RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 FSIP1Q8NA03 581 aa25.65■■□□□ 1.7
SMARCD2-201ENST00000225742 MRPS27Q92552 414 aaKnown RBP25.65■■□□□ 1.7
SMARCD2-201ENST00000225742 CDKL5O76039 1030 aa25.64■■□□□ 1.7
SMARCD2-201ENST00000225742 PDE6AP16499 860 aa25.64■■□□□ 1.7
SMARCD2-201ENST00000225742 TMEM87BQ96K49 555 aa25.64■■□□□ 1.7
SMARCD2-201ENST00000225742 KCNF1Q9H3M0 494 aa25.64■■□□□ 1.7
SMARCD2-201ENST00000225742 DNAJC5Q9H3Z4 198 aa25.64■■□□□ 1.7
SMARCD2-201ENST00000225742 ANO10Q9NW15 660 aa25.64■■□□□ 1.7
SMARCD2-201ENST00000225742 ANGEL1Q9UNK9 670 aaKnown RBP25.64■■□□□ 1.7
SMARCD2-201ENST00000225742 SLC5A1P13866 664 aa25.63■■□□□ 1.69
SMARCD2-201ENST00000225742 GUCY1B3Q02153 619 aa25.63■■□□□ 1.69
SMARCD2-201ENST00000225742 TRIM5Q9C035 493 aa25.63■■□□□ 1.69
SMARCD2-201ENST00000225742 UBN2Q6ZU65 1347 aa25.63■■□□□ 1.69
SMARCD2-201ENST00000225742 ZNF532Q9HCE3 1301 aa25.63■■□□□ 1.69
SMARCD2-201ENST00000225742 GOLGA6L19H0YKK7 550 aa25.63■■□□□ 1.69
SMARCD2-201ENST00000225742 IQCB1Q15051 598 aa25.63■■□□□ 1.69
SMARCD2-201ENST00000225742 SPC24Q8NBT2 197 aa25.63■■□□□ 1.69
SMARCD2-201ENST00000225742 LINC00301Q8NCQ3 95 aa25.63■■□□□ 1.69
SMARCD2-201ENST00000225742 MAP7D2Q96T17 732 aa25.63■■□□□ 1.69
SMARCD2-201ENST00000225742 FTOQ9C0B1 505 aaKnown RBP eCLIP25.63■■□□□ 1.69
SMARCD2-201ENST00000225742 PCDHA7Q9UN72 937 aa25.63■■□□□ 1.69
SMARCD2-201ENST00000225742 DOCK2Q92608 1830 aa25.62■■□□□ 1.69
SMARCD2-201ENST00000225742 TCRBV5S4A2TA0A5A2 114 aa25.62■■□□□ 1.69
SMARCD2-201ENST00000225742 PHKA1P46020 1223 aa25.62■■□□□ 1.69
SMARCD2-201ENST00000225742 NBPF3Q9H094 633 aa25.62■■□□□ 1.69
SMARCD2-201ENST00000225742 COL16A1Q07092 1604 aaPredicted RBP25.62■■□□□ 1.69
SMARCD2-201ENST00000225742 DOT1LQ8TEK3 1739 aa25.61■■□□□ 1.69
SMARCD2-201ENST00000225742 SH2B2O14492 632 aaPredicted RBP25.61■■□□□ 1.69
SMARCD2-201ENST00000225742 IDH1O75874 414 aaKnown RBP25.61■■□□□ 1.69
SMARCD2-201ENST00000225742 EIF5P55010 431 aaKnown RBP25.61■■□□□ 1.69
SMARCD2-201ENST00000225742 STK38Q15208 465 aa25.61■■□□□ 1.69
SMARCD2-201ENST00000225742 CPLX2Q6PUV4 134 aaKnown RBP25.61■■□□□ 1.69
SMARCD2-201ENST00000225742 MYRIPQ8NFW9 859 aa25.61■■□□□ 1.69
SMARCD2-201ENST00000225742 RREB1Q92766 1687 aa25.61■■□□□ 1.69
SMARCD2-201ENST00000225742 FMR1NBQ8N0W7 255 aaPredicted RBP25.6■■□□□ 1.69
SMARCD2-201ENST00000225742 STRBPQ96SI9 672 aaKnown RBP25.6■■□□□ 1.69
SMARCD2-201ENST00000225742 RTL9Q8NET4 1388 aa25.6■■□□□ 1.69
SMARCD2-201ENST00000225742 CICQ96RK0 1608 aaPredicted RBP25.6■■□□□ 1.69
SMARCD2-201ENST00000225742 PARP10Q53GL7 1025 aa25.6■■□□□ 1.69
SMARCD2-201ENST00000225742 MYSM1Q5VVJ2 828 aa25.6■■□□□ 1.69
SMARCD2-201ENST00000225742 PDCL3Q9H2J4 239 aa25.6■■□□□ 1.69
SMARCD2-201ENST00000225742 AHDC1Q5TGY3 1603 aaPredicted RBP25.59■■□□□ 1.69
SMARCD2-201ENST00000225742 MYO5AQ9Y4I1 1855 aaKnown RBP25.59■■□□□ 1.69
SMARCD2-201ENST00000225742 SF3A1Q15459 793 aaKnown RBP25.59■■□□□ 1.69
SMARCD2-201ENST00000225742 SYNE3Q6ZMZ3 975 aa25.59■■□□□ 1.69
SMARCD2-201ENST00000225742 TBC1D10CQ8IV04 446 aa25.59■■□□□ 1.69
SMARCD2-201ENST00000225742 DRC7Q8IY82 874 aa25.59■■□□□ 1.69
SMARCD2-201ENST00000225742 SPATA5Q8NB90 893 aa25.59■■□□□ 1.69
SMARCD2-201ENST00000225742 NAT10Q9H0A0 1025 aaKnown RBP25.59■■□□□ 1.69
SMARCD2-201ENST00000225742 PATL2C9JE40 543 aaKnown RBP25.58■■□□□ 1.69
SMARCD2-201ENST00000225742 APPP05067 770 aa25.58■■□□□ 1.69
SMARCD2-201ENST00000225742 MAP3K12Q12852 859 aa25.58■■□□□ 1.69
SMARCD2-201ENST00000225742 MTERF4Q7Z6M4 381 aaKnown RBP25.58■■□□□ 1.69
SMARCD2-201ENST00000225742 AIDAQ96BJ3 306 aa25.58■■□□□ 1.69
SMARCD2-201ENST00000225742 MRFAP1L1Q96HT8 127 aa25.58■■□□□ 1.69
SMARCD2-201ENST00000225742 CCDC87Q9NVE4 849 aa25.58■■□□□ 1.69
SMARCD2-201ENST00000225742 PYCARDQ9ULZ3 195 aa25.58■■□□□ 1.69
SMARCD2-201ENST00000225742 SPTLC2O15270 562 aa25.58■■□□□ 1.68
SMARCD2-201ENST00000225742 PTGS1P23219 599 aa25.58■■□□□ 1.68
SMARCD2-201ENST00000225742 METAP2P50579 478 aaKnown RBP eCLIP25.58■■□□□ 1.68
SMARCD2-201ENST00000225742 KIF23Q02241 960 aaPredicted RBP25.58■■□□□ 1.68
SMARCD2-201ENST00000225742 SYTL4Q96C24 671 aaPredicted RBP25.58■■□□□ 1.68
SMARCD2-201ENST00000225742 UTP14AQ9BVJ6 771 aaKnown RBP25.58■■□□□ 1.68
SMARCD2-201ENST00000225742 SGMS1Q86VZ5 419 aa25.57■■□□□ 1.68
SMARCD2-201ENST00000225742 CEP57L1Q8IYX8 460 aa25.57■■□□□ 1.68
SMARCD2-201ENST00000225742 WWC3Q9ULE0 1092 aa25.57■■□□□ 1.68
SMARCD2-201ENST00000225742 THRAP3Q9Y2W1 955 aaKnown RBP25.57■■□□□ 1.68
SMARCD2-201ENST00000225742 LAMB2P55268 1798 aa25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 C11orf57Q6ZUT1 292 aaPredicted RBP25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 CYB5R4Q7L1T6 521 aa25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 CCDC186Q7Z3E2 898 aa25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 CNNM2Q9H8M5 875 aa25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 TIAM2Q8IVF5 1701 aa25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 GNAT2P19087 354 aa25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 GTF2F1P35269 517 aaKnown RBP eCLIP25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 SUSD4Q5VX71 490 aa25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 ANO1Q5XXA6 986 aa25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 INTS5Q6P9B9 1019 aaKnown RBP25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 MPHOSPH8Q99549 860 aa25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 CLIC4Q9Y696 253 aa25.56■■□□□ 1.68
SMARCD2-201ENST00000225742 SLIT2O94813 1529 aa25.55■■□□□ 1.68
SMARCD2-201ENST00000225742 NEMFO60524 1076 aa25.55■■□□□ 1.68
SMARCD2-201ENST00000225742 LIFRP42702 1097 aa25.55■■□□□ 1.68
SMARCD2-201ENST00000225742 OTUD7BQ6GQQ9 843 aa25.55■■□□□ 1.68
SMARCD2-201ENST00000225742 KDM4FA0A1W2PPD8 638 aa25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 BECN2A8MW95 431 aa25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 PPFIA3O75145 1194 aa25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 CCDC152Q4G0S7 254 aa25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 APOA5Q6Q788 366 aa25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 C17orf53Q8N3J3 647 aaPredicted RBP25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 IGDCC4Q8TDY8 1250 aa25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 BPIFA3Q9BQP9 254 aa25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 SDF4Q9BRK5 362 aa25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 MTA3Q9BTC8 594 aa25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 CLIP2Q9UDT6 1046 aa25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 PHLPP1O60346 1717 aa25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 CHD4Q14839 1912 aa25.54■■□□□ 1.68
SMARCD2-201ENST00000225742 CMA1P23946 247 aa25.53■■□□□ 1.68
SMARCD2-201ENST00000225742 IFNL3Q8IZI9 196 aa25.53■■□□□ 1.68
SMARCD2-201ENST00000225742 ALG1Q9BT22 464 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms