RNA–Protein interactions for RNA: ENST00000216366.8

AP4S1-201, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 1 (best) BASIC

Gene AP4S1, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-201ENST00000216366 HPSEQ9Y251 543 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 MROH7-TTC4A0A0A0MT08 1334 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 PHLPP2Q6ZVD8 1323 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 KIF1AQ12756 1690 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 TJP1Q07157 1748 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 NPHP1O15259 732 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 PRC1O43663 620 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 CIAO1O76071 339 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 ATP1A3P13637 1013 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 CLCN6P51797 869 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 DCAF5Q96JK2 942 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 ST7Q9NRC1 585 aa13.16□□□□□ -0.3
AP4S1-201ENST00000216366 FAM237AA0A1B0GTK4 181 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 FANCGO15287 622 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 CYP27B1O15528 508 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 NRDCO43847 1150 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 FGAP02671 866 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 LMOD1P29536 600 aaPredicted RBP13.15□□□□□ -0.3
AP4S1-201ENST00000216366 IMMTQ16891 758 aaKnown RBP13.15□□□□□ -0.3
AP4S1-201ENST00000216366 SYNE3Q6ZMZ3 975 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 ANKLE2Q86XL3 938 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 CREBRFQ8IUR6 639 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 LAMB4A4D0S4 1761 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 GOLGA8BA8MQT2 603 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 CCP110O43303 1012 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 ZRANB2O95218 330 aaKnown RBP eCLIP13.15□□□□□ -0.3
AP4S1-201ENST00000216366 C4AP0C0L4 1744 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 C4BP0C0L5 1744 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
AP4S1-201ENST00000216366 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 REXO1L1PQ8IX06 675 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 DPF2Q92785 391 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 ZNF594Q96JF6 807 aaPredicted RBP13.15□□□□□ -0.3
AP4S1-201ENST00000216366 NLRP2Q9NX02 1062 aa13.15□□□□□ -0.3
AP4S1-201ENST00000216366 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
AP4S1-201ENST00000216366 WDR19Q8NEZ3 1342 aa13.14□□□□□ -0.31
AP4S1-201ENST00000216366 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
AP4S1-201ENST00000216366 HAND2P61296 217 aa13.14□□□□□ -0.31
AP4S1-201ENST00000216366 CWC25Q9NXE8 425 aaPredicted RBP13.14□□□□□ -0.31
AP4S1-201ENST00000216366 ARHGAP29Q52LW3 1261 aa13.14□□□□□ -0.31
AP4S1-201ENST00000216366 PUS3Q9BZE2 481 aaKnown RBP13.14□□□□□ -0.31
AP4S1-201ENST00000216366 DNAI1Q9UI46 699 aa13.14□□□□□ -0.31
AP4S1-201ENST00000216366 NUP188Q5SRE5 1749 aa13.14□□□□□ -0.31
AP4S1-201ENST00000216366 PPP6R2O75170 966 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 ZFYP08048 801 aaPredicted RBP13.13□□□□□ -0.31
AP4S1-201ENST00000216366 PNMA6AP0CW24 399 aaPredicted RBP13.13□□□□□ -0.31
AP4S1-201ENST00000216366 SYKP43405 635 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 PLA2G4AP47712 749 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 UBASH3AP57075 661 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 PTPAQ15257 358 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 ISM2Q6H9L7 571 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 TTLL7Q6ZT98 887 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 FCHSD1Q86WN1 690 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 TMEM139Q8IV31 216 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 VSTM4Q8IW00 320 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 CPDO75976 1380 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 CBFA2T2O43439 604 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
AP4S1-201ENST00000216366 MYL5Q02045 173 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 LRRFIP1Q32MZ4 808 aaKnown RBP13.13□□□□□ -0.31
AP4S1-201ENST00000216366 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
AP4S1-201ENST00000216366 SRRTQ9BXP5 876 aaKnown RBP13.13□□□□□ -0.31
AP4S1-201ENST00000216366 CCDC66A2RUB6 948 aa13.12□□□□□ -0.31
AP4S1-201ENST00000216366 CPLX1O14810 134 aa13.12□□□□□ -0.31
AP4S1-201ENST00000216366 TADA3O75528 432 aa13.12□□□□□ -0.31
AP4S1-201ENST00000216366 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
AP4S1-201ENST00000216366 RAB11FIP4Q86YS3 637 aa13.12□□□□□ -0.31
AP4S1-201ENST00000216366 PUS7LQ9H0K6 701 aaKnown RBP13.12□□□□□ -0.31
AP4S1-201ENST00000216366 PARP3Q9Y6F1 533 aa13.12□□□□□ -0.31
AP4S1-201ENST00000216366 ALS2Q96Q42 1657 aa13.12□□□□□ -0.31
AP4S1-201ENST00000216366 PKD1L3Q7Z443 1732 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 MYO1BO43795 1136 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 APPBP2Q92624 585 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 MAP3K14Q99558 947 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 COL18A1P39060 1754 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 VWA3AA6NCI4 1184 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 ADORA1P30542 326 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 WASHC4Q2M389 1173 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 RESP18Q5W5W9 173 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 VPS37DQ86XT2 251 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 FOXP4Q8IVH2 680 aaPredicted RBP13.11□□□□□ -0.31
AP4S1-201ENST00000216366 UBXN4Q92575 508 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 AIFM3Q96NN9 605 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 NOL10Q9BSC4 688 aaKnown RBP13.11□□□□□ -0.31
AP4S1-201ENST00000216366 UTP14AQ9BVJ6 771 aaKnown RBP13.11□□□□□ -0.31
AP4S1-201ENST00000216366 CEP126Q9P2H0 1117 aa13.11□□□□□ -0.31
AP4S1-201ENST00000216366 ZMYM6O95789 1325 aa13.1□□□□□ -0.31
AP4S1-201ENST00000216366 EFCAB8A8MWE9 144 aa13.1□□□□□ -0.31
AP4S1-201ENST00000216366 TMEM232C9JQI7 657 aa13.1□□□□□ -0.31
AP4S1-201ENST00000216366 SERPINC1P01008 464 aa13.1□□□□□ -0.31
AP4S1-201ENST00000216366 CYP2C19P33261 490 aa13.1□□□□□ -0.31
AP4S1-201ENST00000216366 CABP4P57796 275 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms