RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 SLC26A6Q9BXS9 759 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 GLT8D2Q9H1C3 349 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 GOPCQ9HD26 462 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 ATP10DQ9P241 1426 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 SPDYE3A6NKU9 549 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 RAB3GAP1Q15042 981 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 TTLL5Q6EMB2 1281 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 TSG101Q99816 390 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 ESYT1Q9BSJ8 1104 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 LUC7LQ9NQ29 371 aaKnown RBP9.23□□□□□ -0.93
NANOG-201ENST00000229307 ORC3Q9UBD5 711 aaPredicted RBP9.23□□□□□ -0.93
NANOG-201ENST00000229307 PNMA2Q9UL42 364 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 AXIN2Q9Y2T1 843 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 SAMM50Q9Y512 469 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 CIAO1O76071 339 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 R3HDM1Q15032 1099 aaKnown RBP9.23□□□□□ -0.93
NANOG-201ENST00000229307 TSHZ3Q63HK5 1081 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 ATG3Q9NT62 314 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 CARMIL3Q8ND23 1372 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 ITSN1Q15811 1721 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 PARP1P09874 1014 aaKnown RBP9.23□□□□□ -0.93
NANOG-201ENST00000229307 SCAND2PQ9GZW5 306 aaPredicted RBP9.23□□□□□ -0.93
NANOG-201ENST00000229307 USP40Q9NVE5 1235 aa9.23□□□□□ -0.93
NANOG-201ENST00000229307 ZBED4O75132 1171 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 CHRNDQ07001 517 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 DEFB132Q7Z7B7 95 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 SAP30BPQ9UHR5 308 aaKnown RBP9.22□□□□□ -0.93
NANOG-201ENST00000229307 STRCP1A6NGW2 1772 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 NRXN3Q9Y4C0 1643 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 NAPAP54920 295 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 CCT2P78371 535 aaKnown RBP9.22□□□□□ -0.93
NANOG-201ENST00000229307 GRAPQ13588 217 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 ERFEQ4G0M1 354 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 GRAPLQ8TC17 118 aaPredicted RBP9.22□□□□□ -0.93
NANOG-201ENST00000229307 DBNDD2Q9BQY9 259 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 ZNHIT6Q9NWK9 470 aaKnown RBP9.22□□□□□ -0.93
NANOG-201ENST00000229307 RGS12O14924 1447 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 LRP6O75581 1613 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 COL15A1P39059 1388 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 PSDA5PKW4 1024 aaPredicted RBP9.22□□□□□ -0.93
NANOG-201ENST00000229307 FGFR1OPO95684 399 aaKnown RBP9.22□□□□□ -0.93
NANOG-201ENST00000229307 NAP1L1P55209 391 aaKnown RBP9.22□□□□□ -0.93
NANOG-201ENST00000229307 BEND3Q5T5X7 828 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 CCDC150Q8NCX0 1101 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 TANGO6Q9C0B7 1094 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 TAOK3Q9H2K8 898 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 TNMDQ9H2S6 317 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 PLEKHG2Q9H7P9 1386 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 PRC1O43663 620 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 GNA11P29992 359 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 SUPT20HL1Q3ZLR7 823 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 RC3H1Q5TC82 1133 aaKnown RBP9.22□□□□□ -0.93
NANOG-201ENST00000229307 HEATR3Q7Z4Q2 680 aa9.22□□□□□ -0.93
NANOG-201ENST00000229307 IRX3P78415 501 aaPredicted RBP9.21□□□□□ -0.93
NANOG-201ENST00000229307 NALCNQ8IZF0 1738 aa9.21□□□□□ -0.93
NANOG-201ENST00000229307 TNPO1Q92973 898 aaKnown RBP9.21□□□□□ -0.93
NANOG-201ENST00000229307 ARPP21Q9UBL0 812 aaPredicted RBP9.21□□□□□ -0.93
NANOG-201ENST00000229307 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.93
NANOG-201ENST00000229307 PRPF40AO75400 957 aaKnown RBP9.21□□□□□ -0.93
NANOG-201ENST00000229307 POTEJP0CG39 1038 aa9.21□□□□□ -0.93
NANOG-201ENST00000229307 NLRP10Q86W26 655 aa9.21□□□□□ -0.93
NANOG-201ENST00000229307 IBTKQ9P2D0 1353 aaPredicted RBP9.21□□□□□ -0.93
NANOG-201ENST00000229307 GRIN3BO60391 1043 aa9.21□□□□□ -0.94
NANOG-201ENST00000229307 SLC16A10Q8TF71 515 aa9.21□□□□□ -0.94
NANOG-201ENST00000229307 IGHDP01880 384 aa9.21□□□□□ -0.94
NANOG-201ENST00000229307 ZFYVE27Q5T4F4 411 aa9.21□□□□□ -0.94
NANOG-201ENST00000229307 CCDC144CPQ8IYA2 1237 aa9.21□□□□□ -0.94
NANOG-201ENST00000229307 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.21□□□□□ -0.94
NANOG-201ENST00000229307 AATFQ9NY61 560 aaKnown RBP eCLIP9.21□□□□□ -0.94
NANOG-201ENST00000229307 FMN2Q9NZ56 1722 aa9.21□□□□□ -0.94
NANOG-201ENST00000229307 CCDC192P0DO97 292 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 RBM25P49756 843 aaKnown RBP9.2□□□□□ -0.94
NANOG-201ENST00000229307 DOK7Q18PE1 504 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 GPR108Q9NPR9 543 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 KIAA1210Q9ULL0 1709 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 CIAPIN1Q6FI81 312 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 ARMC9Q7Z3E5 817 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 CKAP2LQ8IYA6 745 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 KBTBD3Q8NAB2 608 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 SRP68Q9UHB9 627 aaKnown RBP9.2□□□□□ -0.94
NANOG-201ENST00000229307 CBFA2T2O43439 604 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 IBSPP21815 317 aaPredicted RBP9.2□□□□□ -0.94
NANOG-201ENST00000229307 SMC5Q8IY18 1101 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 BRF1Q92994 677 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 TMEM87BQ96K49 555 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 ARMT1Q9H993 441 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 ABCC4O15439 1325 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 NCBP1Q09161 790 aaKnown RBP9.2□□□□□ -0.94
NANOG-201ENST00000229307 NAP1L5Q96NT1 182 aaPredicted RBP9.2□□□□□ -0.94
NANOG-201ENST00000229307 LZTS2Q9BRK4 669 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 MYO3BQ8WXR4 1341 aa9.2□□□□□ -0.94
NANOG-201ENST00000229307 ADGRB2O60241 1585 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 ZBTB7AO95365 584 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 ATP5JP18859 108 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 CCDC173Q0VFZ6 552 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 PDILTQ8N807 584 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 SMCR8Q8TEV9 937 aaPredicted RBP9.19□□□□□ -0.94
NANOG-201ENST00000229307 NHSL1Q5SYE7 1610 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 SPDYE4A6NLX3 237 aa9.19□□□□□ -0.94
NANOG-201ENST00000229307 PAF1Q8N7H5 531 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms