RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 ABCB6Q9NP58 842 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 FPGT-TNNI3KV9GXZ4 949 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 MAP3K5Q99683 1374 aa16.6■□□□□ 0.25
PRDM4-201ENST00000228437 ALDH1L1O75891 902 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 PDIA3P30101 505 aaKnown RBP16.59■□□□□ 0.25
PRDM4-201ENST00000228437 SF3A3Q12874 501 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRDM4-201ENST00000228437 PSMB7Q99436 277 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 DBNLQ9UJU6 430 aaKnown RBP16.59■□□□□ 0.25
PRDM4-201ENST00000228437 TXLNAP40222 546 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 ESCO1Q5FWF5 840 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 FBXO18Q8NFZ0 1043 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 ABCC3O15438 1527 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 A0A0G2JLW4 131 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 ERICH2A1L162 156 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 EIF5P55010 431 aaKnown RBP16.59■□□□□ 0.25
PRDM4-201ENST00000228437 LINC00301Q8NCQ3 95 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 ZNF594Q96JF6 807 aaPredicted RBP16.59■□□□□ 0.25
PRDM4-201ENST00000228437 CDC5LQ99459 802 aaKnown RBP16.59■□□□□ 0.25
PRDM4-201ENST00000228437 OSBPL5Q9H0X9 879 aaPredicted RBP16.59■□□□□ 0.25
PRDM4-201ENST00000228437 ENC1O14682 589 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 SASH3O75995 380 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 MRPS25P82663 173 aaKnown RBP16.59■□□□□ 0.25
PRDM4-201ENST00000228437 CCDC181Q5TID7 509 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 UHRF1BP1LA0JNW5 1464 aa16.59■□□□□ 0.25
PRDM4-201ENST00000228437 FLT4P35916 1363 aa16.58■□□□□ 0.25
PRDM4-201ENST00000228437 ZC3H6P61129 1189 aaKnown RBP16.58■□□□□ 0.25
PRDM4-201ENST00000228437 TRIM22Q8IYM9 498 aa16.58■□□□□ 0.25
PRDM4-201ENST00000228437 EBAG9O00559 213 aa16.58■□□□□ 0.24
PRDM4-201ENST00000228437 SSBP05455 408 aaKnown RBP eCLIP16.58■□□□□ 0.24
PRDM4-201ENST00000228437 SPECC1LQ69YQ0 1117 aa16.58■□□□□ 0.24
PRDM4-201ENST00000228437 AFAP1L1Q8TED9 768 aa16.58■□□□□ 0.24
PRDM4-201ENST00000228437 EEF2KMTQ96G04 330 aa16.58■□□□□ 0.24
PRDM4-201ENST00000228437 ZBTB3Q9H5J0 574 aa16.58■□□□□ 0.24
PRDM4-201ENST00000228437 PRR36Q9H6K5 1346 aa16.58■□□□□ 0.24
PRDM4-201ENST00000228437 TFRCP02786 760 aaKnown RBP16.58■□□□□ 0.24
PRDM4-201ENST00000228437 GIMAP7Q8NHV1 300 aa16.58■□□□□ 0.24
PRDM4-201ENST00000228437 RABGGTAQ92696 567 aa16.58■□□□□ 0.24
PRDM4-201ENST00000228437 CPSF1Q10570 1443 aaKnown RBP16.58■□□□□ 0.24
PRDM4-201ENST00000228437 PHLPP2Q6ZVD8 1323 aa16.58■□□□□ 0.24
PRDM4-201ENST00000228437 TBC1D8O95759 1140 aa16.57■□□□□ 0.24
PRDM4-201ENST00000228437 ENOX2Q16206 610 aaKnown RBP16.57■□□□□ 0.24
PRDM4-201ENST00000228437 FMR1NBQ8N0W7 255 aaPredicted RBP16.57■□□□□ 0.24
PRDM4-201ENST00000228437 LLPHQ9BRT6 129 aaKnown RBP16.57■□□□□ 0.24
PRDM4-201ENST00000228437 HOXC9P31274 260 aa16.57■□□□□ 0.24
PRDM4-201ENST00000228437 CMTR1Q8N1G2 835 aaKnown RBP16.57■□□□□ 0.24
PRDM4-201ENST00000228437 NCOA7Q8NI08 942 aa16.57■□□□□ 0.24
PRDM4-201ENST00000228437 POTEB2H3BUK9 544 aa16.57■□□□□ 0.24
PRDM4-201ENST00000228437 ANKRD13DQ6ZTN6 518 aa16.57■□□□□ 0.24
PRDM4-201ENST00000228437 SLC35F6Q8N357 371 aa16.57■□□□□ 0.24
PRDM4-201ENST00000228437 ZKSCAN3Q9BRR0 538 aa16.57■□□□□ 0.24
PRDM4-201ENST00000228437 SAMSN1Q9NSI8 373 aaKnown RBP16.57■□□□□ 0.24
PRDM4-201ENST00000228437 COL3A1P02461 1466 aaPredicted RBP16.57■□□□□ 0.24
PRDM4-201ENST00000228437 IFIT3O14879 490 aaKnown RBP16.56■□□□□ 0.24
PRDM4-201ENST00000228437 CCT5P48643 541 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 CDKL5O76039 1030 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 VPS37DQ86XT2 251 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.56■□□□□ 0.24
PRDM4-201ENST00000228437 ADCY9O60503 1353 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 EIF3CLB5ME19 914 aaKnown RBP16.56■□□□□ 0.24
PRDM4-201ENST00000228437 FOXR1Q6PIV2 292 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 SRLQ86TD4 932 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 ACRBPQ8NEB7 543 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 EXOC4Q96A65 974 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 EIF3CQ99613 913 aaKnown RBP16.56■□□□□ 0.24
PRDM4-201ENST00000228437 POLD4Q9HCU8 107 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 KCNJ14Q9UNX9 436 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 AMOTL2Q9Y2J4 779 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 FOXN1O15353 648 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 MAP9Q49MG5 647 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 TMEM67Q5HYA8 995 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 ICE2Q659A1 982 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 SMYD4Q8IYR2 804 aaPredicted RBP16.56■□□□□ 0.24
PRDM4-201ENST00000228437 PPM1EQ8WY54 764 aa16.56■□□□□ 0.24
PRDM4-201ENST00000228437 ADGRB2O60241 1585 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 SERTAD1Q9UHV2 236 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 CCDC57Q2TAC2 916 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 KRT40Q6A162 431 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 STOX1Q6ZVD7 989 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 L2HGDHQ9H9P8 463 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 ZFYVE16Q7Z3T8 1539 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 GLI2P10070 1586 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 CDR1P51861 262 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 NCAPH2Q6IBW4 605 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 SAMM50Q9Y512 469 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 SLC12A7Q9Y666 1083 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 PARP3Q9Y6F1 533 aa16.55■□□□□ 0.24
PRDM4-201ENST00000228437 CARMIL3Q8ND23 1372 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 BRD3Q15059 726 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 CEP57Q86XR8 500 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 ZNHIT6Q9NWK9 470 aaKnown RBP16.54■□□□□ 0.24
PRDM4-201ENST00000228437 RTEL1Q9NZ71 1219 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 TET3O43151 1660 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 hCG_1642624A0A1W2PR95 340 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 H3BQF6 201 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 SRGAP1Q7Z6B7 1085 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 NAPGQ99747 312 aaPredicted RBP16.54■□□□□ 0.24
PRDM4-201ENST00000228437 MACROD2A1Z1Q3 448 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 USP8P40818 1118 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 RRAGBQ5VZM2 374 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms