RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 MSL1Q68DK7 614 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 MCTP2Q6DN12 878 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 CNNM4Q6P4Q7 775 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 PAXIP1Q6ZW49 1069 aaPredicted RBP8.13□□□□□ -1.11
CPS1-201ENST00000233072 SV2BQ7L1I2 683 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 GSTA5Q7RTV2 222 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 CDAN1Q8IWY9 1227 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 KCNG1Q9UIX4 513 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 FRMD4BQ9Y2L6 1034 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 GCC2Q8IWJ2 1684 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 STX10O60499 249 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 DEXIO95424 95 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 NBPF14Q5TI25 921 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 IP6K1Q92551 441 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 SMC6Q96SB8 1091 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 NUP58Q9BVL2 599 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 ZMYM3Q14202 1370 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 CBX1P83916 185 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 RBM26Q5T8P6 1007 aaKnown RBP8.13□□□□□ -1.11
CPS1-201ENST00000233072 MAGEB6Q8N7X4 407 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 PLBD2Q8NHP8 589 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 DHX58Q96C10 678 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 PPM1FP49593 454 aaPredicted RBP8.13□□□□□ -1.11
CPS1-201ENST00000233072 UBXN1Q04323 297 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 RILPL1Q5EBL4 403 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 CCDC42Q96M95 316 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 TIGD1Q96MW7 591 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 ATP10AO60312 1499 aa8.13□□□□□ -1.11
CPS1-201ENST00000233072 PTPDC1A2A3K4 754 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 TYRO3Q06418 890 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 NOLC1Q14978 699 aaKnown RBP eCLIP8.12□□□□□ -1.11
CPS1-201ENST00000233072 TICAM2Q86XR7 235 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 ARHGEF10LQ9HCE6 1279 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 LMOD1P29536 600 aaPredicted RBP8.12□□□□□ -1.11
CPS1-201ENST00000233072 PUM3Q15397 648 aaKnown RBP8.12□□□□□ -1.11
CPS1-201ENST00000233072 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
CPS1-201ENST00000233072 CFAP58Q5T655 872 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 CCDC117Q8IWD4 279 aaPredicted RBP8.12□□□□□ -1.11
CPS1-201ENST00000233072 CCDC26Q8TAB7 109 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 DDX23Q9BUQ8 820 aaKnown RBP8.12□□□□□ -1.11
CPS1-201ENST00000233072 PICALMQ13492 652 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 WDR44Q5JSH3 913 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 GIMAP6Q6P9H5 292 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 MMRN2Q9H8L6 949 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 HOXC9P31274 260 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 NBPF11Q86T75 865 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 FCHSD1Q86WN1 690 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 TMX1Q9H3N1 280 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 C19orf44Q9H6X5 657 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 A0A1W2PP64 1363 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 GTF2A1P52655 376 aaPredicted RBP8.12□□□□□ -1.11
CPS1-201ENST00000233072 ERCC6LQ2NKX8 1250 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 LIN9Q5TKA1 542 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 GPR161Q8N6U8 529 aaKnown RBP8.12□□□□□ -1.11
CPS1-201ENST00000233072 MCM9Q9NXL9 1143 aa8.12□□□□□ -1.11
CPS1-201ENST00000233072 TTF2Q9UNY4 1162 aaKnown RBP8.12□□□□□ -1.11
CPS1-201ENST00000233072 HCLS1P14317 486 aaPredicted RBP8.11□□□□□ -1.11
CPS1-201ENST00000233072 RPS6KB1P23443 525 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 SMTNP53814 917 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 TFCP2Q12800 502 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 CCDC50Q8IVM0 306 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 GPATCH11Q8N954 259 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 NECAB1Q8N987 351 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 FBF1Q8TES7 1133 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 JDP2Q8WYK2 163 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 MAK16Q9BXY0 300 aaKnown RBP8.11□□□□□ -1.11
CPS1-201ENST00000233072 TSKSQ9UJT2 592 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 WDR66Q8TBY9 1149 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.11□□□□□ -1.11
CPS1-201ENST00000233072 ZNF219Q9P2Y4 722 aaPredicted RBP8.11□□□□□ -1.11
CPS1-201ENST00000233072 MROH5Q6ZUA9 1318 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 SSH2Q76I76 1423 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 EEF2P13639 858 aaKnown RBP8.11□□□□□ -1.11
CPS1-201ENST00000233072 AK2P54819 239 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 LRRC59Q96AG4 307 aaKnown RBP8.11□□□□□ -1.11
CPS1-201ENST00000233072 ZC3H12CQ9C0D7 883 aaKnown RBP8.11□□□□□ -1.11
CPS1-201ENST00000233072 DACT1Q9NYF0 836 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 TMOD4Q9NZQ9 345 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 ARHGEF5Q12774 1597 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 GTF2F1P35269 517 aaKnown RBP eCLIP8.11□□□□□ -1.11
CPS1-201ENST00000233072 SLC8A3P57103 927 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 MXRA7P84157 204 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 CCDC121Q6ZUS5 278 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 DAAM2Q86T65 1068 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 CCDC110Q8TBZ0 833 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 GDPD2Q9HCC8 539 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 SWAP70Q9UH65 585 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 ZKSCAN5Q9Y2L8 839 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 AKR1B15C9JRZ8 316 aaPredicted RBP8.11□□□□□ -1.11
CPS1-201ENST00000233072 STK10O94804 968 aaKnown RBP8.11□□□□□ -1.11
CPS1-201ENST00000233072 IRX3P78415 501 aaPredicted RBP8.11□□□□□ -1.11
CPS1-201ENST00000233072 MYL5Q02045 173 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 FAM160A1Q05DH4 1040 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 C8orf58Q8NAV2 365 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 METTL22Q9BUU2 404 aaPredicted RBP8.11□□□□□ -1.11
CPS1-201ENST00000233072 POLKQ9UBT6 870 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 PNMA2Q9UL42 364 aa8.11□□□□□ -1.11
CPS1-201ENST00000233072 ARID4AP29374 1257 aaPredicted RBP8.1□□□□□ -1.11
CPS1-201ENST00000233072 PDE6BP35913 854 aa8.1□□□□□ -1.11
CPS1-201ENST00000233072 MAP7D1Q3KQU3 841 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms