RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 TRIM28Q13263 835 aaKnown RBP10.92□□□□□ -0.66
CCDC113-201ENST00000219299 RC3H1Q5TC82 1133 aaKnown RBP10.92□□□□□ -0.66
CCDC113-201ENST00000219299 TTC6Q86TZ1 520 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 SASH1O94885 1247 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 IARSP41252 1262 aaKnown RBP10.92□□□□□ -0.66
CCDC113-201ENST00000219299 EZH2Q15910 746 aaKnown RBP10.92□□□□□ -0.66
CCDC113-201ENST00000219299 IFIT1BQ5T764 474 aaKnown RBP10.92□□□□□ -0.66
CCDC113-201ENST00000219299 ADAMTSL3P82987 1691 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 SGSM2O43147 1006 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 CCP110O43303 1012 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 PRC1O43663 620 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 CPA1P15085 419 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 ZSCAN30Q86W11 494 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 CELF1Q92879 486 aaKnown RBP10.92□□□□□ -0.66
CCDC113-201ENST00000219299 LEMD3Q9Y2U8 911 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 AOX1Q06278 1338 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 SCNN1DP51172 638 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 GRAPQ13588 217 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 PI16Q6UXB8 463 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 GRAPLQ8TC17 118 aaPredicted RBP10.92□□□□□ -0.66
CCDC113-201ENST00000219299 TRIM5Q9C035 493 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 DBNDD1Q9H9R9 158 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 ORC3Q9UBD5 711 aaPredicted RBP10.92□□□□□ -0.66
CCDC113-201ENST00000219299 RAD50Q92878 1312 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 ZBTB43O43298 467 aa10.91□□□□□ -0.66
CCDC113-201ENST00000219299 NPR1P16066 1061 aa10.91□□□□□ -0.66
CCDC113-201ENST00000219299 KIF5BP33176 963 aa10.91□□□□□ -0.66
CCDC113-201ENST00000219299 Q6ZUG5 572 aa10.91□□□□□ -0.66
CCDC113-201ENST00000219299 TTLL6Q8N841 843 aa10.91□□□□□ -0.66
CCDC113-201ENST00000219299 SEC62Q99442 399 aaKnown RBP10.91□□□□□ -0.66
CCDC113-201ENST00000219299 C21orf2O43822 256 aa10.91□□□□□ -0.66
CCDC113-201ENST00000219299 ANAPC15P60006 121 aa10.91□□□□□ -0.66
CCDC113-201ENST00000219299 ZKSCAN3Q9BRR0 538 aa10.91□□□□□ -0.66
CCDC113-201ENST00000219299 GSPT1P15170 499 aaKnown RBP10.91□□□□□ -0.66
CCDC113-201ENST00000219299 DLGAP5Q15398 846 aa10.91□□□□□ -0.66
CCDC113-201ENST00000219299 MAPKAPK5Q8IW41 473 aa10.91□□□□□ -0.66
CCDC113-201ENST00000219299 JMYQ8N9B5 988 aa10.91□□□□□ -0.66
CCDC113-201ENST00000219299 NOL7Q9UMY1 257 aaKnown RBP10.91□□□□□ -0.66
CCDC113-201ENST00000219299 GPR101Q96P66 508 aaPredicted RBP10.91□□□□□ -0.66
CCDC113-201ENST00000219299 USP26Q9BXU7 913 aa10.91□□□□□ -0.66
CCDC113-201ENST00000219299 MAST3O60307 1309 aa10.9□□□□□ -0.66
CCDC113-201ENST00000219299 LEKR1Q6ZMV7 388 aa10.9□□□□□ -0.66
CCDC113-201ENST00000219299 CAMTA2O94983 1202 aa10.9□□□□□ -0.66
CCDC113-201ENST00000219299 PDE6AP16499 860 aa10.9□□□□□ -0.66
CCDC113-201ENST00000219299 ZNF76P36508 570 aa10.9□□□□□ -0.66
CCDC113-201ENST00000219299 MASTLQ96GX5 879 aa10.9□□□□□ -0.66
CCDC113-201ENST00000219299 SLC26A6Q9BXS9 759 aa10.9□□□□□ -0.66
CCDC113-201ENST00000219299 CARMIL3Q8ND23 1372 aa10.9□□□□□ -0.66
CCDC113-201ENST00000219299 SSRP1Q08945 709 aaKnown RBP10.9□□□□□ -0.66
CCDC113-201ENST00000219299 PDIA6Q15084 440 aa10.9□□□□□ -0.66
CCDC113-201ENST00000219299 TMX3Q96JJ7 454 aa10.9□□□□□ -0.66
CCDC113-201ENST00000219299 HAUS7Q99871 368 aa10.9□□□□□ -0.66
CCDC113-201ENST00000219299 KINO60870 393 aaKnown RBP10.9□□□□□ -0.67
CCDC113-201ENST00000219299 WDHD1O75717 1129 aaPredicted RBP10.9□□□□□ -0.67
CCDC113-201ENST00000219299 NF2P35240 595 aa10.9□□□□□ -0.67
CCDC113-201ENST00000219299 TNNI2P48788 182 aa10.9□□□□□ -0.67
CCDC113-201ENST00000219299 DHX8Q14562 1220 aaKnown RBP10.9□□□□□ -0.67
CCDC113-201ENST00000219299 TMTC2Q8N394 836 aa10.9□□□□□ -0.67
CCDC113-201ENST00000219299 TGFBRAP1Q8WUH2 860 aa10.9□□□□□ -0.67
CCDC113-201ENST00000219299 BSDC1Q9NW68 430 aaPredicted RBP10.9□□□□□ -0.67
CCDC113-201ENST00000219299 B4E1Z4 1266 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 H0YHG0 523 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 RDXP35241 583 aaKnown RBP10.89□□□□□ -0.67
CCDC113-201ENST00000219299 POLA2Q14181 598 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 TMC4Q7Z404 712 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 TEKT1Q969V4 418 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 CDK5RAP3Q96JB5 506 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 TXLNAP40222 546 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 PDCL3Q9H2J4 239 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 PATL2C9JE40 543 aaKnown RBP10.89□□□□□ -0.67
CCDC113-201ENST00000219299 NLRP5P59047 1200 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 DHX32Q7L7V1 743 aaKnown RBP10.89□□□□□ -0.67
CCDC113-201ENST00000219299 CCDC112Q8NEF3 446 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 ANTXR1Q9H6X2 564 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 ZNF408Q9H9D4 720 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 GPR108Q9NPR9 543 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 H7C1D1 291 aa10.89□□□□□ -0.67
CCDC113-201ENST00000219299 DALRD3Q5D0E6 543 aaKnown RBP10.89□□□□□ -0.67
CCDC113-201ENST00000219299 A0A0D9SFI3 127 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 RAD17O75943 681 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 RXRAP19793 462 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 PRKG1Q13976 671 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 PDCL2Q8N4E4 241 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 PXDNQ92626 1479 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 SPATA32Q96LK8 384 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 USP40Q9NVE5 1235 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 GJB2P29033 226 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 RAB3GAP1Q15042 981 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 CFAP45Q9UL16 551 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 MINPP1Q9UNW1 487 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 MTX1Q13505 466 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 RTN1Q16799 776 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 CCDC93Q567U6 631 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 PIM2Q9P1W9 311 aa10.88□□□□□ -0.67
CCDC113-201ENST00000219299 USP17L12C9JPN9 530 aa10.87□□□□□ -0.67
CCDC113-201ENST00000219299 USP17L21D6R901 530 aa10.87□□□□□ -0.67
CCDC113-201ENST00000219299 APOBRQ0VD83 1088 aa10.87□□□□□ -0.67
CCDC113-201ENST00000219299 INTS5Q6P9B9 1019 aaKnown RBP10.87□□□□□ -0.67
CCDC113-201ENST00000219299 ZNF34Q8IZ26 560 aa10.87□□□□□ -0.67
CCDC113-201ENST00000219299 SDR42E1Q8WUS8 393 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms