RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 MAST3O60307 1309 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 PHKG2P15735 406 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 GTF2IP78347 998 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 CTDSPL2Q05D32 466 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 ZSCAN30Q86W11 494 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 SUPT20HQ8NEM7 779 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 UIMC1Q96RL1 719 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 BABAM1Q9NWV8 329 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 ALDH1B1P30837 517 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 UBASH3AP57075 661 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 HOMER2Q9NSB8 354 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 HARSP12081 509 aaKnown RBP20.96■□□□□ 0.95
CLIP2-201ENST00000223398 HLTFQ14527 1009 aaKnown RBP eCLIP20.96■□□□□ 0.95
CLIP2-201ENST00000223398 ANO6Q4KMQ2 910 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 TGFBRAP1Q8WUH2 860 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 IMPG2Q9BZV3 1241 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 ARHGEF12Q9NZN5 1544 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 PNMA6EA0A0J9YXQ4 647 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 KIAA0754O94854 1291 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 STX17P56962 302 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 SPATA5Q8NB90 893 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 DTHD1Q6ZMT9 781 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 FAM227BQ96M60 508 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 RBM28Q9NW13 759 aaKnown RBP20.96■□□□□ 0.95
CLIP2-201ENST00000223398 BCCIPQ9P287 314 aaKnown RBP eCLIP20.96■□□□□ 0.95
CLIP2-201ENST00000223398 ZAP70P43403 619 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 DLGAP5Q15398 846 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 JADE2Q9NQC1 790 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 TRIM37O94972 964 aa20.96■□□□□ 0.95
CLIP2-201ENST00000223398 MYCLP12524 364 aaPredicted RBP20.96■□□□□ 0.95
CLIP2-201ENST00000223398 KIF2AO00139 706 aaPredicted RBP20.95■□□□□ 0.94
CLIP2-201ENST00000223398 GJC1P36383 396 aa20.95■□□□□ 0.94
CLIP2-201ENST00000223398 NOD1Q9Y239 953 aa20.95■□□□□ 0.94
CLIP2-201ENST00000223398 GINS2Q9Y248 185 aa20.95■□□□□ 0.94
CLIP2-201ENST00000223398 IVNS1ABPQ9Y6Y0 642 aa20.95■□□□□ 0.94
CLIP2-201ENST00000223398 RPS8P62241 208 aaKnown RBP20.95■□□□□ 0.94
CLIP2-201ENST00000223398 PTGS1P23219 599 aa20.95■□□□□ 0.94
CLIP2-201ENST00000223398 TTLL7Q6ZT98 887 aa20.95■□□□□ 0.94
CLIP2-201ENST00000223398 GSDMDP57764 484 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 ARHGAP27Q6ZUM4 889 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 RTL1A6NKG5 1358 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 APPBP2Q92624 585 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 RAD50Q92878 1312 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 NEO1Q92859 1461 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 VWA3AA6NCI4 1184 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 PDE6BP35913 854 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 C2CD5Q86YS7 1000 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 ABCA5Q8WWZ7 1642 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 KCNQ4P56696 695 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 TCIRG1Q13488 830 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 ZSCAN23Q3MJ62 389 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 AOPEPQ8N6M6 819 aa20.94■□□□□ 0.94
CLIP2-201ENST00000223398 DOK7Q18PE1 504 aa20.93■□□□□ 0.94
CLIP2-201ENST00000223398 USH1GQ495M9 461 aa20.93■□□□□ 0.94
CLIP2-201ENST00000223398 MYL10Q9BUA6 226 aa20.93■□□□□ 0.94
CLIP2-201ENST00000223398 ZSWIM4Q9H7M6 989 aa20.93■□□□□ 0.94
CLIP2-201ENST00000223398 V9GY48 417 aaPredicted RBP20.93■□□□□ 0.94
CLIP2-201ENST00000223398 CCDC172P0C7W6 258 aa20.93■□□□□ 0.94
CLIP2-201ENST00000223398 TMCO3Q6UWJ1 677 aa20.93■□□□□ 0.94
CLIP2-201ENST00000223398 DNAJC25Q9H1X3 360 aa20.93■□□□□ 0.94
CLIP2-201ENST00000223398 LMAN1P49257 510 aa20.93■□□□□ 0.94
CLIP2-201ENST00000223398 TRPC5Q9UL62 973 aaPredicted RBP20.93■□□□□ 0.94
CLIP2-201ENST00000223398 MROH5Q6ZUA9 1318 aa20.92■□□□□ 0.94
CLIP2-201ENST00000223398 BEGAINQ9BUH8 593 aa20.92■□□□□ 0.94
CLIP2-201ENST00000223398 ZNF532Q9HCE3 1301 aa20.92■□□□□ 0.94
CLIP2-201ENST00000223398 DDX39AO00148 427 aaKnown RBP20.92■□□□□ 0.94
CLIP2-201ENST00000223398 SLC1A4P43007 532 aa20.92■□□□□ 0.94
CLIP2-201ENST00000223398 USPL1Q5W0Q7 1092 aa20.92■□□□□ 0.94
CLIP2-201ENST00000223398 TTF2Q9UNY4 1162 aaKnown RBP20.92■□□□□ 0.94
CLIP2-201ENST00000223398 HS2ST1Q7LGA3 356 aa20.92■□□□□ 0.94
CLIP2-201ENST00000223398 SMC5Q8IY18 1101 aa20.92■□□□□ 0.94
CLIP2-201ENST00000223398 NCOA5Q9HCD5 579 aaKnown RBP20.92■□□□□ 0.94
CLIP2-201ENST00000223398 H7C1D1 291 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 MFSD14BQ5SR56 506 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 NSMFQ6X4W1 530 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 IL17REQ8NFR9 667 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 NEURL1BA8MQ27 555 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 CTSWP56202 376 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 PIK3AP1Q6ZUJ8 805 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 GBP3Q9H0R5 595 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 DTNBO60941 627 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 ACTN2P35609 894 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 PLCD4Q9BRC7 762 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 USP40Q9NVE5 1235 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 KIAA0232Q92628 1395 aa20.91■□□□□ 0.94
CLIP2-201ENST00000223398 SLC27A2O14975 620 aa20.9■□□□□ 0.94
CLIP2-201ENST00000223398 SPECC1Q5M775 1068 aa20.9■□□□□ 0.94
CLIP2-201ENST00000223398 SCNN1DP51172 638 aa20.9■□□□□ 0.94
CLIP2-201ENST00000223398 GPHNQ9NQX3 736 aaPredicted RBP20.9■□□□□ 0.94
CLIP2-201ENST00000223398 TMEM110-MUSTN1A8MSY1 372 aa20.9■□□□□ 0.94
CLIP2-201ENST00000223398 GYG1P46976 350 aa20.9■□□□□ 0.94
CLIP2-201ENST00000223398 GIGYF1O75420 1035 aaPredicted RBP20.89■□□□□ 0.93
CLIP2-201ENST00000223398 KLHL40Q2TBA0 621 aa20.89■□□□□ 0.93
CLIP2-201ENST00000223398 FAM47AQ5JRC9 791 aa20.89■□□□□ 0.93
CLIP2-201ENST00000223398 TAF12Q16514 161 aa20.89■□□□□ 0.93
CLIP2-201ENST00000223398 CCDC91Q7Z6B0 441 aa20.89■□□□□ 0.93
CLIP2-201ENST00000223398 METP08581 1390 aa20.89■□□□□ 0.93
CLIP2-201ENST00000223398 CCNT1O60563 726 aaKnown RBP20.89■□□□□ 0.93
CLIP2-201ENST00000223398 GNG11P61952 73 aa20.89■□□□□ 0.93
CLIP2-201ENST00000223398 ASAP1Q9ULH1 1129 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms