RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CYP7A1P22680 504 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 PDIA3P30101 505 aaKnown RBP17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 PHKBQ93100 1093 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 SLC4A4Q9Y6R1 1079 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 FOXP2O15409 715 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 ZFYP08048 801 aaPredicted RBP17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 ATP2B1P20020 1258 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 ADD1P35611 737 aaKnown RBP17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 UBE2HP62256 183 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 CBX1P83916 185 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 TBC1D10CQ8IV04 446 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 NCOA7Q8NI08 942 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 RIC1Q4ADV7 1423 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 CYP2D7A0A087X1C5 515 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 MCM5P33992 734 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 GNL2Q13823 731 aaKnown RBP17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 VGLL2Q8N8G2 317 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 NUP133Q8WUM0 1156 aa17.16■□□□□ 0.34
TRAFD1-201ENST00000257604 UBE2Q2LH0YL09 131 aa17.15■□□□□ 0.34
TRAFD1-201ENST00000257604 RFC4P35249 363 aa17.15■□□□□ 0.34
TRAFD1-201ENST00000257604 DACT1Q9NYF0 836 aa17.15■□□□□ 0.34
TRAFD1-201ENST00000257604 LCORLQ8N3X6 602 aa17.15■□□□□ 0.34
TRAFD1-201ENST00000257604 CDC5LQ99459 802 aaKnown RBP17.15■□□□□ 0.34
TRAFD1-201ENST00000257604 RTCBQ9Y3I0 505 aaKnown RBP17.15■□□□□ 0.34
TRAFD1-201ENST00000257604 HMGB1P09429 215 aaKnown RBP17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 CSPP1Q1MSJ5 1256 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 PARP10Q53GL7 1025 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 ZSCAN25Q6NSZ9 544 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 NSUN7Q8NE18 718 aaKnown RBP17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 MROH5Q6ZUA9 1318 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 SRCAPQ6ZRS2 3230 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 ABCC6O95255 1503 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 SPDYE4A6NLX3 237 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 CTDNEP1O95476 244 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 TTF1Q15361 905 aaPredicted RBP17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 UQCRFS1P1P0C7P4 283 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 KIAA2012Q0VF49 1180 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 SASS6Q6UVJ0 657 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 FAM196AQ6ZSG2 479 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 ABCA3Q99758 1704 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 ANKIB1Q9P2G1 1089 aa17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 ORC3Q9UBD5 711 aaPredicted RBP17.14■□□□□ 0.33
TRAFD1-201ENST00000257604 ME1P48163 572 aa17.13■□□□□ 0.33
TRAFD1-201ENST00000257604 CYB5R4Q7L1T6 521 aa17.13■□□□□ 0.33
TRAFD1-201ENST00000257604 NLRP3Q96P20 1036 aa17.13■□□□□ 0.33
TRAFD1-201ENST00000257604 ITGB4P16144 1822 aa17.13■□□□□ 0.33
TRAFD1-201ENST00000257604 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
TRAFD1-201ENST00000257604 SF3A1Q15459 793 aaKnown RBP17.13■□□□□ 0.33
TRAFD1-201ENST00000257604 CCDC183Q5T5S1 534 aa17.13■□□□□ 0.33
TRAFD1-201ENST00000257604 IL17RAQ96F46 866 aa17.13■□□□□ 0.33
TRAFD1-201ENST00000257604 hCG_1642624A0A1W2PR95 340 aa17.12■□□□□ 0.33
TRAFD1-201ENST00000257604 IFIT3O14879 490 aaKnown RBP17.12■□□□□ 0.33
TRAFD1-201ENST00000257604 TERF1P54274 439 aa17.12■□□□□ 0.33
TRAFD1-201ENST00000257604 NHSL1Q5SYE7 1610 aa17.12■□□□□ 0.33
TRAFD1-201ENST00000257604 TSGA10IPQ3SY00 556 aa17.12■□□□□ 0.33
TRAFD1-201ENST00000257604 TMEM67Q5HYA8 995 aa17.12■□□□□ 0.33
TRAFD1-201ENST00000257604 ARHGEF1Q92888 912 aaKnown RBP17.12■□□□□ 0.33
TRAFD1-201ENST00000257604 EXOSC10Q01780 885 aaKnown RBP17.12■□□□□ 0.33
TRAFD1-201ENST00000257604 AK7Q96M32 723 aa17.12■□□□□ 0.33
TRAFD1-201ENST00000257604 SHANK3Q9BYB0 1731 aa17.11■□□□□ 0.33
TRAFD1-201ENST00000257604 PFKFB2O60825 505 aa17.11■□□□□ 0.33
TRAFD1-201ENST00000257604 ANTXR2P58335 489 aa17.11■□□□□ 0.33
TRAFD1-201ENST00000257604 CAVIN4Q5BKX8 364 aa17.11■□□□□ 0.33
TRAFD1-201ENST00000257604 FBXO3Q9UK99 471 aa17.11■□□□□ 0.33
TRAFD1-201ENST00000257604 ADCY5O95622 1261 aa17.11■□□□□ 0.33
TRAFD1-201ENST00000257604 HSPA1LP34931 641 aa17.11■□□□□ 0.33
TRAFD1-201ENST00000257604 IFNL3Q8IZI9 196 aa17.11■□□□□ 0.33
TRAFD1-201ENST00000257604 LEO1Q8WVC0 666 aaPredicted RBP17.11■□□□□ 0.33
TRAFD1-201ENST00000257604 C8orf76Q96K31 380 aa17.11■□□□□ 0.33
TRAFD1-201ENST00000257604 DYNC1I1O14576 645 aa17.1■□□□□ 0.33
TRAFD1-201ENST00000257604 ADGRA1Q86SQ6 560 aa17.1■□□□□ 0.33
TRAFD1-201ENST00000257604 STRBPQ96SI9 672 aaKnown RBP17.1■□□□□ 0.33
TRAFD1-201ENST00000257604 NEDD4P46934 1319 aa17.1■□□□□ 0.33
TRAFD1-201ENST00000257604 LAMB4A4D0S4 1761 aa17.1■□□□□ 0.33
TRAFD1-201ENST00000257604 BARGINQ6ZT62 677 aa17.1■□□□□ 0.33
TRAFD1-201ENST00000257604 TNMDQ9H2S6 317 aa17.1■□□□□ 0.33
TRAFD1-201ENST00000257604 RANBP6O60518 1105 aaKnown RBP17.1■□□□□ 0.33
TRAFD1-201ENST00000257604 NR1I2O75469 434 aa17.1■□□□□ 0.33
TRAFD1-201ENST00000257604 EVX2Q03828 476 aa17.1■□□□□ 0.33
TRAFD1-201ENST00000257604 MINPP1Q9UNW1 487 aa17.1■□□□□ 0.33
TRAFD1-201ENST00000257604 TRIM37O94972 964 aa17.09■□□□□ 0.33
TRAFD1-201ENST00000257604 METAP2P50579 478 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRAFD1-201ENST00000257604 USP28Q96RU2 1077 aa17.09■□□□□ 0.33
TRAFD1-201ENST00000257604 RPS8P62241 208 aaKnown RBP17.09■□□□□ 0.33
TRAFD1-201ENST00000257604 TXNRD3Q86VQ6 643 aa17.09■□□□□ 0.33
TRAFD1-201ENST00000257604 SEPT12Q8IYM1 358 aa17.09■□□□□ 0.33
TRAFD1-201ENST00000257604 NUP62CLQ9H1M0 184 aa17.09■□□□□ 0.33
TRAFD1-201ENST00000257604 EPB41L4AQ9HCS5 686 aaPredicted RBP17.09■□□□□ 0.33
TRAFD1-201ENST00000257604 AATFQ9NY61 560 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRAFD1-201ENST00000257604 FGFR2P21802 821 aa17.08■□□□□ 0.33
TRAFD1-201ENST00000257604 VPS72Q15906 364 aa17.08■□□□□ 0.33
TRAFD1-201ENST00000257604 TPTE2Q6XPS3 522 aa17.08■□□□□ 0.33
TRAFD1-201ENST00000257604 MFSD6Q6ZSS7 791 aa17.08■□□□□ 0.33
TRAFD1-201ENST00000257604 NBPF3Q9H094 633 aa17.08■□□□□ 0.33
TRAFD1-201ENST00000257604 BCL2L12Q9HB09 334 aa17.08■□□□□ 0.33
TRAFD1-201ENST00000257604 COL14A1Q05707 1796 aaKnown RBP17.08■□□□□ 0.33
TRAFD1-201ENST00000257604 AFF2P51816 1311 aa17.08■□□□□ 0.32
TRAFD1-201ENST00000257604 ISM2Q6H9L7 571 aa17.08■□□□□ 0.32
TRAFD1-201ENST00000257604 ZSWIM5Q9P217 1185 aa17.08■□□□□ 0.32
TRAFD1-201ENST00000257604 PHLPP1O60346 1717 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms