RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 SP8Q8IXZ3 490 aa21.31■■□□□ 1
KLHDC3-201ENST00000244670 TBC1D16Q8TBP0 767 aa21.31■■□□□ 1
KLHDC3-201ENST00000244670 ZNF622Q969S3 477 aaKnown RBP eCLIP21.31■■□□□ 1
KLHDC3-201ENST00000244670 MASTLQ96GX5 879 aa21.31■■□□□ 1
KLHDC3-201ENST00000244670 GBP4Q96PP9 640 aa21.31■■□□□ 1
KLHDC3-201ENST00000244670 ZDHHC9Q9Y397 364 aa21.31■■□□□ 1
KLHDC3-201ENST00000244670 PDS5AQ29RF7 1337 aaKnown RBP21.31■■□□□ 1
KLHDC3-201ENST00000244670 C6orf229H3BNL8 230 aa21.31■■□□□ 1
KLHDC3-201ENST00000244670 C2CD5Q86YS7 1000 aa21.31■■□□□ 1
KLHDC3-201ENST00000244670 LRRC2Q9BYS8 371 aa21.31■■□□□ 1
KLHDC3-201ENST00000244670 PODXL2Q9NZ53 605 aa21.31■■□□□ 1
KLHDC3-201ENST00000244670 ATP6V0A2Q9Y487 856 aa21.31■■□□□ 1
KLHDC3-201ENST00000244670 DDX11L8A8MPP1 907 aa21.3■■□□□ 1
KLHDC3-201ENST00000244670 PRKAB2O43741 272 aa21.3■■□□□ 1
KLHDC3-201ENST00000244670 PRDX5P30044 214 aa21.3■■□□□ 1
KLHDC3-201ENST00000244670 TOB2Q14106 344 aaPredicted RBP21.3■■□□□ 1
KLHDC3-201ENST00000244670 CLEC17AQ6ZS10 378 aa21.3■■□□□ 1
KLHDC3-201ENST00000244670 TMC4Q7Z404 712 aa21.3■■□□□ 1
KLHDC3-201ENST00000244670 ZNF384Q8TF68 577 aa21.3■■□□□ 1
KLHDC3-201ENST00000244670 TPCN1Q9ULQ1 816 aa21.3■■□□□ 1
KLHDC3-201ENST00000244670 ALDH1B1P30837 517 aa21.29■■□□□ 1
KLHDC3-201ENST00000244670 NAA16Q6N069 864 aaPredicted RBP21.29■■□□□ 1
KLHDC3-201ENST00000244670 C15orf52Q6ZUT6 534 aaKnown RBP21.29■■□□□ 1
KLHDC3-201ENST00000244670 EPB41L4AQ9HCS5 686 aaPredicted RBP21.29■■□□□ 1
KLHDC3-201ENST00000244670 CCDC88AQ3V6T2 1871 aa21.29■■□□□ 1
KLHDC3-201ENST00000244670 ZNF213O14771 459 aa21.29■■□□□ 1
KLHDC3-201ENST00000244670 ME3Q16798 604 aa21.29■■□□□ 1
KLHDC3-201ENST00000244670 Q6ZUG5 572 aa21.29■■□□□ 1
KLHDC3-201ENST00000244670 TDRD7Q8NHU6 1098 aaKnown RBP21.29■■□□□ 1
KLHDC3-201ENST00000244670 SLC4A4Q9Y6R1 1079 aa21.29■■□□□ 1
KLHDC3-201ENST00000244670 PATL2C9JE40 543 aaKnown RBP21.28■■□□□ 1
KLHDC3-201ENST00000244670 MECOMQ03112 1051 aa21.28■■□□□ 1
KLHDC3-201ENST00000244670 CCDC83Q8IWF9 413 aa21.28■■□□□ 1
KLHDC3-201ENST00000244670 NSUN4Q96CB9 384 aaKnown RBP21.28■■□□□ 1
KLHDC3-201ENST00000244670 MAGEB6P1A0A0J9YX57 407 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 BAG4O95429 457 aaKnown RBP21.27■■□□□ 1
KLHDC3-201ENST00000244670 CHRNA5P30532 468 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 CHST3Q7LGC8 479 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 IFNL3Q8IZI9 196 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 ZSCAN31Q96LW9 406 aaPredicted RBP21.27■■□□□ 1
KLHDC3-201ENST00000244670 ALDH8A1Q9H2A2 487 aaPredicted RBP21.27■■□□□ 1
KLHDC3-201ENST00000244670 CD209Q9NNX6 404 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 MAST2Q6P0Q8 1798 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 GSG1L2A8MUP6 293 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 H0YIN7 160 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 DTNBO60941 627 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 HMGB1P09429 215 aaKnown RBP21.27■■□□□ 1
KLHDC3-201ENST00000244670 DYNLL1P63167 89 aaKnown RBP21.27■■□□□ 1
KLHDC3-201ENST00000244670 ANKRD1Q15327 319 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 DHX32Q7L7V1 743 aaKnown RBP21.27■■□□□ 1
KLHDC3-201ENST00000244670 NECAB1Q8N987 351 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 NBPF3Q9H094 633 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 NAPBQ9H115 298 aa21.27■■□□□ 1
KLHDC3-201ENST00000244670 RIMBP2O15034 1052 aa21.26■□□□□ 0.99
KLHDC3-201ENST00000244670 FGD1P98174 961 aa21.26■□□□□ 0.99
KLHDC3-201ENST00000244670 ST3GAL1Q11201 340 aa21.25■□□□□ 0.99
KLHDC3-201ENST00000244670 TBC1D10CQ8IV04 446 aa21.25■□□□□ 0.99
KLHDC3-201ENST00000244670 MPNDQ8N594 471 aa21.25■□□□□ 0.99
KLHDC3-201ENST00000244670 RIOK1Q9BRS2 568 aaKnown RBP21.25■□□□□ 0.99
KLHDC3-201ENST00000244670 SH2B1Q9NRF2 756 aaPredicted RBP21.25■□□□□ 0.99
KLHDC3-201ENST00000244670 DUOX1Q9NRD9 1551 aa21.25■□□□□ 0.99
KLHDC3-201ENST00000244670 TRAK2O60296 914 aa21.25■□□□□ 0.99
KLHDC3-201ENST00000244670 GNAT2P19087 354 aa21.25■□□□□ 0.99
KLHDC3-201ENST00000244670 WDR66Q8TBY9 1149 aa21.25■□□□□ 0.99
KLHDC3-201ENST00000244670 SDR42E1Q8WUS8 393 aa21.25■□□□□ 0.99
KLHDC3-201ENST00000244670 BRF1Q92994 677 aa21.25■□□□□ 0.99
KLHDC3-201ENST00000244670 ZNF219Q9P2Y4 722 aaPredicted RBP21.25■□□□□ 0.99
KLHDC3-201ENST00000244670 CHD4Q14839 1912 aa21.24■□□□□ 0.99
KLHDC3-201ENST00000244670 TDO2P48775 406 aa21.24■□□□□ 0.99
KLHDC3-201ENST00000244670 EXOSC10Q01780 885 aaKnown RBP21.24■□□□□ 0.99
KLHDC3-201ENST00000244670 STK3Q13188 491 aa21.24■□□□□ 0.99
KLHDC3-201ENST00000244670 ALX1Q15699 326 aa21.24■□□□□ 0.99
KLHDC3-201ENST00000244670 GRIK5Q16478 980 aa21.24■□□□□ 0.99
KLHDC3-201ENST00000244670 DPP8Q6V1X1 898 aaPredicted RBP21.24■□□□□ 0.99
KLHDC3-201ENST00000244670 DZIP1Q86YF9 867 aaKnown RBP21.24■□□□□ 0.99
KLHDC3-201ENST00000244670 SLX4Q8IY92 1834 aa21.24■□□□□ 0.99
KLHDC3-201ENST00000244670 IL1R1P14778 569 aa21.23■□□□□ 0.99
KLHDC3-201ENST00000244670 SPTY2D1Q68D10 685 aaPredicted RBP21.23■□□□□ 0.99
KLHDC3-201ENST00000244670 SALL1Q9NSC2 1324 aa21.23■□□□□ 0.99
KLHDC3-201ENST00000244670 ZBTB22O15209 634 aa21.23■□□□□ 0.99
KLHDC3-201ENST00000244670 BRD1O95696 1058 aa21.23■□□□□ 0.99
KLHDC3-201ENST00000244670 LDHBP07195 334 aaKnown RBP21.23■□□□□ 0.99
KLHDC3-201ENST00000244670 NACAP1Q9BZK3 213 aa21.23■□□□□ 0.99
KLHDC3-201ENST00000244670 TMX4Q9H1E5 349 aaPredicted RBP21.23■□□□□ 0.99
KLHDC3-201ENST00000244670 AATFQ9NY61 560 aaKnown RBP eCLIP21.23■□□□□ 0.99
KLHDC3-201ENST00000244670 ZMYM6O95789 1325 aa21.22■□□□□ 0.99
KLHDC3-201ENST00000244670 CTDSPL2Q05D32 466 aa21.22■□□□□ 0.99
KLHDC3-201ENST00000244670 STYK1Q6J9G0 422 aa21.22■□□□□ 0.99
KLHDC3-201ENST00000244670 RALYLQ86SE5 291 aaKnown RBP21.22■□□□□ 0.99
KLHDC3-201ENST00000244670 NCOA7Q8NI08 942 aa21.22■□□□□ 0.99
KLHDC3-201ENST00000244670 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.22■□□□□ 0.99
KLHDC3-201ENST00000244670 BAZ2AQ9UIF9 1905 aaKnown RBP21.22■□□□□ 0.99
KLHDC3-201ENST00000244670 FOXD4L5Q5VV16 416 aaPredicted RBP21.21■□□□□ 0.99
KLHDC3-201ENST00000244670 MB21D2Q8IYB1 491 aaPredicted RBP21.21■□□□□ 0.99
KLHDC3-201ENST00000244670 FOXD4L4Q8WXT5 416 aaPredicted RBP21.21■□□□□ 0.99
KLHDC3-201ENST00000244670 APOBRQ0VD83 1088 aa21.21■□□□□ 0.99
KLHDC3-201ENST00000244670 NKX2-3Q8TAU0 364 aa21.21■□□□□ 0.99
KLHDC3-201ENST00000244670 INCENPQ9NQS7 918 aa21.21■□□□□ 0.99
KLHDC3-201ENST00000244670 SMC3Q9UQE7 1217 aa21.21■□□□□ 0.99
KLHDC3-201ENST00000244670 STK11IPQ8N1F8 1099 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms