RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 FGAP02671 866 aa16.89■□□□□ 0.29
SDF2-201ENST00000247020 C2CD5Q86YS7 1000 aa16.89■□□□□ 0.29
SDF2-201ENST00000247020 SPRYD3Q8NCJ5 442 aa16.89■□□□□ 0.29
SDF2-201ENST00000247020 SH2B1Q9NRF2 756 aaPredicted RBP16.89■□□□□ 0.29
SDF2-201ENST00000247020 CYP7A1P22680 504 aa16.88■□□□□ 0.29
SDF2-201ENST00000247020 NAA16Q6N069 864 aaPredicted RBP16.88■□□□□ 0.29
SDF2-201ENST00000247020 CNKSR1Q969H4 720 aa16.88■□□□□ 0.29
SDF2-201ENST00000247020 SLX4Q8IY92 1834 aa16.87■□□□□ 0.29
SDF2-201ENST00000247020 MBD4O95243 580 aa16.87■□□□□ 0.29
SDF2-201ENST00000247020 MPNDQ8N594 471 aa16.87■□□□□ 0.29
SDF2-201ENST00000247020 NSUN4Q96CB9 384 aaKnown RBP16.87■□□□□ 0.29
SDF2-201ENST00000247020 CD209Q9NNX6 404 aa16.87■□□□□ 0.29
SDF2-201ENST00000247020 POLLQ9UGP5 575 aa16.87■□□□□ 0.29
SDF2-201ENST00000247020 E7EWF7 191 aa16.86■□□□□ 0.29
SDF2-201ENST00000247020 ZNF213O14771 459 aa16.86■□□□□ 0.29
SDF2-201ENST00000247020 POTEDQ86YR6 584 aa16.86■□□□□ 0.29
SDF2-201ENST00000247020 FBXL16Q8N461 479 aa16.86■□□□□ 0.29
SDF2-201ENST00000247020 NACAP1Q9BZK3 213 aa16.86■□□□□ 0.29
SDF2-201ENST00000247020 TAF6LQ9Y6J9 622 aa16.86■□□□□ 0.29
SDF2-201ENST00000247020 WDR19Q8NEZ3 1342 aa16.86■□□□□ 0.29
SDF2-201ENST00000247020 MAGEB6P1A0A0J9YX57 407 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 CC2D2BQ6DHV5 1058 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 DHX32Q7L7V1 743 aaKnown RBP16.85■□□□□ 0.29
SDF2-201ENST00000247020 CERS3Q8IU89 383 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 TBC1D22AQ8WUA7 517 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 EYA3Q99504 573 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 COA1Q9GZY4 146 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 C6orf229H3BNL8 230 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 GSTO1P78417 241 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 NUCB2P80303 420 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 CHAF1AQ13111 956 aaPredicted RBP16.85■□□□□ 0.29
SDF2-201ENST00000247020 GRIPAP1Q4V328 841 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 GIMAP6Q6P9H5 292 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 DPP8Q6V1X1 898 aaPredicted RBP16.85■□□□□ 0.29
SDF2-201ENST00000247020 STOX1Q6ZVD7 989 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 IFNL3Q8IZI9 196 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 ZNF622Q969S3 477 aaKnown RBP eCLIP16.85■□□□□ 0.29
SDF2-201ENST00000247020 AGXT2Q9BYV1 514 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 ARMT1Q9H993 441 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 LAMB1P07942 1786 aa16.85■□□□□ 0.29
SDF2-201ENST00000247020 FAM205AQ6ZU69 1335 aa16.84■□□□□ 0.29
SDF2-201ENST00000247020 MYH2Q9UKX2 1941 aa16.84■□□□□ 0.29
SDF2-201ENST00000247020 GSG1L2A8MUP6 293 aa16.84■□□□□ 0.29
SDF2-201ENST00000247020 CPA1P15085 419 aa16.84■□□□□ 0.29
SDF2-201ENST00000247020 MECOMQ03112 1051 aa16.84■□□□□ 0.29
SDF2-201ENST00000247020 LCORLQ8N3X6 602 aa16.84■□□□□ 0.29
SDF2-201ENST00000247020 RIOK1Q9BRS2 568 aaKnown RBP16.84■□□□□ 0.29
SDF2-201ENST00000247020 NAPBQ9H115 298 aa16.84■□□□□ 0.29
SDF2-201ENST00000247020 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.84■□□□□ 0.29
SDF2-201ENST00000247020 APPP05067 770 aa16.83■□□□□ 0.28
SDF2-201ENST00000247020 LDHBP07195 334 aaKnown RBP16.83■□□□□ 0.28
SDF2-201ENST00000247020 EXOSC10Q01780 885 aaKnown RBP16.83■□□□□ 0.28
SDF2-201ENST00000247020 RAB3GAP1Q15042 981 aa16.83■□□□□ 0.28
SDF2-201ENST00000247020 TTLL5Q6EMB2 1281 aa16.83■□□□□ 0.28
SDF2-201ENST00000247020 SLC51AQ86UW1 340 aa16.83■□□□□ 0.28
SDF2-201ENST00000247020 NCOA7Q8NI08 942 aa16.83■□□□□ 0.28
SDF2-201ENST00000247020 ZC3H12CQ9C0D7 883 aaKnown RBP16.83■□□□□ 0.28
SDF2-201ENST00000247020 SUGT1Q9Y2Z0 365 aa16.83■□□□□ 0.28
SDF2-201ENST00000247020 SLC4A4Q9Y6R1 1079 aa16.83■□□□□ 0.28
SDF2-201ENST00000247020 LDHCP07864 332 aa16.82■□□□□ 0.28
SDF2-201ENST00000247020 PRDX5P30044 214 aa16.82■□□□□ 0.28
SDF2-201ENST00000247020 TOB2Q14106 344 aaPredicted RBP16.82■□□□□ 0.28
SDF2-201ENST00000247020 ADGRA1Q86SQ6 560 aa16.82■□□□□ 0.28
SDF2-201ENST00000247020 DZIP1Q86YF9 867 aaKnown RBP16.82■□□□□ 0.28
SDF2-201ENST00000247020 ZNF384Q8TF68 577 aa16.82■□□□□ 0.28
SDF2-201ENST00000247020 ANP32EQ9BTT0 268 aa16.82■□□□□ 0.28
SDF2-201ENST00000247020 RTFDC1Q9BY42 306 aaPredicted RBP16.82■□□□□ 0.28
SDF2-201ENST00000247020 EPB41L4AQ9HCS5 686 aaPredicted RBP16.82■□□□□ 0.28
SDF2-201ENST00000247020 TRDNQ13061 729 aa16.81■□□□□ 0.28
SDF2-201ENST00000247020 NOL8Q76FK4 1167 aaKnown RBP16.81■□□□□ 0.28
SDF2-201ENST00000247020 CHMP4CQ96CF2 233 aa16.81■□□□□ 0.28
SDF2-201ENST00000247020 SNED1Q8TER0 1413 aa16.81■□□□□ 0.28
SDF2-201ENST00000247020 PDIA4P13667 645 aaKnown RBP16.81■□□□□ 0.28
SDF2-201ENST00000247020 MCM5P33992 734 aa16.81■□□□□ 0.28
SDF2-201ENST00000247020 Q6ZUG5 572 aa16.81■□□□□ 0.28
SDF2-201ENST00000247020 RALYLQ86SE5 291 aaKnown RBP16.81■□□□□ 0.28
SDF2-201ENST00000247020 SLF2Q8IX21 1173 aa16.81■□□□□ 0.28
SDF2-201ENST00000247020 MB21D2Q8IYB1 491 aaPredicted RBP16.81■□□□□ 0.28
SDF2-201ENST00000247020 MIGA1Q8NAN2 632 aa16.81■□□□□ 0.28
SDF2-201ENST00000247020 GPR101Q96P66 508 aaPredicted RBP16.81■□□□□ 0.28
SDF2-201ENST00000247020 FOXD4L1Q9NU39 408 aa16.81■□□□□ 0.28
SDF2-201ENST00000247020 CDK5RAP2Q96SN8 1893 aa16.8■□□□□ 0.28
SDF2-201ENST00000247020 BAZ2AQ9UIF9 1905 aaKnown RBP16.8■□□□□ 0.28
SDF2-201ENST00000247020 TDO2P48775 406 aa16.8■□□□□ 0.28
SDF2-201ENST00000247020 NFKBIBQ15653 356 aa16.8■□□□□ 0.28
SDF2-201ENST00000247020 SUPT20HQ8NEM7 779 aa16.8■□□□□ 0.28
SDF2-201ENST00000247020 C7orf43Q8WVR3 580 aa16.8■□□□□ 0.28
SDF2-201ENST00000247020 CRNKL1Q9BZJ0 848 aaKnown RBP16.8■□□□□ 0.28
SDF2-201ENST00000247020 PDGFDQ9GZP0 370 aaPredicted RBP16.8■□□□□ 0.28
SDF2-201ENST00000247020 CNNM2Q9H8M5 875 aa16.8■□□□□ 0.28
SDF2-201ENST00000247020 ATP8A2Q9NTI2 1148 aa16.8■□□□□ 0.28
SDF2-201ENST00000247020 ANAPC4Q9UJX5 808 aa16.8■□□□□ 0.28
SDF2-201ENST00000247020 TPCN1Q9ULQ1 816 aa16.8■□□□□ 0.28
SDF2-201ENST00000247020 ZNF646O15015 1829 aaPredicted RBP16.8■□□□□ 0.28
SDF2-201ENST00000247020 PSME4Q14997 1843 aa16.8■□□□□ 0.28
SDF2-201ENST00000247020 FOCADQ5VW36 1801 aa16.79■□□□□ 0.28
SDF2-201ENST00000247020 A0A0G2JLW4 131 aa16.79■□□□□ 0.28
SDF2-201ENST00000247020 PCP11498 1178 aaKnown RBP16.79■□□□□ 0.28
SDF2-201ENST00000247020 CHRNA5P30532 468 aa16.79■□□□□ 0.28
SDF2-201ENST00000247020 PPP4CP60510 307 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms