RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ANKRD2Q9GZV1 360 aa34.99■■■■□ 3.19
PABPN1-201ENST00000216727 LRP2BPQ9P2M1 347 aa34.99■■■■□ 3.19
PABPN1-201ENST00000216727 CTDNEP1O95476 244 aa34.98■■■■□ 3.19
PABPN1-201ENST00000216727 ANTXR2P58335 489 aa34.98■■■■□ 3.19
PABPN1-201ENST00000216727 PHF14O94880 888 aa34.98■■■■□ 3.19
PABPN1-201ENST00000216727 PANK2Q9BZ23 570 aa34.98■■■■□ 3.19
PABPN1-201ENST00000216727 KIF3AQ9Y496 699 aa34.98■■■■□ 3.19
PABPN1-201ENST00000216727 SALL1Q9NSC2 1324 aa34.97■■■■□ 3.19
PABPN1-201ENST00000216727 FIBPO43427 364 aa34.97■■■■□ 3.19
PABPN1-201ENST00000216727 TM4SF1P30408 202 aa34.97■■■■□ 3.19
PABPN1-201ENST00000216727 TBC1D10CQ8IV04 446 aa34.97■■■■□ 3.19
PABPN1-201ENST00000216727 IFNL3Q8IZI9 196 aa34.97■■■■□ 3.19
PABPN1-201ENST00000216727 FAM184AQ8NB25 1140 aa34.97■■■■□ 3.19
PABPN1-201ENST00000216727 FAM84BQ96KN1 310 aaPredicted RBP34.97■■■■□ 3.19
PABPN1-201ENST00000216727 SEMA3EO15041 775 aa34.96■■■■□ 3.19
PABPN1-201ENST00000216727 KRT85P78386 507 aa34.96■■■■□ 3.19
PABPN1-201ENST00000216727 EPB41L4AQ9HCS5 686 aaPredicted RBP34.96■■■■□ 3.19
PABPN1-201ENST00000216727 DENND2AQ9ULE3 1009 aa34.96■■■■□ 3.19
PABPN1-201ENST00000216727 PTPDC1A2A3K4 754 aa34.95■■■■□ 3.19
PABPN1-201ENST00000216727 CCT2P78371 535 aaKnown RBP34.95■■■■□ 3.19
PABPN1-201ENST00000216727 FBXO33Q7Z6M2 555 aa34.95■■■■□ 3.19
PABPN1-201ENST00000216727 DDX11Q96FC9 970 aa34.95■■■■□ 3.19
PABPN1-201ENST00000216727 ARMT1Q9H993 441 aa34.95■■■■□ 3.19
PABPN1-201ENST00000216727 WTIPA6NIX2 430 aaPredicted RBP34.94■■■■□ 3.18
PABPN1-201ENST00000216727 NFIXQ14938 502 aa34.94■■■■□ 3.18
PABPN1-201ENST00000216727 SLC27A3Q5K4L6 730 aa34.94■■■■□ 3.18
PABPN1-201ENST00000216727 FERMT3Q86UX7 667 aa34.94■■■■□ 3.18
PABPN1-201ENST00000216727 VPS37DQ86XT2 251 aa34.94■■■■□ 3.18
PABPN1-201ENST00000216727 COL1A1P02452 1464 aaPredicted RBP34.94■■■■□ 3.18
PABPN1-201ENST00000216727 NAPBQ9H115 298 aa34.94■■■■□ 3.18
PABPN1-201ENST00000216727 GSG1L2A8MUP6 293 aa34.93■■■■□ 3.18
PABPN1-201ENST00000216727 LRSAM1Q6UWE0 723 aa34.93■■■■□ 3.18
PABPN1-201ENST00000216727 GPHNQ9NQX3 736 aaPredicted RBP34.93■■■■□ 3.18
PABPN1-201ENST00000216727 IQSEC3Q9UPP2 1182 aaPredicted RBP34.93■■■■□ 3.18
PABPN1-201ENST00000216727 NAA16Q6N069 864 aaPredicted RBP34.93■■■■□ 3.18
PABPN1-201ENST00000216727 PDS5AQ29RF7 1337 aaKnown RBP34.92■■■■□ 3.18
PABPN1-201ENST00000216727 UBR3Q6ZT12 1888 aa34.92■■■■□ 3.18
PABPN1-201ENST00000216727 CCDC24Q8N4L8 307 aa34.92■■■■□ 3.18
PABPN1-201ENST00000216727 NCOA5Q9HCD5 579 aaKnown RBP34.92■■■■□ 3.18
PABPN1-201ENST00000216727 NAP1L2Q9ULW6 460 aaPredicted RBP34.92■■■■□ 3.18
PABPN1-201ENST00000216727 ELP1O95163 1332 aa34.92■■■■□ 3.18
PABPN1-201ENST00000216727 TNRC6CQ9HCJ0 1690 aaKnown RBP34.91■■■■□ 3.18
PABPN1-201ENST00000216727 H3BQV1 296 aa34.91■■■■□ 3.18
PABPN1-201ENST00000216727 ZBTB22O15209 634 aa34.91■■■■□ 3.18
PABPN1-201ENST00000216727 IFFO2Q5TF58 517 aa34.91■■■■□ 3.18
PABPN1-201ENST00000216727 LCORLQ8N3X6 602 aa34.91■■■■□ 3.18
PABPN1-201ENST00000216727 NACAP1Q9BZK3 213 aa34.91■■■■□ 3.18
PABPN1-201ENST00000216727 ZSCAN16Q9H4T2 348 aaPredicted RBP34.91■■■■□ 3.18
PABPN1-201ENST00000216727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.91■■■■□ 3.18
PABPN1-201ENST00000216727 SYCE3A1L190 88 aa34.9■■■■□ 3.18
PABPN1-201ENST00000216727 NPHP1O15259 732 aa34.9■■■■□ 3.18
PABPN1-201ENST00000216727 DHX16O60231 1041 aaKnown RBP34.9■■■■□ 3.18
PABPN1-201ENST00000216727 KLF18A0A0U1RQI7 1052 aa34.89■■■■□ 3.18
PABPN1-201ENST00000216727 RESTQ13127 1097 aa34.89■■■■□ 3.18
PABPN1-201ENST00000216727 KRT27Q7Z3Y8 459 aa34.89■■■■□ 3.18
PABPN1-201ENST00000216727 ABCF2Q9UG63 623 aa34.89■■■■□ 3.18
PABPN1-201ENST00000216727 TIAM2Q8IVF5 1701 aa34.89■■■■□ 3.18
PABPN1-201ENST00000216727 CYP7A1P22680 504 aa34.89■■■■□ 3.18
PABPN1-201ENST00000216727 CNBD1Q8NA66 436 aa34.89■■■■□ 3.18
PABPN1-201ENST00000216727 SCAND2PQ9GZW5 306 aaPredicted RBP34.89■■■■□ 3.18
PABPN1-201ENST00000216727 ANGEL1Q9UNK9 670 aaKnown RBP34.89■■■■□ 3.18
PABPN1-201ENST00000216727 HPS5Q9UPZ3 1129 aa34.89■■■■□ 3.18
PABPN1-201ENST00000216727 SLC4A4Q9Y6R1 1079 aa34.89■■■■□ 3.18
PABPN1-201ENST00000216727 AEBP2Q6ZN18 517 aaPredicted RBP34.88■■■■□ 3.17
PABPN1-201ENST00000216727 RAI14Q9P0K7 980 aa34.88■■■■□ 3.17
PABPN1-201ENST00000216727 TMEM87BQ96K49 555 aa34.88■■■■□ 3.17
PABPN1-201ENST00000216727 CYB5R4Q7L1T6 521 aa34.87■■■■□ 3.17
PABPN1-201ENST00000216727 CACNA1SQ13698 1873 aa34.86■■■■□ 3.17
PABPN1-201ENST00000216727 GOLGA8BA8MQT2 603 aa34.86■■■■□ 3.17
PABPN1-201ENST00000216727 CNNM2Q9H8M5 875 aa34.86■■■■□ 3.17
PABPN1-201ENST00000216727 SH2B2O14492 632 aaPredicted RBP34.86■■■■□ 3.17
PABPN1-201ENST00000216727 PRKAB2O43741 272 aa34.86■■■■□ 3.17
PABPN1-201ENST00000216727 NASPP49321 788 aaPredicted RBP34.86■■■■□ 3.17
PABPN1-201ENST00000216727 FAM173BQ6P4H8 233 aa34.86■■■■□ 3.17
PABPN1-201ENST00000216727 TTC6Q86TZ1 520 aa34.86■■■■□ 3.17
PABPN1-201ENST00000216727 NEDD4P46934 1319 aa34.86■■■■□ 3.17
PABPN1-201ENST00000216727 BRWD3Q6RI45 1802 aa34.85■■■■□ 3.17
PABPN1-201ENST00000216727 HIBADHP31937 336 aaKnown RBP34.85■■■■□ 3.17
PABPN1-201ENST00000216727 CCDC183Q5T5S1 534 aa34.85■■■■□ 3.17
PABPN1-201ENST00000216727 ADGRA1Q86SQ6 560 aa34.85■■■■□ 3.17
PABPN1-201ENST00000216727 KLHL34Q8N239 644 aa34.85■■■■□ 3.17
PABPN1-201ENST00000216727 MIGA1Q8NAN2 632 aa34.85■■■■□ 3.17
PABPN1-201ENST00000216727 B4E1Z4 1266 aa34.84■■■■□ 3.17
PABPN1-201ENST00000216727 KLRK1P26718 216 aa34.84■■■■□ 3.17
PABPN1-201ENST00000216727 GRAPQ13588 217 aa34.84■■■■□ 3.17
PABPN1-201ENST00000216727 GRAPLQ8TC17 118 aaPredicted RBP34.84■■■■□ 3.17
PABPN1-201ENST00000216727 GYS1P13807 737 aa34.84■■■■□ 3.17
PABPN1-201ENST00000216727 TDO2P48775 406 aa34.84■■■■□ 3.17
PABPN1-201ENST00000216727 AKNAD1Q5T1N1 836 aa34.84■■■■□ 3.17
PABPN1-201ENST00000216727 CHD4Q14839 1912 aa34.83■■■■□ 3.17
PABPN1-201ENST00000216727 MAGEB6P1A0A0J9YX57 407 aa34.83■■■■□ 3.17
PABPN1-201ENST00000216727 HMGB2P26583 209 aaKnown RBP34.83■■■■□ 3.17
PABPN1-201ENST00000216727 NKX2-3Q8TAU0 364 aa34.83■■■■□ 3.17
PABPN1-201ENST00000216727 FDPSP14324 419 aaKnown RBP34.82■■■■□ 3.17
PABPN1-201ENST00000216727 PRR5LQ6MZQ0 368 aa34.82■■■■□ 3.17
PABPN1-201ENST00000216727 STAG1Q8WVM7 1258 aa34.82■■■■□ 3.17
PABPN1-201ENST00000216727 KRT23Q9C075 422 aa34.82■■■■□ 3.17
PABPN1-201ENST00000216727 IRS2Q9Y4H2 1338 aa34.82■■■■□ 3.16
PABPN1-201ENST00000216727 LETM1O95202 739 aaPredicted RBP34.82■■■■□ 3.16
PABPN1-201ENST00000216727 RIOK1Q9BRS2 568 aaKnown RBP34.82■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms