RNA–Protein interactions for RNA: ENSMUST00000221654.1

Rnf220-212, Transcript of E3 ubiquitin-protein ligase Rnf220, mousemouse

TSL 1 (best) BASIC

Gene Rnf220, Length 1,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220-212ENSMUST00000221654 E4f1Q8CCE9 783 aa29.24■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Mtmr3Q8K296 1196 aa29.24■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Sil1Q9EPK6 465 aa29.24■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Gm7347D3YYI9 267 aa29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Speer4aF8VPX6 267 aa29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Tuft1O08970 390 aa29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Celf1P28659 486 aaKnown RBP29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 LyarQ08288 388 aaKnown RBP29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Zfp51Q3U4L8 781 aa29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Prdm1Q60636 856 aa29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Agtpbp1Q641K1 1218 aa29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 U2af1l4Q8BGJ9 220 aa29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Terf2ipQ91VL8 393 aa29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Pold4Q9CWP8 107 aa29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Cxcl11Q9JHH5 100 aa29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Myh4Q5SX39 1939 aa29.23■■■□□ 2.27
Rnf220-212ENSMUST00000221654 FosbP13346 338 aa29.22■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Ppfia3P60469 1194 aa29.22■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Rbm15bQ6PHZ5 887 aaKnown RBP29.22■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Rnf214Q8BFU3 668 aaKnown RBP29.22■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Trim44Q9QXA7 346 aa29.22■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Myh2G3UW82 1942 aa29.22■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Fam184aE9PW83 1143 aa29.22■■■□□ 2.27
Rnf220-212ENSMUST00000221654 GalcP54818 684 aa29.22■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Cnnm2Q3TWN3 875 aa29.22■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Ccdc82Q6PG04 518 aa29.22■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Wdr33Q8K4P0 1330 aaKnown RBP29.21■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Gm20425E9Q035 978 aaKnown RBP29.21■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Lnx1O70263 728 aa29.21■■■□□ 2.27
Rnf220-212ENSMUST00000221654 SrprbP47758 269 aa29.21■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Stag1Q9D3E6 1258 aa29.21■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Arfgef1G3X9K3 1846 aaKnown RBP29.21■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Rbbp6P97868 1790 aaKnown RBP29.21■■■□□ 2.27
Rnf220-212ENSMUST00000221654 A0A1W2P7S8 802 aa29.2■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Cd3dP04235 173 aa29.2■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Cdc5lQ6A068 802 aaKnown RBP29.2■■■□□ 2.27
Rnf220-212ENSMUST00000221654 Cyp26a1O55127 497 aa29.2■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Rcan1Q9JHG6 198 aa29.2■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Ubr3Q5U430 1889 aa29.19■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Usp28Q5I043 1051 aa29.19■■■□□ 2.26
Rnf220-212ENSMUST00000221654 VmacQ8BP01 174 aa29.19■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Mknk2Q8CDB0 459 aa29.19■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Rgs12Q8CGE9 1381 aa29.19■■■□□ 2.26
Rnf220-212ENSMUST00000221654 HlfQ8BW74 295 aa29.18■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Ccdc47Q9D024 483 aaKnown RBP29.18■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Rcan3Q9JKK0 239 aa29.18■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Cfap99A0A140LIX9 648 aa29.18■■■□□ 2.26
Rnf220-212ENSMUST00000221654 AU015836B2RUM3 263 aa29.18■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Oas2E9Q9A9 742 aa29.18■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Bola3Q8CEI1 110 aa29.18■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Cdc45Q9Z1X9 566 aa29.18■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Sh3tc1G3X9F6 1346 aa29.17■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Dennd3A2RT67 1274 aa29.17■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Metap2O08663 478 aaKnown RBP29.17■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Ppp1r21Q3TDD9 780 aa29.17■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Lins1Q3U1D0 764 aa29.17■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Rbm26Q6NZN0 1012 aaKnown RBP29.17■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Paf1Q8K2T8 535 aa29.17■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Ly75Q60767 1723 aa29.17■■■□□ 2.26
Rnf220-212ENSMUST00000221654 CpdO89001 1377 aa29.17■■■□□ 2.26
Rnf220-212ENSMUST00000221654 1700113H08RikE9Q9Q5 327 aa29.16■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Mcm3P25206 812 aaKnown RBP29.16■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Q3TYL0 343 aa29.16■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Kif13bA0A286YCV9 1847 aa29.16■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Fnbp4Q6ZQ03 1031 aa29.16■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Naaladl2A0A0N4SUJ3 795 aa29.15■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Me1P06801 572 aa29.15■■■□□ 2.26
Rnf220-212ENSMUST00000221654 DymQ8CHY3 669 aa29.15■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Ankrd13dQ6PD24 605 aa29.14■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Hps6Q8BLY7 805 aa29.14■■■□□ 2.26
Rnf220-212ENSMUST00000221654 SdsQ8VBT2 327 aa29.14■■■□□ 2.26
Rnf220-212ENSMUST00000221654 Ccdc112A0AUP1 442 aa29.14■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Mapkapk5O54992 473 aa29.14■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Cdkl5Q3UTQ8 938 aa29.14■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Gm5592Q3V0A6 857 aa29.14■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Ckap2Q3V1H1 664 aa29.14■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Zscan25B2RX31 543 aa29.13■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Tmem109Q3UBX0 243 aa29.13■■■□□ 2.25
Rnf220-212ENSMUST00000221654 TrhQ62361 256 aa29.13■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Rnf41Q8BH75 317 aa29.13■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Sirt2Q8VDQ8 389 aa29.13■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Dydc2Q9D3X8 139 aa29.13■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Kcnn1Q9EQR3 537 aa29.13■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Aox3G3X982 1335 aa29.13■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Tlr8P58682 1032 aa29.12■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Tex2Q6ZPJ0 1128 aaKnown RBP29.12■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Bicd2Q921C5 820 aa29.12■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Chd1lQ9CXF7 900 aa29.12■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Klhl34A2AI76 644 aa29.12■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Pde11aP0C1Q2 933 aa29.12■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Cypt2Q6P924 180 aa29.12■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Atxn2lQ7TQH0 1049 aaKnown RBP29.12■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Ccng2O08918 344 aa29.11■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Olfr118Q7TRJ6 321 aa29.11■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Cfap69Q8BH53 942 aa29.11■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Add3Q9QYB5 706 aaKnown RBP29.11■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Col11a2Q64739 1736 aa29.1■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Cfap58B2RW38 873 aa29.1■■■□□ 2.25
Rnf220-212ENSMUST00000221654 Cplx2P84086 134 aa29.1■■■□□ 2.25
Rnf220-212ENSMUST00000221654 PcQ05920 1178 aa29.1■■■□□ 2.25
Retrieved 100 of 22,080 RNA–protein pairs in 103.5 ms