RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 NBPF15Q8N660 670 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
MSI1-201ENST00000257552 IL2RBP14784 551 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 NCAPHQ15003 741 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 ADALQ6DHV7 355 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 CCDC191Q8NCU4 936 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 LCMT1Q9UIC8 334 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 OVOS2A0A0G2JMS6 1433 aa17.06■□□□□ 0.32
MSI1-201ENST00000257552 ZSCAN26Q16670 478 aa17.05■□□□□ 0.32
MSI1-201ENST00000257552 LRP10Q7Z4F1 713 aa17.05■□□□□ 0.32
MSI1-201ENST00000257552 LLPHQ9BRT6 129 aaKnown RBP17.05■□□□□ 0.32
MSI1-201ENST00000257552 ZSWIM4Q9H7M6 989 aa17.05■□□□□ 0.32
MSI1-201ENST00000257552 GJB4Q9NTQ9 266 aa17.05■□□□□ 0.32
MSI1-201ENST00000257552 PARP3Q9Y6F1 533 aa17.05■□□□□ 0.32
MSI1-201ENST00000257552 SOS2Q07890 1332 aaPredicted RBP17.05■□□□□ 0.32
MSI1-201ENST00000257552 UBASH3AP57075 661 aa17.05■□□□□ 0.32
MSI1-201ENST00000257552 LRRFIP1Q32MZ4 808 aaKnown RBP17.05■□□□□ 0.32
MSI1-201ENST00000257552 CC2D1AQ6P1N0 951 aaPredicted RBP17.05■□□□□ 0.32
MSI1-201ENST00000257552 PHLPP2Q6ZVD8 1323 aa17.05■□□□□ 0.32
MSI1-201ENST00000257552 DHX32Q7L7V1 743 aaKnown RBP17.05■□□□□ 0.32
MSI1-201ENST00000257552 RAB11FIP4Q86YS3 637 aa17.05■□□□□ 0.32
MSI1-201ENST00000257552 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
MSI1-201ENST00000257552 EFCAB8A8MWE9 144 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 LMAN1P49257 510 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 GPS2Q13227 327 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 BTG4Q9NY30 223 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 LMTK3Q96Q04 1460 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 CPDO75976 1380 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 ZNF202O95125 648 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 GNG11P61952 73 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 REXO1L1PQ8IX06 675 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 RSPH14Q9UHP6 348 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 PCDH11XQ9BZA7 1347 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 PCDH11YQ9BZA8 1340 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 MCMDC2Q4G0Z9 681 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 LINC00301Q8NCQ3 95 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
MSI1-201ENST00000257552 WDR24Q96S15 920 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 TSPYL1Q9H0U9 437 aa17.04■□□□□ 0.32
MSI1-201ENST00000257552 GPHNQ9NQX3 736 aaPredicted RBP17.04■□□□□ 0.32
MSI1-201ENST00000257552 CRYBG1Q9Y4K1 1723 aa17.03■□□□□ 0.32
MSI1-201ENST00000257552 TMEM232C9JQI7 657 aa17.03■□□□□ 0.32
MSI1-201ENST00000257552 NLRP12P59046 1061 aa17.03■□□□□ 0.32
MSI1-201ENST00000257552 HDAC5Q9UQL6 1122 aa17.03■□□□□ 0.32
MSI1-201ENST00000257552 MARCKSP29966 332 aaPredicted RBP17.03■□□□□ 0.32
MSI1-201ENST00000257552 CCDC158Q5M9N0 1113 aa17.03■□□□□ 0.32
MSI1-201ENST00000257552 PDILTQ8N807 584 aa17.03■□□□□ 0.32
MSI1-201ENST00000257552 COL18A1P39060 1754 aa17.03■□□□□ 0.32
MSI1-201ENST00000257552 TFCP2Q12800 502 aa17.02■□□□□ 0.32
MSI1-201ENST00000257552 RTEL1Q9NZ71 1219 aa17.02■□□□□ 0.32
MSI1-201ENST00000257552 SPTLC2O15270 562 aa17.02■□□□□ 0.31
MSI1-201ENST00000257552 CCP110O43303 1012 aa17.02■□□□□ 0.31
MSI1-201ENST00000257552 SRRTQ9BXP5 876 aaKnown RBP17.02■□□□□ 0.31
MSI1-201ENST00000257552 PARD6BQ9BYG5 372 aa17.02■□□□□ 0.31
MSI1-201ENST00000257552 ARFGAP3Q9NP61 516 aa17.02■□□□□ 0.31
MSI1-201ENST00000257552 ZNF609O15014 1411 aa17.02■□□□□ 0.31
MSI1-201ENST00000257552 TUBB4AP04350 444 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 PDIA3P30101 505 aaKnown RBP17.01■□□□□ 0.31
MSI1-201ENST00000257552 CASQ1P31415 396 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 KCNJ6P48051 423 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 DBNDD2Q9BQY9 259 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 VWA3AA6NCI4 1184 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 TOP1P11387 765 aaKnown RBP17.01■□□□□ 0.31
MSI1-201ENST00000257552 FDPSP14324 419 aaKnown RBP17.01■□□□□ 0.31
MSI1-201ENST00000257552 PPP2R3AQ06190 1150 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 ATL3Q6DD88 541 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 RASSF4Q9H2L5 321 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 ASAP1Q9ULH1 1129 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 C5P01031 1676 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 NEDD4P46934 1319 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 MYO1CO00159 1063 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 LMBR1LQ6UX01 489 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 BPIFA3Q9BQP9 254 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 PPP2R2CQ9Y2T4 447 aa17.01■□□□□ 0.31
MSI1-201ENST00000257552 A0A1W2PQ27 194 aa17■□□□□ 0.31
MSI1-201ENST00000257552 A0A1W2PQ64 194 aa17■□□□□ 0.31
MSI1-201ENST00000257552 A0A1W2PQD8 194 aa17■□□□□ 0.31
MSI1-201ENST00000257552 TPM1P09493 284 aa17■□□□□ 0.31
MSI1-201ENST00000257552 HSD3B7Q9H2F3 369 aa17■□□□□ 0.31
MSI1-201ENST00000257552 COL5A2P05997 1499 aaPredicted RBP17■□□□□ 0.31
MSI1-201ENST00000257552 PFKFB1P16118 471 aa17■□□□□ 0.31
MSI1-201ENST00000257552 ATP5JP18859 108 aa17■□□□□ 0.31
MSI1-201ENST00000257552 UBXN6Q9BZV1 441 aa17■□□□□ 0.31
MSI1-201ENST00000257552 ADAM21Q9UKJ8 722 aa17■□□□□ 0.31
MSI1-201ENST00000257552 CARMIL3Q8ND23 1372 aa17■□□□□ 0.31
MSI1-201ENST00000257552 JCADQ9P266 1359 aa17■□□□□ 0.31
MSI1-201ENST00000257552 MUM1L1Q5H9M0 696 aa16.99■□□□□ 0.31
MSI1-201ENST00000257552 C8orf76Q96K31 380 aa16.99■□□□□ 0.31
MSI1-201ENST00000257552 H3BQF6 201 aa16.99■□□□□ 0.31
MSI1-201ENST00000257552 ZSCAN12O43309 604 aa16.99■□□□□ 0.31
MSI1-201ENST00000257552 KARSQ15046 597 aaKnown RBP16.99■□□□□ 0.31
MSI1-201ENST00000257552 TNNI3KQ59H18 835 aa16.99■□□□□ 0.31
MSI1-201ENST00000257552 SYNE3Q6ZMZ3 975 aa16.99■□□□□ 0.31
MSI1-201ENST00000257552 KCNG4Q8TDN1 519 aa16.99■□□□□ 0.31
MSI1-201ENST00000257552 CARD10Q9BWT7 1032 aa16.99■□□□□ 0.31
MSI1-201ENST00000257552 FPGT-TNNI3KV9GXZ4 949 aa16.99■□□□□ 0.31
MSI1-201ENST00000257552 UTYO14607 1347 aa16.99■□□□□ 0.31
MSI1-201ENST00000257552 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
MSI1-201ENST00000257552 MCM6Q14566 821 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms