RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 YEATS4O95619 227 aa25.23■■□□□ 1.63
SH2D3A-201ENST00000245908 OTUD7BQ6GQQ9 843 aa25.23■■□□□ 1.63
SH2D3A-201ENST00000245908 BRAPQ7Z569 592 aa25.23■■□□□ 1.63
SH2D3A-201ENST00000245908 POLR3EQ9NVU0 708 aa25.23■■□□□ 1.63
SH2D3A-201ENST00000245908 CLIP2Q9UDT6 1046 aa25.23■■□□□ 1.63
SH2D3A-201ENST00000245908 DISP2A7MBM2 1401 aa25.23■■□□□ 1.63
SH2D3A-201ENST00000245908 LRP5O75197 1615 aa25.23■■□□□ 1.63
SH2D3A-201ENST00000245908 UBE3CQ15386 1083 aa25.22■■□□□ 1.63
SH2D3A-201ENST00000245908 SLC9C2Q5TAH2 1124 aa25.22■■□□□ 1.63
SH2D3A-201ENST00000245908 KCNG4Q8TDN1 519 aa25.22■■□□□ 1.63
SH2D3A-201ENST00000245908 MRFAP1L1Q96HT8 127 aa25.22■■□□□ 1.63
SH2D3A-201ENST00000245908 SLC4A9Q96Q91 983 aa25.22■■□□□ 1.63
SH2D3A-201ENST00000245908 ARAP2Q8WZ64 1704 aa25.22■■□□□ 1.63
SH2D3A-201ENST00000245908 CPLX1O14810 134 aa25.21■■□□□ 1.63
SH2D3A-201ENST00000245908 PDE8BO95263 885 aa25.21■■□□□ 1.63
SH2D3A-201ENST00000245908 LRMPQ12912 555 aa25.21■■□□□ 1.63
SH2D3A-201ENST00000245908 PIH1D3Q9NQM4 214 aaKnown RBP25.21■■□□□ 1.63
SH2D3A-201ENST00000245908 STK38Q15208 465 aa25.21■■□□□ 1.63
SH2D3A-201ENST00000245908 MYSM1Q5VVJ2 828 aa25.21■■□□□ 1.63
SH2D3A-201ENST00000245908 CLIC4Q9Y696 253 aa25.21■■□□□ 1.63
SH2D3A-201ENST00000245908 PDE8AO60658 829 aa25.2■■□□□ 1.63
SH2D3A-201ENST00000245908 ARID4AP29374 1257 aaPredicted RBP25.2■■□□□ 1.63
SH2D3A-201ENST00000245908 DMTNQ08495 405 aa25.2■■□□□ 1.63
SH2D3A-201ENST00000245908 TRDNQ13061 729 aa25.2■■□□□ 1.63
SH2D3A-201ENST00000245908 TRMT112Q9UI30 125 aaKnown RBP25.2■■□□□ 1.63
SH2D3A-201ENST00000245908 ZNF335Q9H4Z2 1342 aaPredicted RBP25.2■■□□□ 1.62
SH2D3A-201ENST00000245908 DHX40Q8IX18 779 aaKnown RBP25.2■■□□□ 1.62
SH2D3A-201ENST00000245908 ZBTB1Q9Y2K1 713 aa25.2■■□□□ 1.62
SH2D3A-201ENST00000245908 TBC1D10CQ8IV04 446 aa25.19■■□□□ 1.62
SH2D3A-201ENST00000245908 ANGEL1Q9UNK9 670 aaKnown RBP25.19■■□□□ 1.62
SH2D3A-201ENST00000245908 ZMYM6O95789 1325 aa25.19■■□□□ 1.62
SH2D3A-201ENST00000245908 POLR3DP05423 398 aaPredicted RBP25.19■■□□□ 1.62
SH2D3A-201ENST00000245908 UQCRFS1P1P0C7P4 283 aa25.19■■□□□ 1.62
SH2D3A-201ENST00000245908 CHAF1AQ13111 956 aaPredicted RBP25.19■■□□□ 1.62
SH2D3A-201ENST00000245908 RAB11FIP4Q86YS3 637 aa25.19■■□□□ 1.62
SH2D3A-201ENST00000245908 CEP57L1Q8IYX8 460 aa25.19■■□□□ 1.62
SH2D3A-201ENST00000245908 BTG4Q9NY30 223 aa25.19■■□□□ 1.62
SH2D3A-201ENST00000245908 BECN2A8MW95 431 aa25.18■■□□□ 1.62
SH2D3A-201ENST00000245908 ERVV-1B6SEH8 477 aa25.18■■□□□ 1.62
SH2D3A-201ENST00000245908 SPTLC2O15270 562 aa25.18■■□□□ 1.62
SH2D3A-201ENST00000245908 KIF23Q02241 960 aaPredicted RBP25.18■■□□□ 1.62
SH2D3A-201ENST00000245908 SF3A1Q15459 793 aaKnown RBP25.18■■□□□ 1.62
SH2D3A-201ENST00000245908 CCDC144BQ3MJ40 725 aa25.18■■□□□ 1.62
SH2D3A-201ENST00000245908 CCDC102BQ68D86 513 aa25.18■■□□□ 1.62
SH2D3A-201ENST00000245908 CCDC144CPQ8IYA2 1237 aa25.18■■□□□ 1.62
SH2D3A-201ENST00000245908 A0A1B0GVL5 298 aa25.17■■□□□ 1.62
SH2D3A-201ENST00000245908 PHKA1P46020 1223 aa25.17■■□□□ 1.62
SH2D3A-201ENST00000245908 NDUFA8P51970 172 aa25.17■■□□□ 1.62
SH2D3A-201ENST00000245908 ZNF532Q9HCE3 1301 aa25.17■■□□□ 1.62
SH2D3A-201ENST00000245908 PLCH1Q4KWH8 1693 aa25.17■■□□□ 1.62
SH2D3A-201ENST00000245908 KIF28PB7ZC32 967 aa25.17■■□□□ 1.62
SH2D3A-201ENST00000245908 SH2B2O14492 632 aaPredicted RBP25.17■■□□□ 1.62
SH2D3A-201ENST00000245908 IDH1O75874 414 aaKnown RBP25.17■■□□□ 1.62
SH2D3A-201ENST00000245908 PDE6AP16499 860 aa25.17■■□□□ 1.62
SH2D3A-201ENST00000245908 CYB5R4Q7L1T6 521 aa25.17■■□□□ 1.62
SH2D3A-201ENST00000245908 CACTINQ8WUQ7 758 aaKnown RBP25.17■■□□□ 1.62
SH2D3A-201ENST00000245908 TCRBV5S4A2TA0A5A2 114 aa25.16■■□□□ 1.62
SH2D3A-201ENST00000245908 DENND2AQ9ULE3 1009 aa25.16■■□□□ 1.62
SH2D3A-201ENST00000245908 TBC1D2BQ9UPU7 963 aa25.16■■□□□ 1.62
SH2D3A-201ENST00000245908 SDF4Q9BRK5 362 aa25.16■■□□□ 1.62
SH2D3A-201ENST00000245908 NAT10Q9H0A0 1025 aaKnown RBP25.16■■□□□ 1.62
SH2D3A-201ENST00000245908 GJB4Q9NTQ9 266 aa25.16■■□□□ 1.62
SH2D3A-201ENST00000245908 FGFR2P21802 821 aa25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 NEDD4P46934 1319 aa25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 PUM3Q15397 648 aaKnown RBP25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 DOCK2Q92608 1830 aa25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 ECM29Q5VYK3 1845 aa25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 COL14A1Q05707 1796 aaKnown RBP25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 UBN2Q6ZU65 1347 aa25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 A0A087WWV3 80 aa25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 IL6STP40189 918 aaPredicted RBP25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 ANO1Q5XXA6 986 aa25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 SYNE3Q6ZMZ3 975 aa25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 NKX2-3Q8TAU0 364 aa25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 LPIN2Q92539 896 aa25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 WWC3Q9ULE0 1092 aa25.15■■□□□ 1.62
SH2D3A-201ENST00000245908 MROH5Q6ZUA9 1318 aa25.14■■□□□ 1.62
SH2D3A-201ENST00000245908 METAP2P50579 478 aaKnown RBP eCLIP25.14■■□□□ 1.62
SH2D3A-201ENST00000245908 ALX1Q15699 326 aa25.14■■□□□ 1.62
SH2D3A-201ENST00000245908 DZIP3Q86Y13 1208 aaKnown RBP25.14■■□□□ 1.62
SH2D3A-201ENST00000245908 ZNF34Q8IZ26 560 aa25.14■■□□□ 1.62
SH2D3A-201ENST00000245908 KIAA1468Q9P260 1216 aa25.14■■□□□ 1.62
SH2D3A-201ENST00000245908 NEMFO60524 1076 aa25.14■■□□□ 1.61
SH2D3A-201ENST00000245908 CDKL5O76039 1030 aa25.14■■□□□ 1.61
SH2D3A-201ENST00000245908 TMEM87BQ96K49 555 aa25.14■■□□□ 1.61
SH2D3A-201ENST00000245908 RIOK3O14730 519 aaKnown RBP25.13■■□□□ 1.61
SH2D3A-201ENST00000245908 APPP05067 770 aa25.13■■□□□ 1.61
SH2D3A-201ENST00000245908 APOA5Q6Q788 366 aa25.13■■□□□ 1.61
SH2D3A-201ENST00000245908 ZNF710Q8N1W2 664 aa25.13■■□□□ 1.61
SH2D3A-201ENST00000245908 AOPEPQ8N6M6 819 aa25.13■■□□□ 1.61
SH2D3A-201ENST00000245908 ERCC4Q92889 916 aaPredicted RBP25.13■■□□□ 1.61
SH2D3A-201ENST00000245908 AK7Q96M32 723 aa25.13■■□□□ 1.61
SH2D3A-201ENST00000245908 STRBPQ96SI9 672 aaKnown RBP25.13■■□□□ 1.61
SH2D3A-201ENST00000245908 SLIT2O94813 1529 aa25.13■■□□□ 1.61
SH2D3A-201ENST00000245908 AXDND1Q5T1B0 1012 aaPredicted RBP25.12■■□□□ 1.61
SH2D3A-201ENST00000245908 LRRC8AQ8IWT6 810 aa25.12■■□□□ 1.61
SH2D3A-201ENST00000245908 TSC1Q92574 1164 aa25.12■■□□□ 1.61
SH2D3A-201ENST00000245908 BPIFA3Q9BQP9 254 aa25.12■■□□□ 1.61
SH2D3A-201ENST00000245908 ZSCAN20P17040 1043 aaPredicted RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms