RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 IDI1Q13907 227 aa10.08□□□□□ -0.8
CXCR4-201ENST00000241393 CCINQ13939 588 aa10.08□□□□□ -0.8
CXCR4-201ENST00000241393 C20orf194Q5TEA3 1177 aa10.08□□□□□ -0.8
CXCR4-201ENST00000241393 TMEM132EQ6IEE7 984 aa10.08□□□□□ -0.8
CXCR4-201ENST00000241393 SV2AQ7L0J3 742 aa10.08□□□□□ -0.8
CXCR4-201ENST00000241393 WDR63Q8IWG1 891 aa10.08□□□□□ -0.8
CXCR4-201ENST00000241393 FBF1Q8TES7 1133 aa10.08□□□□□ -0.8
CXCR4-201ENST00000241393 MED14O60244 1454 aa10.07□□□□□ -0.8
CXCR4-201ENST00000241393 YEATS2Q9ULM3 1422 aa10.07□□□□□ -0.8
CXCR4-201ENST00000241393 EFSO43281 561 aa10.07□□□□□ -0.8
CXCR4-201ENST00000241393 LDHBP07195 334 aaKnown RBP10.07□□□□□ -0.8
CXCR4-201ENST00000241393 P4HBP07237 508 aaKnown RBP10.07□□□□□ -0.8
CXCR4-201ENST00000241393 TNP2Q05952 138 aa10.07□□□□□ -0.8
CXCR4-201ENST00000241393 DBN1Q16643 649 aa10.07□□□□□ -0.8
CXCR4-201ENST00000241393 ZNF837Q96EG3 531 aaPredicted RBP10.07□□□□□ -0.8
CXCR4-201ENST00000241393 GGNBP2Q9H3C7 697 aa10.07□□□□□ -0.8
CXCR4-201ENST00000241393 ELP3Q9H9T3 547 aa10.07□□□□□ -0.8
CXCR4-201ENST00000241393 CLTCQ00610 1675 aaKnown RBP10.07□□□□□ -0.8
CXCR4-201ENST00000241393 ABCC11Q96J66 1382 aa10.07□□□□□ -0.8
CXCR4-201ENST00000241393 DCDC2BA2VCK2 349 aa10.06□□□□□ -0.8
CXCR4-201ENST00000241393 CPNE3O75131 537 aaKnown RBP10.06□□□□□ -0.8
CXCR4-201ENST00000241393 PRPF40AO75400 957 aaKnown RBP10.06□□□□□ -0.8
CXCR4-201ENST00000241393 MAPTP10636 758 aaKnown RBP10.06□□□□□ -0.8
CXCR4-201ENST00000241393 ZNF16P17020 682 aaPredicted RBP10.06□□□□□ -0.8
CXCR4-201ENST00000241393 FBXO33Q7Z6M2 555 aa10.06□□□□□ -0.8
CXCR4-201ENST00000241393 FRMD6Q96NE9 622 aa10.06□□□□□ -0.8
CXCR4-201ENST00000241393 CSRNP1Q96S65 589 aa10.06□□□□□ -0.8
CXCR4-201ENST00000241393 KCNMB2Q9Y691 235 aa10.06□□□□□ -0.8
CXCR4-201ENST00000241393 CDC14CA4D256 554 aa10.06□□□□□ -0.8
CXCR4-201ENST00000241393 PHACTR2O75167 634 aa10.06□□□□□ -0.8
CXCR4-201ENST00000241393 XPCQ01831 940 aaPredicted RBP10.06□□□□□ -0.8
CXCR4-201ENST00000241393 ENOX2Q16206 610 aaKnown RBP10.06□□□□□ -0.8
CXCR4-201ENST00000241393 GTPBP3Q969Y2 492 aaKnown RBP10.06□□□□□ -0.8
CXCR4-201ENST00000241393 KLRG1Q96E93 195 aa10.06□□□□□ -0.8
CXCR4-201ENST00000241393 PTPRMP28827 1452 aa10.05□□□□□ -0.8
CXCR4-201ENST00000241393 PPFIA3O75145 1194 aa10.05□□□□□ -0.8
CXCR4-201ENST00000241393 FAM182BQ5T319 152 aa10.05□□□□□ -0.8
CXCR4-201ENST00000241393 NPAS3Q8IXF0 933 aa10.05□□□□□ -0.8
CXCR4-201ENST00000241393 ABI2Q9NYB9 513 aaPredicted RBP10.05□□□□□ -0.8
CXCR4-201ENST00000241393 NSFL1CQ9UNZ2 370 aaKnown RBP10.05□□□□□ -0.8
CXCR4-201ENST00000241393 ADGRB2O60241 1585 aa10.04□□□□□ -0.8
CXCR4-201ENST00000241393 PNMA6FA0A0J9YX94 578 aa10.04□□□□□ -0.8
CXCR4-201ENST00000241393 MTHFSP49914 203 aa10.04□□□□□ -0.8
CXCR4-201ENST00000241393 CYB5RLQ6IPT4 315 aa10.04□□□□□ -0.8
CXCR4-201ENST00000241393 YTHDC2Q9H6S0 1430 aaKnown RBP10.04□□□□□ -0.8
CXCR4-201ENST00000241393 DLC1Q96QB1 1528 aa10.04□□□□□ -0.8
CXCR4-201ENST00000241393 BNIP3LO60238 219 aa10.03□□□□□ -0.8
CXCR4-201ENST00000241393 TNFRSF21O75509 655 aa10.03□□□□□ -0.8
CXCR4-201ENST00000241393 IGHA2P01877 340 aa10.03□□□□□ -0.8
CXCR4-201ENST00000241393 CT47B1P0C2W7 299 aaPredicted RBP10.03□□□□□ -0.8
CXCR4-201ENST00000241393 TCP11L2Q8N4U5 519 aa10.03□□□□□ -0.8
CXCR4-201ENST00000241393 NANOS1Q8WY41 292 aaKnown RBP10.03□□□□□ -0.8
CXCR4-201ENST00000241393 NDFIP2Q9NV92 336 aa10.03□□□□□ -0.8
CXCR4-201ENST00000241393 USP20Q9Y2K6 914 aa10.03□□□□□ -0.8
CXCR4-201ENST00000241393 ANKRD26Q9UPS8 1709 aa10.03□□□□□ -0.8
CXCR4-201ENST00000241393 FGFR3P22607 806 aa10.02□□□□□ -0.8
CXCR4-201ENST00000241393 SFSWAPQ12872 951 aaKnown RBP10.02□□□□□ -0.8
CXCR4-201ENST00000241393 TRIP4Q15650 581 aaPredicted RBP10.02□□□□□ -0.8
CXCR4-201ENST00000241393 PCSK7Q16549 785 aa10.02□□□□□ -0.8
CXCR4-201ENST00000241393 ABHD17AQ96GS6 310 aa10.02□□□□□ -0.8
CXCR4-201ENST00000241393 TERF2IPQ9NYB0 399 aa10.02□□□□□ -0.8
CXCR4-201ENST00000241393 A0A1W2PP64 1363 aa10.02□□□□□ -0.8
CXCR4-201ENST00000241393 DIP2BQ9P265 1576 aa10.02□□□□□ -0.81
CXCR4-201ENST00000241393 MYO5BQ9ULV0 1848 aa10.02□□□□□ -0.81
CXCR4-201ENST00000241393 PHF20L1A8MW92 1017 aa10.02□□□□□ -0.81
CXCR4-201ENST00000241393 EIF1AYO14602 144 aaKnown RBP10.02□□□□□ -0.81
CXCR4-201ENST00000241393 SPEM2Q0P670 501 aa10.02□□□□□ -0.81
CXCR4-201ENST00000241393 GSX2Q9BZM3 304 aa10.02□□□□□ -0.81
CXCR4-201ENST00000241393 MYH16Q9H6N6 1097 aa10.02□□□□□ -0.81
CXCR4-201ENST00000241393 CUEDC1Q9NWM3 386 aaPredicted RBP10.02□□□□□ -0.81
CXCR4-201ENST00000241393 PRR12Q9ULL5 1215 aa10.02□□□□□ -0.81
CXCR4-201ENST00000241393 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.02□□□□□ -0.81
CXCR4-201ENST00000241393 ZMYM3Q14202 1370 aa10.02□□□□□ -0.81
CXCR4-201ENST00000241393 ALKQ9UM73 1620 aa10.02□□□□□ -0.81
CXCR4-201ENST00000241393 BCAR3O75815 825 aa10.01□□□□□ -0.81
CXCR4-201ENST00000241393 PSAPP07602 524 aa10.01□□□□□ -0.81
CXCR4-201ENST00000241393 RARAP10276 462 aa10.01□□□□□ -0.81
CXCR4-201ENST00000241393 UBAP2LQ14157 1087 aaKnown RBP10.01□□□□□ -0.81
CXCR4-201ENST00000241393 SPG7Q9UQ90 795 aa10.01□□□□□ -0.81
CXCR4-201ENST00000241393 COL3A1P02461 1466 aaPredicted RBP10.01□□□□□ -0.81
CXCR4-201ENST00000241393 NLRP1Q9C000 1473 aa10.01□□□□□ -0.81
CXCR4-201ENST00000241393 SPATA31D1Q6ZQQ2 1576 aa10.01□□□□□ -0.81
CXCR4-201ENST00000241393 ARHGEF40Q8TER5 1519 aa10□□□□□ -0.81
CXCR4-201ENST00000241393 GIPC1O14908 333 aa10□□□□□ -0.81
CXCR4-201ENST00000241393 MAP3K6O95382 1288 aa10□□□□□ -0.81
CXCR4-201ENST00000241393 RARSP54136 660 aaKnown RBP10□□□□□ -0.81
CXCR4-201ENST00000241393 VWA5B2Q8N398 1253 aa10□□□□□ -0.81
CXCR4-201ENST00000241393 ZFYVE28Q9HCC9 887 aa10□□□□□ -0.81
CXCR4-201ENST00000241393 NLRP2Q9NX02 1062 aa10□□□□□ -0.81
CXCR4-201ENST00000241393 NXF1Q9UBU9 619 aaKnown RBP10□□□□□ -0.81
CXCR4-201ENST00000241393 CD163L1Q9NR16 1453 aa9.99□□□□□ -0.81
CXCR4-201ENST00000241393 CES1P23141 567 aa9.99□□□□□ -0.81
CXCR4-201ENST00000241393 PNNQ9H307 717 aaKnown RBP9.99□□□□□ -0.81
CXCR4-201ENST00000241393 IL16Q14005 1332 aa9.99□□□□□ -0.81
CXCR4-201ENST00000241393 MAPK8IP3Q9UPT6 1336 aa9.99□□□□□ -0.81
CXCR4-201ENST00000241393 PNPLA6Q8IY17 1366 aa9.99□□□□□ -0.81
CXCR4-201ENST00000241393 A6NHS1 94 aa9.99□□□□□ -0.81
CXCR4-201ENST00000241393 SASH3O75995 380 aa9.99□□□□□ -0.81
CXCR4-201ENST00000241393 THBS1P07996 1170 aa9.99□□□□□ -0.81
CXCR4-201ENST00000241393 EDN3P14138 238 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms