RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Chmp3Q9CQ10 224 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Rbm33Q9CXK9 1231 aaKnown RBP12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Col4a3bpQ9EQG9 624 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Ddx60E9PZQ1 1711 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Dnajc25A2ALW5 357 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Ddx58Q6Q899 926 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Slfnl1Q8BHW9 410 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Dnm3Q8BZ98 863 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Rrp1P56183 494 aaKnown RBP12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Mcm6P97311 821 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Gm12185Q5NCB2 835 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Ankle2Q6P1H6 964 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Ehd2Q8BH64 543 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Golim4Q8BXA1 655 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Usp44Q8C2S0 711 aa12.44□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Ms4a1P19437 291 aa12.43□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Spag5Q7TME2 1165 aa12.43□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Mei4Q8BRM6 389 aa12.43□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Mb21d2Q8C525 428 aa12.43□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Stk38Q91VJ4 465 aa12.43□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Erc1Q99MI1 1120 aa12.43□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Fbxl16A2RT62 479 aa12.43□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Nbr1P97432 988 aa12.43□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Hand2Q61039 217 aa12.43□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Magi2Q9WVQ1 1275 aa12.43□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 CoblQ5NBX1 1337 aaKnown RBP12.43□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Timm10P62073 90 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Ccdc102aQ3TMW1 549 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Tmem109Q3UBX0 243 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Trim25Q61510 634 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Jmjd4Q8BFT6 427 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Wdr3Q8BHB4 942 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Rufy2Q8R4C2 606 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Klc3Q91W40 508 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Nip7Q9CXK8 180 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Rrs1Q9CYH6 365 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Actn3O88990 900 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Nlrp1aQ2LKU9 1182 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Gas2l3Q3UWW6 683 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Miga2Q8BK03 593 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Ulbp1Q8HWA3 334 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Vps33aQ9D2N9 598 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Clic4Q9QYB1 253 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Prl3d3A0A0M6L0J6 224 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Bicdl1A0JNT9 577 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Uri1Q3TLD5 531 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Ppp4r3aQ6P2K6 820 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Trim52Q8CDV4 233 aa12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Mrps25Q9D125 171 aaKnown RBP12.42□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Pramel3A2AHA7 463 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Gm7903A2AWL1 463 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 AV320801A2AWL3 467 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Gm15023L7MUB4 467 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Sult6b1P0CC03 303 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Gm21985Q6P6P5 1106 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Kiaa1524Q8BWY9 907 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Ptcd1Q8C2E4 695 aaKnown RBP12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Zbtb1Q91VL9 713 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Nav1Q8CH77 1875 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Cfap99A0A140LIX9 648 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Vps33bP59016 617 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Rtel1Q0VGM9 1203 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Kmt5bQ3U8K7 883 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 NfkbibQ60778 359 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Spty2d1Q68FG3 682 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Panx2Q6IMP4 677 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Cdca8Q8BHX3 289 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Mical1Q8VDP3 1048 aa12.41□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 CtcfQ61164 736 aaKnown RBP12.4□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Smarcc2Q6PDG5 1213 aa12.4□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Rbm17Q8JZX4 405 aaKnown RBP12.4□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Creld2Q9CYA0 350 aa12.4□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Traf1P39428 409 aa12.4□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Mns1Q61884 491 aa12.4□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 SdsQ8VBT2 327 aa12.4□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Arl8aQ8VEH3 186 aa12.4□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Stxbp4Q9WV89 557 aa12.4□□□□□ -0.42
Prpf40b-202ENSMUST00000118287 Zbtb21E9Q444 1094 aa12.4□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Rgs9O54828 675 aa12.4□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Ess2O70279 479 aa12.4□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Anp32eP97822 260 aaKnown RBP12.4□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 LyarQ08288 388 aaKnown RBP12.4□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Zbtb40Q6PCS8 1258 aa12.4□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 U2af1l4Q8BGJ9 220 aa12.4□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Taok3Q8BYC6 898 aa12.4□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Terf2ipQ91VL8 393 aa12.4□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Gigyf1Q99MR1 1044 aaKnown RBP12.4□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Drc7Q6V3W6 876 aa12.39□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Tmem67Q8BR76 992 aa12.39□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Spata32Q8C5V0 334 aa12.39□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Gnl2Q99LH1 728 aaKnown RBP12.39□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Abcb6Q9DC29 842 aa12.39□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 AatfQ9JKX4 526 aaKnown RBP12.39□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Cyp2d10P24456 504 aa12.39□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Kif2aP28740 705 aa12.39□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Atg9aQ68FE2 551 aa12.39□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Kcnq3Q8K3F6 873 aa12.39□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Tmc2Q8R4P4 888 aa12.39□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Stard3nlQ9DCI3 235 aa12.39□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Zfp597E9Q6S0 419 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms