RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ARL4DP49703 201 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 TMTC2Q8N394 836 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 EHBP1Q8NDI1 1231 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 L3MBTL3Q96JM7 780 aaPredicted RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 ANO3Q9BYT9 981 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 TMEM247A6NEH6 219 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 F8W031 263 aaPredicted RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 PPP2R5CQ13362 524 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 LIN9Q5TKA1 542 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 NLRX1Q86UT6 975 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 MTUS1Q9ULD2 1270 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 RPS6KA2Q15349 733 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 GPATCH11Q8N954 259 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.86□□□□□ -1.79
NEB-201ENST00000172853 TEKT2Q9UIF3 430 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 RAB11FIP3O75154 756 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 CCNA1P78396 465 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 KLHL10Q6JEL2 608 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 TTC6Q86TZ1 520 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 SCG3Q8WXD2 468 aaKnown RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 GBP7Q8N8V2 638 aaPredicted RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 ENGASEQ8NFI3 743 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 CSRNP1Q96S65 589 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 RRAGDQ9NQL2 400 aaPredicted RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 GINS2Q9Y248 185 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 TNFAIP1Q13829 316 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 ZFYP08048 801 aaPredicted RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 ZNF853P0CG23 659 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 BANK1Q8NDB2 785 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 GNAT3A8MTJ3 354 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 ZNF75DP51815 510 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 TYRO3Q06418 890 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 PTK2BQ14289 1009 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 HERC4Q5GLZ8 1057 aaPredicted RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 LARGE2Q8N3Y3 721 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 C8orf76Q96K31 380 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 ANGPTL3Q9Y5C1 460 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 BMP15O95972 392 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 ATP5DP30049 168 aa3.86□□□□□ -1.79
NEB-201ENST00000172853 TSTA3Q13630 321 aaPredicted RBP3.86□□□□□ -1.79
NEB-201ENST00000172853 MFSD6Q6ZSS7 791 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 RNF169Q8NCN4 708 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 LZICQ8WZA0 190 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 RRP36Q96EU6 259 aaKnown RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 VCX3BQ9H321 246 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 BRD1O95696 1058 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 RNF219Q5W0B1 726 aaPredicted RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 MAATS1Q7Z4T9 603 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 EXOC8Q8IYI6 725 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 KIF1BPQ96EK5 621 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 ERCC3P19447 782 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 TMTC4Q5T4D3 741 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 IRAK1BP1Q5VVH5 260 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 RUFY4Q6ZNE9 571 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 AFAP1Q8N556 730 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 STX8Q9UNK0 236 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 DOLKQ9UPQ8 538 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 ATP6V1AP38606 617 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 MCM6Q14566 821 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 EFCAB13Q8IY85 973 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 DNAJC7Q99615 494 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 EVA1BQ9NVM1 165 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 SUFUQ9UMX1 484 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 PHBP35232 272 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.85□□□□□ -1.79
NEB-201ENST00000172853 TEX12Q9BXU0 123 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 CNOT7Q9UIV1 285 aaKnown RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 BZW2Q9Y6E2 419 aaKnown RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 ZNF197O14709 1029 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 TBC1D12O60347 775 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 PRMT3O60678 531 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 ZSCAN20P17040 1043 aaPredicted RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 MCMDC2Q4G0Z9 681 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 ZNF212Q9UDV6 495 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 MTRF1LQ9UGC7 380 aaKnown RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 MOSPD1Q9UJG1 213 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 TRAPPC3LQ5T215 181 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 GPR161Q8N6U8 529 aaKnown RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 C16orf45Q96MC5 204 aaPredicted RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 ADPGKQ9BRR6 497 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 DDB1Q16531 1140 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 SULF1Q8IWU6 871 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 RNF217Q8TC41 542 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 CCDC138Q96M89 665 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 MAP3K20Q9NYL2 800 aaKnown RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 FYCO1Q9BQS8 1478 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 FMNL1O95466 1100 aaPredicted RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 GOLGA8FQ08AF8 430 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 GOLGA8DPQ0D2H9 430 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 DCAF15Q66K64 600 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 OLA1Q9NTK5 396 aaKnown RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 RABGAP1Q9Y3P9 1069 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 CCDC171Q6TFL3 1326 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 TOP1P11387 765 aaKnown RBP3.85□□□□□ -1.79
NEB-201ENST00000172853 ZNF18P17022 549 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 NNMTP40261 264 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 LNPKQ9C0E8 428 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 MLXIPQ9HAP2 919 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 HYOU1Q9Y4L1 999 aa3.85□□□□□ -1.79
NEB-201ENST00000172853 NFKBIL1Q9UBC1 381 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms