RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 EPB41L2O43491 1005 aaKnown RBP12.12□□□□□ -0.47
PRAMEF4-201ENST00000235349 CD2BP2O95400 341 aaKnown RBP12.12□□□□□ -0.47
PRAMEF4-201ENST00000235349 PRDX5P30044 214 aa12.12□□□□□ -0.47
PRAMEF4-201ENST00000235349 ZC3H12CQ9C0D7 883 aaKnown RBP12.12□□□□□ -0.47
PRAMEF4-201ENST00000235349 KCNQ5Q9NR82 932 aa12.12□□□□□ -0.47
PRAMEF4-201ENST00000235349 GPAA1O43292 621 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 HSPD1P10809 573 aaKnown RBP12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 CYP7A1P22680 504 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 TGFB2P61812 414 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 CREB3L3Q68CJ9 461 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 SNED1Q8TER0 1413 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 SLC27A2O14975 620 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 ZBTB22O15209 634 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 MCCP23508 829 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 MECOMQ03112 1051 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 COL9A3Q14050 684 aaPredicted RBP12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 TTLL5Q6EMB2 1281 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 MIGA1Q8NAN2 632 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 KCNB2Q92953 911 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 RTFDC1Q9BY42 306 aaPredicted RBP12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 ARMT1Q9H993 441 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 SCN9AQ15858 1988 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 MYH2Q9UKX2 1941 aa12.11□□□□□ -0.47
PRAMEF4-201ENST00000235349 BRCA1P38398 1863 aaKnown RBP12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 MBD4O95243 580 aa12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 TPM2P07951 284 aa12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 XRCC6P12956 609 aaKnown RBP eCLIP12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 GTF2IP78347 998 aa12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 WDR66Q8TBY9 1149 aa12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 NSUN4Q96CB9 384 aaKnown RBP12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 NAP1L5Q96NT1 182 aaPredicted RBP12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 STRBPQ96SI9 672 aaKnown RBP12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 MXD3Q9BW11 206 aa12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 COA1Q9GZY4 146 aa12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 DBNDD1Q9H9R9 158 aa12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 PIM2Q9P1W9 311 aa12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 UTRNP46939 3433 aa12.1□□□□□ -0.47
PRAMEF4-201ENST00000235349 PRKAB2O43741 272 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 ANAPC15P60006 121 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 DYNLL1P63167 89 aaKnown RBP12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 SKOR2Q2VWA4 1001 aaPredicted RBP12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 ADCK5Q3MIX3 580 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 IL17RAQ96F46 866 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 DSCC1Q9BVC3 393 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 FGAP02671 866 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 CPA1P15085 419 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 RABEP1Q15276 862 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 AOC3Q16853 763 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 CC2D2BQ6DHV5 1058 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 HSCBQ8IWL3 235 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 LCORLQ8N3X6 602 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 NLGN2Q8NFZ4 835 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 SNX21Q969T3 373 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 EYA3Q99504 573 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 UPF3BQ9BZI7 483 aaKnown RBP12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 PDCL3Q9H2J4 239 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 CD2APQ9Y5K6 639 aa12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
PRAMEF4-201ENST00000235349 FAM205AQ6ZU69 1335 aa12.08□□□□□ -0.48
PRAMEF4-201ENST00000235349 SALL1Q9NSC2 1324 aa12.08□□□□□ -0.48
PRAMEF4-201ENST00000235349 TRAK2O60296 914 aa12.08□□□□□ -0.48
PRAMEF4-201ENST00000235349 LDHBP07195 334 aaKnown RBP12.08□□□□□ -0.48
PRAMEF4-201ENST00000235349 CYP21A2P08686 494 aa12.08□□□□□ -0.48
PRAMEF4-201ENST00000235349 NEK4P51957 841 aa12.08□□□□□ -0.48
PRAMEF4-201ENST00000235349 DALRD3Q5D0E6 543 aaKnown RBP12.08□□□□□ -0.48
PRAMEF4-201ENST00000235349 AIDAQ96BJ3 306 aa12.08□□□□□ -0.48
PRAMEF4-201ENST00000235349 BAZ2AQ9UIF9 1905 aaKnown RBP12.08□□□□□ -0.48
PRAMEF4-201ENST00000235349 LAMA4Q16363 1823 aa12.08□□□□□ -0.48
PRAMEF4-201ENST00000235349 G3V3G9 751 aa12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 DIXDC1Q155Q3 683 aa12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 SPTY2D1Q68D10 685 aaPredicted RBP12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 CERS5Q8N5B7 392 aa12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 RIOK1Q9BRS2 568 aaKnown RBP12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 MAGEB6P1A0A0J9YX57 407 aa12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 GSG1L2A8MUP6 293 aa12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 APPP05067 770 aa12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 MFSD14BQ5SR56 506 aa12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 JAKMIP1Q96N16 626 aaKnown RBP12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 SPON1Q9HCB6 807 aa12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 ZNF277Q9NRM2 450 aaPredicted RBP12.07□□□□□ -0.48
PRAMEF4-201ENST00000235349 PATL2C9JE40 543 aaKnown RBP12.06□□□□□ -0.48
PRAMEF4-201ENST00000235349 ECE2O60344 883 aa12.06□□□□□ -0.48
PRAMEF4-201ENST00000235349 HAND2P61296 217 aa12.06□□□□□ -0.48
PRAMEF4-201ENST00000235349 KIAA2012Q0VF49 1180 aa12.06□□□□□ -0.48
PRAMEF4-201ENST00000235349 STOX1Q6ZVD7 989 aa12.06□□□□□ -0.48
PRAMEF4-201ENST00000235349 DZIP1Q86YF9 867 aaKnown RBP12.06□□□□□ -0.48
PRAMEF4-201ENST00000235349 ZGPATQ8N5A5 531 aaKnown RBP12.06□□□□□ -0.48
PRAMEF4-201ENST00000235349 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
PRAMEF4-201ENST00000235349 EPB41L4AQ9HCS5 686 aaPredicted RBP12.06□□□□□ -0.48
PRAMEF4-201ENST00000235349 AATFQ9NY61 560 aaKnown RBP eCLIP12.06□□□□□ -0.48
PRAMEF4-201ENST00000235349 FER1L6Q2WGJ9 1857 aa12.06□□□□□ -0.48
PRAMEF4-201ENST00000235349 YDJCA8MPS7 323 aa12.05□□□□□ -0.48
PRAMEF4-201ENST00000235349 PPIP5K2O43314 1243 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms