RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 STAT6P42226 847 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ARHGAP29Q52LW3 1261 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 USP48Q86UV5 1035 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 BICD1Q96G01 975 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 EXOC1Q9NV70 894 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 RMND1Q9NWS8 449 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 RIMBP3CA6NJZ7 1639 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 RIMBP3BA6NNM3 1639 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 RIMBP3Q9UFD9 1639 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 PTPDC1A2A3K4 754 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 GYG1P46976 350 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 KRT79Q5XKE5 535 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 GPCPD1Q9NPB8 672 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 TNS3Q68CZ2 1445 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 CDK12Q9NYV4 1490 aaPredicted RBP13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ERVV-1B6SEH8 477 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 SSR1P43307 286 aaKnown RBP13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ERCC4Q92889 916 aaPredicted RBP13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 USP40Q9NVE5 1235 aa13.95□□□□□ -0.18
ZKSCAN3-201ENST00000252211 CHRNDQ07001 517 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 PRKG1Q13976 671 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 UBE4AQ14139 1066 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 SPA17Q15506 151 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 EAPPQ56P03 285 aaPredicted RBP13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 FAM227BQ96M60 508 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 GREM2Q9H772 168 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 BBOX1O75936 387 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ECM2O94769 699 aaPredicted RBP13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 FAM114A1Q8IWE2 563 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 TGFBRAP1Q8WUH2 860 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ANGEL1Q9UNK9 670 aaKnown RBP13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 IVNS1ABPQ9Y6Y0 642 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 RNF17Q9BXT8 1623 aaKnown RBP13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 JCADQ9P266 1359 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ADGRB3O60242 1522 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 SGSM2O43147 1006 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 CCDC174Q6PII3 467 aa13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 FAM177A1Q8N128 213 aaPredicted RBP13.94□□□□□ -0.18
ZKSCAN3-201ENST00000252211 CYP27B1O15528 508 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 SLC1A4P43007 532 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 SNX21Q969T3 373 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 USP26Q9BXU7 913 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 NDUFB9Q9Y6M9 179 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 XDHP47989 1333 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ERLIN2O94905 339 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 TOP1P11387 765 aaKnown RBP13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ZNF804BA4D1E1 1349 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ZYXQ15942 572 aaKnown RBP13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 STX1AQ16623 288 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 DOK7Q18PE1 504 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 USP37Q86T82 979 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 KIAA0825Q8IV33 1275 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 TAF4BQ92750 862 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 NAP1L4Q99733 375 aaKnown RBP13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 COPRSQ9NQ92 184 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 BIN2Q9UBW5 565 aaPredicted RBP13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 NEBLO76041 1014 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 PDE8BO95263 885 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 BEGAINQ9BUH8 593 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 LEMD3Q9Y2U8 911 aa13.93□□□□□ -0.18
ZKSCAN3-201ENST00000252211 CAVIN2O95810 425 aa13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 MRPS27Q92552 414 aaKnown RBP13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 GLT8D2Q9H1C3 349 aa13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 SLC27A2O14975 620 aa13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ALKQ9UM73 1620 aa13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 BCAMP50895 628 aa13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 EAF2Q96CJ1 260 aaPredicted RBP13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 AXIN2Q9Y2T1 843 aa13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 CSADQ9Y600 493 aa13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 CDC42BPGQ6DT37 1551 aa13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 PPEF1O14829 653 aaPredicted RBP13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 MARCKSP29966 332 aaPredicted RBP13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 LRRC24Q50LG9 513 aa13.92□□□□□ -0.18
ZKSCAN3-201ENST00000252211 BACH1O14867 736 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 RPS6KB1P23443 525 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 BRAPQ7Z569 592 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 SPTLC2O15270 562 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 TRIM47Q96LD4 638 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 TCHPQ9BT92 498 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ARPP21Q9UBL0 812 aaPredicted RBP13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 CLTCL1P53675 1640 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 RPS6KA4O75676 772 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 F13A1P00488 732 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 AFMP43652 599 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 C8orf34Q49A92 452 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 TDRD12Q587J7 1177 aaKnown RBP13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 DCAF15Q66K64 600 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 NLRP10Q86W26 655 aa13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 GJD4Q96KN9 370 aaPredicted RBP13.91□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ZNF165P49910 485 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 PPP2R5BQ15173 497 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ENOX2Q16206 610 aaKnown RBP13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 PRAMEF22A3QJZ6 481 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 DEXIO95424 95 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 ASIC1P78348 528 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 NCBP1Q09161 790 aaKnown RBP13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 INTS4Q96HW7 963 aaKnown RBP13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 FCHSD1Q86WN1 690 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
ZKSCAN3-201ENST00000252211 USP8P40818 1118 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms