RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Pcdhb14Q6PB90 796 aa20.08■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Ankrd1Q9CR42 319 aa20.08■□□□□ 0.81
Ckap4-202ENSMUST00000167671 Lipo1J3QME6 396 aa20.08■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Metap2O08663 478 aaKnown RBP20.08■□□□□ 0.8
Ckap4-202ENSMUST00000167671 GmnnO88513 206 aa20.08■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Nol10Q5RJG1 687 aaKnown RBP20.08■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Map10Q8BJS7 891 aa20.08■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Card10P58660 1021 aa20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Mcm6P97311 821 aa20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Sik3Q6P4S6 1311 aa20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Nwd2Q6P5U7 1742 aa20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Gm21680A0A0G2JGR8 267 aa20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Mns1Q61884 491 aa20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Etf1Q8BWY3 437 aaKnown RBP20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Tmx1Q8VBT0 278 aa20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Emilin1Q99K41 1017 aa20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Rbm33Q9CXK9 1231 aaKnown RBP20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Sept12Q9D451 317 aa20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Appbp2Q9DAX9 585 aa20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Carmil3Q3UFQ8 1375 aa20.07■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Ank1Q02357 1862 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Epha2Q03145 977 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Kmt5bQ3U8K7 883 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Mical1Q8VDP3 1048 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Mtmr6Q8VE11 617 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Col22a1E9Q7P1 1613 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Dapk3O54784 448 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 TsksO54887 585 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 H2afxP27661 143 aaKnown RBP20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Edrf1Q6GQV7 1239 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Znf653Q6YND2 615 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Wdr3Q8BHB4 942 aaKnown RBP20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Ktn1Q61595 1327 aaKnown RBP20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Ccdc121E9Q6D3 323 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Abcf1Q6P542 837 aaKnown RBP20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Trak2Q6P9N8 913 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Zkscan8Q8BSL0 588 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 GptQ8QZR5 496 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Ssfa2Q922B9 1252 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Filip1Q9CS72 1211 aa20.06■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Vgll3P85442 326 aa20.05■□□□□ 0.8
Ckap4-202ENSMUST00000167671 CtcfQ61164 736 aaKnown RBP20.05■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Fam53cQ8BXQ8 393 aa20.05■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Spata32Q8C5V0 334 aa20.05■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Ints5Q8CHT3 1018 aa20.05■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Cdc27A2A6Q5 825 aa20.05■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Pde4bB1AWC9 736 aa20.05■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Cyp2d9P11714 504 aa20.05■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Fam76aQ922G2 307 aa20.05■□□□□ 0.8
Ckap4-202ENSMUST00000167671 ChmQ9QXG2 665 aa20.05■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Wdr19Q3UGF1 1341 aa20.04■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Znf326O88291 580 aa20.04■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Prl2c1Q5SVL9 228 aa20.04■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Ciao1Q99KN2 339 aa20.04■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Zbtb43Q9DAI4 467 aa20.04■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Lmtk3Q5XJV6 1424 aa20.04■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Tnks1bp1P58871 1720 aa20.04■□□□□ 0.8
Ckap4-202ENSMUST00000167671 AW822073A0A0N4SUK1 652 aa20.04■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Kif2aP28740 705 aa20.04■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Ppp4r3bQ922R5 820 aa20.04■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Ftl2P49945 183 aa20.03■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Dpf2Q61103 391 aaKnown RBP20.03■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Kcna6Q61923 529 aa20.03■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Klhl30Q8C3F7 581 aa20.03■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Ubr2Q6WKZ8 1755 aa20.03■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Bag1Q60739 355 aa20.03■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Haus7Q8BKT8 364 aa20.03■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Tulp1Q9Z273 543 aa20.03■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Lcmt1A0A0U1RNF2 332 aa20.02■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Dnajc2P54103 621 aaKnown RBP20.02■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Krt39Q6IFX4 482 aa20.02■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Lmod1Q8BVA4 595 aa20.02■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Abca3Q8R420 1704 aa20.02■□□□□ 0.8
Ckap4-202ENSMUST00000167671 Zfp597E9Q6S0 419 aa20.02■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ugt1a6bK9J7B2 531 aa20.02■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ugt1a6Q64435 531 aa20.02■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ugt1a7cQ6ZQM8 531 aa20.02■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Tubgcp2Q921G8 905 aa20.02■□□□□ 0.79
Ckap4-202ENSMUST00000167671 BccipQ9CWI3 316 aa20.02■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ehd4Q9EQP2 541 aa20.02■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Kcnh3Q9WVJ0 1095 aa20.02■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Sycp2lA0A0M3U1B0 842 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Gm5624F6ZZG8 207 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 NefhP19246 1090 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Gpr182P43142 395 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Drc7Q6V3W6 876 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ctdspl2Q8BG15 465 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Bola3Q8CEI1 110 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Gtpbp4Q99ME9 634 aaKnown RBP20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Dctpp1Q9QY93 170 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Gm10134F6ZQC6 126 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Grin1P35438 938 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Mctp2Q5RJH2 878 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ranbp6Q8BIV3 1105 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Maats1Q8BRC6 783 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ppil4Q9CXG3 492 aaKnown RBP20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 CpdO89001 1377 aa20.01■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Gng11P61953 73 aa20■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ankrd40Q5SUE8 363 aa20■□□□□ 0.79
Ckap4-202ENSMUST00000167671 Ppp2r2cQ8BG02 447 aa20■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms