RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 POLR2AP24928 1970 aaKnown RBP10.54□□□□□ -0.72
TMEM258-201ENST00000257262 A0A1B0GUL7 405 aa10.54□□□□□ -0.72
TMEM258-201ENST00000257262 F8W031 263 aaPredicted RBP10.54□□□□□ -0.72
TMEM258-201ENST00000257262 RRP1P56182 461 aaKnown RBP10.54□□□□□ -0.72
TMEM258-201ENST00000257262 SCARF1Q14162 830 aa10.54□□□□□ -0.72
TMEM258-201ENST00000257262 RPAP2Q8IXW5 612 aaPredicted RBP10.54□□□□□ -0.72
TMEM258-201ENST00000257262 NEUROD6Q96NK8 337 aa10.54□□□□□ -0.72
TMEM258-201ENST00000257262 HDAC9Q9UKV0 1011 aa10.54□□□□□ -0.72
TMEM258-201ENST00000257262 NOP58Q9Y2X3 529 aaKnown RBP10.54□□□□□ -0.72
TMEM258-201ENST00000257262 ASTN2O75129 1339 aaPredicted RBP10.54□□□□□ -0.72
TMEM258-201ENST00000257262 TRAF5O00463 557 aa10.53□□□□□ -0.72
TMEM258-201ENST00000257262 ADORA1P30542 326 aa10.53□□□□□ -0.72
TMEM258-201ENST00000257262 MMP14P50281 582 aa10.53□□□□□ -0.72
TMEM258-201ENST00000257262 CHAF1AQ13111 956 aaPredicted RBP10.53□□□□□ -0.72
TMEM258-201ENST00000257262 OS9Q13438 667 aaPredicted RBP10.53□□□□□ -0.72
TMEM258-201ENST00000257262 NBPF9Q3BBW0 867 aa10.53□□□□□ -0.72
TMEM258-201ENST00000257262 MFSD14BQ5SR56 506 aa10.53□□□□□ -0.72
TMEM258-201ENST00000257262 DLK2Q6UY11 383 aa10.53□□□□□ -0.72
TMEM258-201ENST00000257262 CDC37L1Q7L3B6 337 aa10.53□□□□□ -0.72
TMEM258-201ENST00000257262 USP48Q86UV5 1035 aa10.53□□□□□ -0.72
TMEM258-201ENST00000257262 SIRT2Q8IXJ6 389 aa10.53□□□□□ -0.72
TMEM258-201ENST00000257262 DCPSQ96C86 337 aaKnown RBP10.53□□□□□ -0.72
TMEM258-201ENST00000257262 XAGE2Q96GT9 111 aa10.53□□□□□ -0.72
TMEM258-201ENST00000257262 TMEM106CQ9BVX2 250 aa10.53□□□□□ -0.72
TMEM258-201ENST00000257262 GLIS2Q9BZE0 524 aaPredicted RBP10.53□□□□□ -0.72
TMEM258-201ENST00000257262 WNT10BO00744 389 aa10.52□□□□□ -0.73
TMEM258-201ENST00000257262 PHKA1P46020 1223 aa10.52□□□□□ -0.73
TMEM258-201ENST00000257262 GRIK5Q16478 980 aa10.52□□□□□ -0.73
TMEM258-201ENST00000257262 ANGEL2Q5VTE6 544 aaKnown RBP10.52□□□□□ -0.73
TMEM258-201ENST00000257262 CCDC102BQ68D86 513 aa10.52□□□□□ -0.73
TMEM258-201ENST00000257262 EXOC6BQ9Y2D4 811 aa10.52□□□□□ -0.73
TMEM258-201ENST00000257262 PCDHAC2Q9Y5I4 1007 aa10.52□□□□□ -0.73
TMEM258-201ENST00000257262 TRPM7Q96QT4 1865 aa10.52□□□□□ -0.73
TMEM258-201ENST00000257262 ECM29Q5VYK3 1845 aa10.51□□□□□ -0.73
TMEM258-201ENST00000257262 TMEM88BA6NKF7 163 aa10.51□□□□□ -0.73
TMEM258-201ENST00000257262 DLGAP5Q15398 846 aa10.51□□□□□ -0.73
TMEM258-201ENST00000257262 CFAP100Q494V2 611 aa10.51□□□□□ -0.73
TMEM258-201ENST00000257262 IER5LQ5T953 404 aa10.51□□□□□ -0.73
TMEM258-201ENST00000257262 CST9Q5W186 159 aa10.51□□□□□ -0.73
TMEM258-201ENST00000257262 DNAJC5GQ8N7S2 189 aa10.51□□□□□ -0.73
TMEM258-201ENST00000257262 TBC1D22AQ8WUA7 517 aa10.51□□□□□ -0.73
TMEM258-201ENST00000257262 GPR108Q9NPR9 543 aa10.51□□□□□ -0.73
TMEM258-201ENST00000257262 GNL3LQ9NVN8 582 aaKnown RBP10.51□□□□□ -0.73
TMEM258-201ENST00000257262 GGA3Q9NZ52 723 aa10.51□□□□□ -0.73
TMEM258-201ENST00000257262 PCDHB8Q9UN66 801 aa10.51□□□□□ -0.73
TMEM258-201ENST00000257262 TTF2Q9UNY4 1162 aaKnown RBP10.51□□□□□ -0.73
TMEM258-201ENST00000257262 SCAF8Q9UPN6 1271 aaKnown RBP10.51□□□□□ -0.73
TMEM258-201ENST00000257262 COL1A1P02452 1464 aaPredicted RBP10.5□□□□□ -0.73
TMEM258-201ENST00000257262 ADM5C9JUS6 153 aa10.5□□□□□ -0.73
TMEM258-201ENST00000257262 SEMA3EO15041 775 aa10.5□□□□□ -0.73
TMEM258-201ENST00000257262 RBM5P52756 815 aaKnown RBP eCLIP10.5□□□□□ -0.73
TMEM258-201ENST00000257262 TNNI3KQ59H18 835 aa10.5□□□□□ -0.73
TMEM258-201ENST00000257262 GORABQ5T7V8 394 aa10.5□□□□□ -0.73
TMEM258-201ENST00000257262 COL13A1Q5TAT6 717 aaPredicted RBP10.5□□□□□ -0.73
TMEM258-201ENST00000257262 KRT26Q7Z3Y9 468 aa10.5□□□□□ -0.73
TMEM258-201ENST00000257262 MTMR14Q8NCE2 650 aa10.5□□□□□ -0.73
TMEM258-201ENST00000257262 WDR66Q8TBY9 1149 aa10.5□□□□□ -0.73
TMEM258-201ENST00000257262 ZBED3Q96IU2 234 aaPredicted RBP10.5□□□□□ -0.73
TMEM258-201ENST00000257262 PRMT6Q96LA8 375 aaPredicted RBP10.5□□□□□ -0.73
TMEM258-201ENST00000257262 DENND2AQ9ULE3 1009 aa10.5□□□□□ -0.73
TMEM258-201ENST00000257262 FPGT-TNNI3KV9GXZ4 949 aa10.5□□□□□ -0.73
TMEM258-201ENST00000257262 APBB1O00213 710 aa10.49□□□□□ -0.73
TMEM258-201ENST00000257262 HMMRO75330 724 aa10.49□□□□□ -0.73
TMEM258-201ENST00000257262 SULF1Q8IWU6 871 aa10.49□□□□□ -0.73
TMEM258-201ENST00000257262 EAF2Q96CJ1 260 aaPredicted RBP10.49□□□□□ -0.73
TMEM258-201ENST00000257262 CRBNQ96SW2 442 aa10.49□□□□□ -0.73
TMEM258-201ENST00000257262 DBNDD2Q9BQY9 259 aa10.49□□□□□ -0.73
TMEM258-201ENST00000257262 CCDC8Q9H0W5 538 aaPredicted RBP10.49□□□□□ -0.73
TMEM258-201ENST00000257262 ZNF408Q9H9D4 720 aa10.49□□□□□ -0.73
TMEM258-201ENST00000257262 SERPINA10Q9UK55 444 aa10.49□□□□□ -0.73
TMEM258-201ENST00000257262 PITPNM2Q9BZ72 1349 aa10.49□□□□□ -0.73
TMEM258-201ENST00000257262 CELF2O95319 508 aaKnown RBP10.48□□□□□ -0.73
TMEM258-201ENST00000257262 CRKP46108 304 aa10.48□□□□□ -0.73
TMEM258-201ENST00000257262 RASGRF1Q13972 1273 aa10.48□□□□□ -0.73
TMEM258-201ENST00000257262 HSP90AB4PQ58FF6 505 aa10.48□□□□□ -0.73
TMEM258-201ENST00000257262 ERC1Q8IUD2 1116 aa10.48□□□□□ -0.73
TMEM258-201ENST00000257262 TNS4Q8IZW8 715 aa10.48□□□□□ -0.73
TMEM258-201ENST00000257262 RHPN1Q8TCX5 695 aa10.48□□□□□ -0.73
TMEM258-201ENST00000257262 IL1RAPL2Q9NP60 686 aa10.48□□□□□ -0.73
TMEM258-201ENST00000257262 HMG20BQ9P0W2 317 aa10.48□□□□□ -0.73
TMEM258-201ENST00000257262 SUPT16HQ9Y5B9 1047 aaKnown RBP10.48□□□□□ -0.73
TMEM258-201ENST00000257262 AOX1Q06278 1338 aa10.48□□□□□ -0.73
TMEM258-201ENST00000257262 SALL1Q9NSC2 1324 aa10.48□□□□□ -0.73
TMEM258-201ENST00000257262 CLRN2A0PK11 232 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 MYO1BO43795 1136 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 UQCRFS1P1P0C7P4 283 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 ARID4AP29374 1257 aaPredicted RBP10.47□□□□□ -0.73
TMEM258-201ENST00000257262 PRDX5P30044 214 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 HDLBPQ00341 1268 aaKnown RBP10.47□□□□□ -0.73
TMEM258-201ENST00000257262 DEFB115Q30KQ5 88 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 CCDC158Q5M9N0 1113 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 PRAMEF18Q5VWM3 479 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 PI16Q6UXB8 463 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 SPATA5Q8NB90 893 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 KLRG1Q96E93 195 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 CDCA5Q96FF9 252 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 MRIQ9BWK5 157 aa10.47□□□□□ -0.73
TMEM258-201ENST00000257262 TDRD3Q9H7E2 651 aaKnown RBP10.47□□□□□ -0.73
TMEM258-201ENST00000257262 TLR7Q9NYK1 1049 aaKnown RBP10.47□□□□□ -0.73
TMEM258-201ENST00000257262 ABCF2Q9UG63 623 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms