RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 CARMIL3Q8ND23 1372 aa22.53■■□□□ 1.2
YBX3-201ENST00000228251 MAGEB6Q8N7X4 407 aa22.53■■□□□ 1.2
YBX3-201ENST00000228251 BSDC1Q9NW68 430 aaPredicted RBP22.53■■□□□ 1.2
YBX3-201ENST00000228251 USP21Q9UK80 565 aa22.53■■□□□ 1.2
YBX3-201ENST00000228251 DENND2AQ9ULE3 1009 aa22.53■■□□□ 1.2
YBX3-201ENST00000228251 PNPLA7Q6ZV29 1317 aa22.52■■□□□ 1.2
YBX3-201ENST00000228251 KIF3AQ9Y496 699 aa22.52■■□□□ 1.2
YBX3-201ENST00000228251 MYH13Q9UKX3 1938 aa22.51■■□□□ 1.19
YBX3-201ENST00000228251 PATL2C9JE40 543 aaKnown RBP22.51■■□□□ 1.19
YBX3-201ENST00000228251 SMIM5Q71RC9 77 aa22.51■■□□□ 1.19
YBX3-201ENST00000228251 RALYLQ86SE5 291 aaKnown RBP22.51■■□□□ 1.19
YBX3-201ENST00000228251 AIDAQ96BJ3 306 aa22.51■■□□□ 1.19
YBX3-201ENST00000228251 H3BQV1 296 aa22.5■■□□□ 1.19
YBX3-201ENST00000228251 UBE4AQ14139 1066 aa22.5■■□□□ 1.19
YBX3-201ENST00000228251 IFFO2Q5TF58 517 aa22.5■■□□□ 1.19
YBX3-201ENST00000228251 CYB5R4Q7L1T6 521 aa22.5■■□□□ 1.19
YBX3-201ENST00000228251 ANKRD18AQ8IVF6 992 aa22.5■■□□□ 1.19
YBX3-201ENST00000228251 ANP32BQ92688 251 aaKnown RBP22.5■■□□□ 1.19
YBX3-201ENST00000228251 TFIP11Q9UBB9 837 aaKnown RBP22.5■■□□□ 1.19
YBX3-201ENST00000228251 TNRC6CQ9HCJ0 1690 aaKnown RBP22.5■■□□□ 1.19
YBX3-201ENST00000228251 KLF18A0A0U1RQI7 1052 aa22.5■■□□□ 1.19
YBX3-201ENST00000228251 MBD4O95243 580 aa22.5■■□□□ 1.19
YBX3-201ENST00000228251 PGBD1Q96JS3 809 aa22.5■■□□□ 1.19
YBX3-201ENST00000228251 SPATA32Q96LK8 384 aa22.5■■□□□ 1.19
YBX3-201ENST00000228251 GSG1L2A8MUP6 293 aa22.49■■□□□ 1.19
YBX3-201ENST00000228251 SH2B2O14492 632 aaPredicted RBP22.49■■□□□ 1.19
YBX3-201ENST00000228251 LIG1P18858 919 aa22.49■■□□□ 1.19
YBX3-201ENST00000228251 AMIGO3Q86WK7 504 aa22.49■■□□□ 1.19
YBX3-201ENST00000228251 IFNL3Q8IZI9 196 aa22.49■■□□□ 1.19
YBX3-201ENST00000228251 SRP68Q9UHB9 627 aaKnown RBP22.49■■□□□ 1.19
YBX3-201ENST00000228251 MINPP1Q9UNW1 487 aa22.49■■□□□ 1.19
YBX3-201ENST00000228251 TACC3Q9Y6A5 838 aa22.49■■□□□ 1.19
YBX3-201ENST00000228251 NEDD4P46934 1319 aa22.48■■□□□ 1.19
YBX3-201ENST00000228251 ILDR1Q86SU0 546 aaPredicted RBP22.48■■□□□ 1.19
YBX3-201ENST00000228251 ESPNB1AK53 854 aa22.48■■□□□ 1.19
YBX3-201ENST00000228251 RNF214Q8ND24 703 aa22.48■■□□□ 1.19
YBX3-201ENST00000228251 RGS22Q8NE09 1264 aa22.48■■□□□ 1.19
YBX3-201ENST00000228251 CELF1Q92879 486 aaKnown RBP22.48■■□□□ 1.19
YBX3-201ENST00000228251 NYXQ9GZU5 481 aa22.48■■□□□ 1.19
YBX3-201ENST00000228251 ARMT1Q9H993 441 aa22.48■■□□□ 1.19
YBX3-201ENST00000228251 ANGEL1Q9UNK9 670 aaKnown RBP22.48■■□□□ 1.19
YBX3-201ENST00000228251 WTIPA6NIX2 430 aaPredicted RBP22.47■■□□□ 1.19
YBX3-201ENST00000228251 GOLGA8BA8MQT2 603 aa22.47■■□□□ 1.19
YBX3-201ENST00000228251 CLCN1P35523 988 aa22.47■■□□□ 1.19
YBX3-201ENST00000228251 UVSSAQ2YD98 709 aa22.47■■□□□ 1.19
YBX3-201ENST00000228251 HS1BP3Q53T59 392 aa22.47■■□□□ 1.19
YBX3-201ENST00000228251 ONECUT3O60422 494 aaPredicted RBP22.46■■□□□ 1.19
YBX3-201ENST00000228251 TRDNQ13061 729 aa22.46■■□□□ 1.19
YBX3-201ENST00000228251 ATL3Q6DD88 541 aa22.46■■□□□ 1.19
YBX3-201ENST00000228251 RBM43Q6ZSC3 357 aaKnown RBP22.46■■□□□ 1.19
YBX3-201ENST00000228251 LCORLQ8N3X6 602 aa22.46■■□□□ 1.19
YBX3-201ENST00000228251 IGDCC4Q8TDY8 1250 aa22.46■■□□□ 1.19
YBX3-201ENST00000228251 TRIM44Q96DX7 344 aaPredicted RBP22.46■■□□□ 1.19
YBX3-201ENST00000228251 RCOR1Q9UKL0 485 aa22.46■■□□□ 1.19
YBX3-201ENST00000228251 GNPATO15228 680 aa22.45■■□□□ 1.19
YBX3-201ENST00000228251 APPP05067 770 aa22.45■■□□□ 1.19
YBX3-201ENST00000228251 GNAT2P19087 354 aa22.45■■□□□ 1.19
YBX3-201ENST00000228251 GIMAP6Q6P9H5 292 aa22.45■■□□□ 1.19
YBX3-201ENST00000228251 TMEM87BQ96K49 555 aa22.45■■□□□ 1.19
YBX3-201ENST00000228251 CCNL1Q9UK58 526 aaPredicted RBP22.45■■□□□ 1.19
YBX3-201ENST00000228251 CFAP45Q9UL16 551 aa22.45■■□□□ 1.19
YBX3-201ENST00000228251 MAST2Q6P0Q8 1798 aa22.45■■□□□ 1.18
YBX3-201ENST00000228251 KIAA1551Q9HCM1 1747 aa22.45■■□□□ 1.18
YBX3-201ENST00000228251 ZBTB22O15209 634 aa22.45■■□□□ 1.18
YBX3-201ENST00000228251 DHX16O60231 1041 aaKnown RBP22.45■■□□□ 1.18
YBX3-201ENST00000228251 BICDL1Q6ZP65 573 aa22.45■■□□□ 1.18
YBX3-201ENST00000228251 SGMS1Q86VZ5 419 aa22.45■■□□□ 1.18
YBX3-201ENST00000228251 NAP1L2Q9ULW6 460 aaPredicted RBP22.45■■□□□ 1.18
YBX3-201ENST00000228251 UBR3Q6ZT12 1888 aa22.44■■□□□ 1.18
YBX3-201ENST00000228251 B4E1Z4 1266 aa22.44■■□□□ 1.18
YBX3-201ENST00000228251 GYG1P46976 350 aa22.44■■□□□ 1.18
YBX3-201ENST00000228251 FAM84BQ96KN1 310 aaPredicted RBP22.44■■□□□ 1.18
YBX3-201ENST00000228251 GJD4Q96KN9 370 aaPredicted RBP22.44■■□□□ 1.18
YBX3-201ENST00000228251 SETDB2Q96T68 719 aa22.44■■□□□ 1.18
YBX3-201ENST00000228251 NID2Q14112 1375 aa22.44■■□□□ 1.18
YBX3-201ENST00000228251 PRKAB2O43741 272 aa22.43■■□□□ 1.18
YBX3-201ENST00000228251 FAM182BQ5T319 152 aa22.43■■□□□ 1.18
YBX3-201ENST00000228251 FBXO33Q7Z6M2 555 aa22.43■■□□□ 1.18
YBX3-201ENST00000228251 ADGRA1Q86SQ6 560 aa22.43■■□□□ 1.18
YBX3-201ENST00000228251 ARHGEF1Q92888 912 aaKnown RBP22.43■■□□□ 1.18
YBX3-201ENST00000228251 NAPBQ9H115 298 aa22.43■■□□□ 1.18
YBX3-201ENST00000228251 LY9Q9HBG7 655 aa22.43■■□□□ 1.18
YBX3-201ENST00000228251 SENP2Q9HC62 589 aa22.43■■□□□ 1.18
YBX3-201ENST00000228251 PDS5AQ29RF7 1337 aaKnown RBP22.43■■□□□ 1.18
YBX3-201ENST00000228251 TM4SF1P30408 202 aa22.43■■□□□ 1.18
YBX3-201ENST00000228251 APOA5Q6Q788 366 aa22.43■■□□□ 1.18
YBX3-201ENST00000228251 DDX19AQ9NUU7 478 aaKnown RBP22.43■■□□□ 1.18
YBX3-201ENST00000228251 RTCBQ9Y3I0 505 aaKnown RBP22.43■■□□□ 1.18
YBX3-201ENST00000228251 TPRNQ4KMQ1 711 aa22.42■■□□□ 1.18
YBX3-201ENST00000228251 AKNAD1Q5T1N1 836 aa22.42■■□□□ 1.18
YBX3-201ENST00000228251 FBXO18Q8NFZ0 1043 aa22.42■■□□□ 1.18
YBX3-201ENST00000228251 STAG1Q8WVM7 1258 aa22.42■■□□□ 1.18
YBX3-201ENST00000228251 USP28Q96RU2 1077 aa22.42■■□□□ 1.18
YBX3-201ENST00000228251 INCENPQ9NQS7 918 aa22.42■■□□□ 1.18
YBX3-201ENST00000228251 GNL3LQ9NVN8 582 aaKnown RBP22.42■■□□□ 1.18
YBX3-201ENST00000228251 IRS2Q9Y4H2 1338 aa22.42■■□□□ 1.18
YBX3-201ENST00000228251 PPFIA3O75145 1194 aa22.41■■□□□ 1.18
YBX3-201ENST00000228251 LIFRP42702 1097 aa22.41■■□□□ 1.18
YBX3-201ENST00000228251 RPS8P62241 208 aaKnown RBP22.41■■□□□ 1.18
YBX3-201ENST00000228251 NUP62CLQ9H1M0 184 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms