RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Ccpg1Q640L3 753 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 PrimpolQ6P1E7 537 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Kdm1aQ6ZQ88 853 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Fgd5Q80UZ0 1219 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Rint1Q8BZ36 792 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 BrapQ99MP8 591 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Zfp644E9QA22 1323 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Rbm8a2A0A0N4SUH6 174 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Prim1P20664 417 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Eef2P58252 858 aaKnown RBP10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Krit1Q6S5J6 736 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Rab3gap1Q80UJ7 981 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Tbc1d5Q80XQ2 815 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Rbm5Q91YE7 815 aaKnown RBP10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Rbm8aQ9CWZ3 174 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Taf7lQ9D3R9 471 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 ChmQ9QXG2 665 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Map3k5O35099 1380 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Fgd6Q69ZL1 1399 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Gm7298A0A0N4SVU1 1476 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Prpf40bQ80W14 870 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Csrnp2Q8BGQ2 534 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Nrbf2Q8VCQ3 287 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Sar1bQ9CQC9 198 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 RabggtaQ9JHK4 567 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 LnpkQ7TQ95 425 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ccdc92Q8VDN4 314 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Kif17Q99PW8 1038 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Pdcd7Q9WTY1 482 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Duox2A2AQ99 1517 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Kif6E9PX57 802 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Slc12a2P55012 1205 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Zc3h18Q0P678 948 aaKnown RBP10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 EappQ5BU09 281 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Duxf3A0A0N4SV92 674 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Apol10bG3X9K7 334 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Rpl13P47963 211 aaKnown RBP10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Dennd6aQ8BH65 605 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Kif2cQ922S8 721 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Bcl11bQ99PV8 884 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ccdc105Q9D4K7 499 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Nup62clA2AG10 272 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Skor2A7M7C7 1008 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Gm5934D3Z4U6 212 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 RpsaP14206 295 aaKnown RBP10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Btbd11Q6GQW0 1109 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Rab11fip4Q8BQP8 635 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Spata16Q8C636 571 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Fam114a2Q8VE88 497 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 1700109H08RikQ9D9C0 210 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ttc41Q692V3 1318 aa10.16□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Zmym4A2A791 1549 aaKnown RBP10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Gbp10Q000W5 611 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 PsdQ5DTT2 1024 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Tsr1Q5SWD9 803 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Acbd5Q5XG73 508 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Trim27Q62158 513 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 4930572O03RikQ8C5Y0 211 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Acot9Q9R0X4 439 aaKnown RBP10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Zranb1Q7M760 708 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Tcp11l1Q8BTG3 509 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Plcd1Q8R3B1 756 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Calr3Q9D9Q6 380 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Aox1O54754 1333 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Urb2E9Q7L1 1524 aaKnown RBP10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Pde4bB1AWC9 736 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Calm1P0DP26 149 aaKnown RBP10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Calm2P0DP27 149 aaKnown RBP10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Calm3P0DP28 149 aaKnown RBP10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ctnna1P26231 906 aaKnown RBP10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Evi5P97366 809 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Klhl40Q9D783 621 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 WtapQ9ER69 396 aa10.15□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ppfia4B8QI36 1187 aa10.15□□□□□ -0.79
Ptpre-204ENSMUST00000209979 P4ha1Q60715 534 aa10.15□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Cdk19Q8BWD8 501 aa10.15□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Sec63Q8VHE0 760 aaKnown RBP10.15□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ift81O35594 676 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Psmb7P70195 277 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Egfem1Q8C088 590 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Dnaaf1Q9D2H9 634 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ccdc141E9Q8Q6 1531 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Taf4E9QAP7 1042 aaKnown RBP10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Hmgb2P30681 210 aaKnown RBP10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 GpkowQ56A08 488 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 HellsQ60848 821 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Q8BZJ8 459 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ddx41Q91VN6 622 aaKnown RBP10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 AticQ9CWJ9 592 aaKnown RBP10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Rapgef4Q9EQZ6 1011 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Mrpl40Q9Z2Q5 206 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Lrrc74aA0A1Y7VMD6 494 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Atp2b1G5E829 1220 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Parp2O88554 559 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Actn3O88990 900 aaKnown RBP10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Tcp1P11983 556 aaKnown RBP10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Rps6ka1P18653 724 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 PhexP70669 749 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ice2Q3UZ18 988 aaKnown RBP10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Rapgef3Q8VCC8 918 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms