RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 ATP2B3Q16720 1220 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 SDCCAG8Q86SQ7 713 aaPredicted RBP12.4□□□□□ -0.42
USP31-201ENST00000219689 RAB34Q9BZG1 259 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 EIF3CLB5ME19 914 aaKnown RBP12.4□□□□□ -0.42
USP31-201ENST00000219689 EVA1CP58658 441 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 EIF3CQ99613 913 aaKnown RBP12.4□□□□□ -0.42
USP31-201ENST00000219689 ESYT1Q9BSJ8 1104 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 ELP1O95163 1332 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 IDH1O75874 414 aaKnown RBP12.4□□□□□ -0.42
USP31-201ENST00000219689 Q6ZUG5 572 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 TRIM6Q9C030 488 aaPredicted RBP12.4□□□□□ -0.42
USP31-201ENST00000219689 ANKRD65E5RJM6 399 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 SPECC1L-ADORA2AF8WAN1 911 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 POLD1P28340 1107 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 TMEM266Q2M3C6 531 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 ARMC2Q8NEN0 867 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 SCOCQ9UIL1 159 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 MINDY4BA8MYZ0 360 aa12.4□□□□□ -0.43
USP31-201ENST00000219689 SULT6B1Q6IMI4 303 aa12.4□□□□□ -0.43
USP31-201ENST00000219689 KSR1Q8IVT5 923 aa12.4□□□□□ -0.43
USP31-201ENST00000219689 CENPKQ9BS16 269 aa12.4□□□□□ -0.43
USP31-201ENST00000219689 GAS2L3Q86XJ1 694 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 A0A1B0GVL5 298 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 METAP2P50579 478 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP31-201ENST00000219689 GYS2P54840 703 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 AIDAQ96BJ3 306 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 DHX58Q96C10 678 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 DNAI2Q9GZS0 605 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 STRN4Q9NRL3 753 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 PRPHP41219 470 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 HAND2P61296 217 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 AMPD3Q01432 767 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 PEG3Q9GZU2 1588 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 SPDL1Q96EA4 605 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 FERMT1Q9BQL6 677 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 MRPL46Q9H2W6 279 aaKnown RBP12.39□□□□□ -0.43
USP31-201ENST00000219689 TADA2BQ86TJ2 420 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 CCDC141Q6ZP82 1450 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 SPTLC2O15270 562 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 PAK2Q13177 524 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 KRT71Q3SY84 523 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 EFCAB2Q5VUJ9 269 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 TMEM132EQ6IEE7 984 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 IFIT3O14879 490 aaKnown RBP12.39□□□□□ -0.43
USP31-201ENST00000219689 PDHA1P08559 390 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 GPT2Q8TD30 523 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 CCDC8Q9H0W5 538 aaPredicted RBP12.39□□□□□ -0.43
USP31-201ENST00000219689 AKAP2Q9Y2D5 859 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 NCOA2Q15596 1464 aa12.39□□□□□ -0.43
USP31-201ENST00000219689 EVI5LQ96CN4 794 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 HAUS1Q96CS2 278 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 ATAD2Q6PL18 1390 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 TTF2Q9UNY4 1162 aaKnown RBP12.38□□□□□ -0.43
USP31-201ENST00000219689 ARAP1Q96P48 1450 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 PHLDB3Q6NSJ2 640 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 KLHL7Q8IXQ5 586 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 PYM1Q9BRP8 204 aaKnown RBP12.38□□□□□ -0.43
USP31-201ENST00000219689 EEF2P13639 858 aaKnown RBP12.38□□□□□ -0.43
USP31-201ENST00000219689 LRRC8AQ8IWT6 810 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 ERBB4Q15303 1308 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 HINFPQ9BQA5 517 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 ATRXP46100 2492 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 MX2P20592 715 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 AK2P54819 239 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 TMEM67Q5HYA8 995 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 NUB1Q9Y5A7 615 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 RAD54L2Q9Y4B4 1467 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 KCTD16Q68DU8 428 aa12.38□□□□□ -0.43
USP31-201ENST00000219689 GUCY2CP25092 1073 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 ECM2O94769 699 aaPredicted RBP12.37□□□□□ -0.43
USP31-201ENST00000219689 UBA7P41226 1012 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 ATG3Q9NT62 314 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 F6X3S4 739 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 ZNF213O14771 459 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 TCP11L1Q9NUJ3 509 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 RNF40O75150 1001 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 GMNNO75496 209 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 DESI2Q9BSY9 194 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 CCDC88CQ9P219 2028 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 MYL5Q02045 173 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 SYCP3Q8IZU3 236 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 HMG20BQ9P0W2 317 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 IRX1P78414 480 aaPredicted RBP12.37□□□□□ -0.43
USP31-201ENST00000219689 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
USP31-201ENST00000219689 ANKRD42Q8N9B4 389 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 SPAG5Q96R06 1193 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 USP26Q9BXU7 913 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 THEGQ9P2T0 379 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 GNPTABQ3T906 1256 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 ALG1Q9BT22 464 aa12.37□□□□□ -0.43
USP31-201ENST00000219689 CFTRP13569 1480 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 ARHGAP42A6NI28 874 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 SPAG1Q07617 926 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
USP31-201ENST00000219689 EXOC4Q96A65 974 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 MYH13Q9UKX3 1938 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 PPFIA4O75335 1185 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms