
TRA2B-201ENST00000259043 GSTM4Q03013 218 aa8.99□□□□□ -0.97
TRA2B-201ENST00000259043 NFKBIBQ15653 356 aa8.99□□□□□ -0.97
TRA2B-201ENST00000259043 PDIA4P13667 645 aaKnown RBP8.98□□□□□ -0.97
TRA2B-201ENST00000259043 NFXL1Q6ZNB6 911 aa8.98□□□□□ -0.97
TRA2B-201ENST00000259043 ZSCAN29Q8IWY8 852 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms