RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 ERC1Q8IUD2 1116 aa17.53■□□□□ 0.4
CNN1-201ENST00000252456 RHPN1Q8TCX5 695 aa17.52■□□□□ 0.4
CNN1-201ENST00000252456 KLRG1Q96E93 195 aa17.52■□□□□ 0.4
CNN1-201ENST00000252456 HMG20BQ9P0W2 317 aa17.52■□□□□ 0.4
CNN1-201ENST00000252456 PCDHB15Q9Y5E8 787 aa17.52■□□□□ 0.4
CNN1-201ENST00000252456 MYO5AQ9Y4I1 1855 aaKnown RBP17.52■□□□□ 0.39
CNN1-201ENST00000252456 MYH2Q9UKX2 1941 aa17.51■□□□□ 0.39
CNN1-201ENST00000252456 MCAMP43121 646 aa17.51■□□□□ 0.39
CNN1-201ENST00000252456 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
CNN1-201ENST00000252456 CDCA5Q96FF9 252 aa17.51■□□□□ 0.39
CNN1-201ENST00000252456 CCDC8Q9H0W5 538 aaPredicted RBP17.51■□□□□ 0.39
CNN1-201ENST00000252456 CNTNAP1P78357 1384 aa17.51■□□□□ 0.39
CNN1-201ENST00000252456 CLRN2A0PK11 232 aa17.5■□□□□ 0.39
CNN1-201ENST00000252456 RASSF10A6NK89 507 aa17.5■□□□□ 0.39
CNN1-201ENST00000252456 RBM5P52756 815 aaKnown RBP eCLIP17.5■□□□□ 0.39
CNN1-201ENST00000252456 GORABQ5T7V8 394 aa17.5■□□□□ 0.39
CNN1-201ENST00000252456 MRIQ9BWK5 157 aa17.5■□□□□ 0.39
CNN1-201ENST00000252456 ZNF408Q9H9D4 720 aa17.5■□□□□ 0.39
CNN1-201ENST00000252456 IL1RAPL2Q9NP60 686 aa17.5■□□□□ 0.39
CNN1-201ENST00000252456 SPDYE2Q495Y8 402 aa17.5■□□□□ 0.39
CNN1-201ENST00000252456 APOBEC3FQ8IUX4 373 aaKnown RBP17.5■□□□□ 0.39
CNN1-201ENST00000252456 SPATA5Q8NB90 893 aa17.5■□□□□ 0.39
CNN1-201ENST00000252456 TEKT1Q969V4 418 aa17.5■□□□□ 0.39
CNN1-201ENST00000252456 KIF1BPQ96EK5 621 aa17.5■□□□□ 0.39
CNN1-201ENST00000252456 ZDHHC15Q96MV8 337 aa17.5■□□□□ 0.39
CNN1-201ENST00000252456 TLL2Q9Y6L7 1015 aa17.5■□□□□ 0.39
CNN1-201ENST00000252456 MAST3O60307 1309 aa17.49■□□□□ 0.39
CNN1-201ENST00000252456 APBB1O00213 710 aa17.49■□□□□ 0.39
CNN1-201ENST00000252456 DIXDC1Q155Q3 683 aa17.49■□□□□ 0.39
CNN1-201ENST00000252456 PRAMEF18Q5VWM3 479 aa17.49■□□□□ 0.39
CNN1-201ENST00000252456 APOBEC3HQ6NTF7 200 aaKnown RBP17.49■□□□□ 0.39
CNN1-201ENST00000252456 HHIPL2Q6UWX4 724 aa17.49■□□□□ 0.39
CNN1-201ENST00000252456 SAPCD2Q86UD0 394 aa17.49■□□□□ 0.39
CNN1-201ENST00000252456 ZNF512BQ96KM6 892 aaPredicted RBP17.49■□□□□ 0.39
CNN1-201ENST00000252456 TDRD3Q9H7E2 651 aaKnown RBP17.49■□□□□ 0.39
CNN1-201ENST00000252456 MKRN1Q9UHC7 482 aaKnown RBP17.49■□□□□ 0.39
CNN1-201ENST00000252456 MAST2Q6P0Q8 1798 aa17.48■□□□□ 0.39
CNN1-201ENST00000252456 PAPPA2Q9BXP8 1791 aa17.48■□□□□ 0.39
CNN1-201ENST00000252456 RAB11FIP3O75154 756 aa17.48■□□□□ 0.39
CNN1-201ENST00000252456 LDHBP07195 334 aaKnown RBP17.48■□□□□ 0.39
CNN1-201ENST00000252456 UQCRFS1P1P0C7P4 283 aa17.48■□□□□ 0.39
CNN1-201ENST00000252456 AACSQ86V21 672 aa17.48■□□□□ 0.39
CNN1-201ENST00000252456 ZNF384Q8TF68 577 aa17.48■□□□□ 0.39
CNN1-201ENST00000252456 ZNF70Q9UC06 446 aaPredicted RBP17.48■□□□□ 0.39
CNN1-201ENST00000252456 SSC5DA1L4H1 1573 aa17.48■□□□□ 0.39
CNN1-201ENST00000252456 THSD7BQ9C0I4 1608 aa17.48■□□□□ 0.39
CNN1-201ENST00000252456 MYO1BO43795 1136 aa17.47■□□□□ 0.39
CNN1-201ENST00000252456 CCDC158Q5M9N0 1113 aa17.47■□□□□ 0.39
CNN1-201ENST00000252456 TTC39AQ5SRH9 613 aa17.47■□□□□ 0.39
CNN1-201ENST00000252456 ZGPATQ8N5A5 531 aaKnown RBP17.47■□□□□ 0.39
CNN1-201ENST00000252456 ABT1Q9ULW3 272 aaKnown RBP17.47■□□□□ 0.39
CNN1-201ENST00000252456 DAGLAQ9Y4D2 1042 aa17.47■□□□□ 0.39
CNN1-201ENST00000252456 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
CNN1-201ENST00000252456 DOCK2Q92608 1830 aa17.47■□□□□ 0.39
CNN1-201ENST00000252456 TBC1D9Q6ZT07 1266 aa17.47■□□□□ 0.39
CNN1-201ENST00000252456 JMYQ8N9B5 988 aa17.47■□□□□ 0.39
CNN1-201ENST00000252456 DEFB129Q9H1M3 183 aa17.47■□□□□ 0.39
CNN1-201ENST00000252456 DCTPP1Q9H773 170 aa17.47■□□□□ 0.39
CNN1-201ENST00000252456 VEZTQ9HBM0 779 aa17.47■□□□□ 0.39
CNN1-201ENST00000252456 GBA2Q9HCG7 927 aaPredicted RBP17.47■□□□□ 0.39
CNN1-201ENST00000252456 ABCF2Q9UG63 623 aa17.47■□□□□ 0.39
CNN1-201ENST00000252456 SNRKQ9NRH2 765 aa17.46■□□□□ 0.39
CNN1-201ENST00000252456 GAKO14976 1311 aa17.46■□□□□ 0.38
CNN1-201ENST00000252456 VEGFBP49765 207 aa17.45■□□□□ 0.38
CNN1-201ENST00000252456 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
CNN1-201ENST00000252456 CLASRPQ8N2M8 674 aaKnown RBP17.45■□□□□ 0.38
CNN1-201ENST00000252456 CYP2E1P05181 493 aaPredicted RBP17.44■□□□□ 0.38
CNN1-201ENST00000252456 CACNB3P54284 484 aa17.44■□□□□ 0.38
CNN1-201ENST00000252456 MECOMQ03112 1051 aa17.44■□□□□ 0.38
CNN1-201ENST00000252456 ZAP70P43403 619 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 RASA3Q14644 834 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 SPTY2D1Q68D10 685 aaPredicted RBP17.43■□□□□ 0.38
CNN1-201ENST00000252456 CDAN1Q8IWY9 1227 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 HHIPL1Q96JK4 782 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 LRRCC1Q9C099 1032 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 PPP2R3BQ9Y5P8 575 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 SMARCA5O60264 1052 aaPredicted RBP17.43■□□□□ 0.38
CNN1-201ENST00000252456 HUNKP57058 714 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 MOB2Q70IA6 237 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 ERICH6Q7L0X2 663 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 DZIP1Q86YF9 867 aaKnown RBP17.43■□□□□ 0.38
CNN1-201ENST00000252456 C2orf69Q8N8R5 385 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 EXOC6Q8TAG9 804 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 NSUN4Q96CB9 384 aaKnown RBP17.43■□□□□ 0.38
CNN1-201ENST00000252456 FAM163AQ96GL9 167 aaPredicted RBP17.43■□□□□ 0.38
CNN1-201ENST00000252456 TEPSINQ96N21 525 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 NDUFB9Q9Y6M9 179 aa17.43■□□□□ 0.38
CNN1-201ENST00000252456 TCP10L2B9ZVM9 353 aa17.42■□□□□ 0.38
CNN1-201ENST00000252456 CYP4F22Q6NT55 531 aa17.42■□□□□ 0.38
CNN1-201ENST00000252456 CDC42EP5Q6NZY7 148 aa17.42■□□□□ 0.38
CNN1-201ENST00000252456 PIH1D3Q9NQM4 214 aaKnown RBP17.42■□□□□ 0.38
CNN1-201ENST00000252456 RFX7Q2KHR2 1363 aa17.42■□□□□ 0.38
CNN1-201ENST00000252456 OTOFQ9HC10 1997 aa17.41■□□□□ 0.38
CNN1-201ENST00000252456 FKBP1BP68106 108 aa17.41■□□□□ 0.38
CNN1-201ENST00000252456 TNFAIP1Q13829 316 aa17.41■□□□□ 0.38
CNN1-201ENST00000252456 NBPF12Q5TAG4 269 aaPredicted RBP17.41■□□□□ 0.38
CNN1-201ENST00000252456 FKBP1CQ5VVH2 108 aa17.41■□□□□ 0.38
CNN1-201ENST00000252456 CAPNS2Q96L46 248 aa17.41■□□□□ 0.38
CNN1-201ENST00000252456 TMEM39BQ9GZU3 492 aa17.41■□□□□ 0.38
CNN1-201ENST00000252456 FZD1Q9UP38 647 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms