RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 TrhQ62361 256 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Pdcl2Q78Y63 240 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Ddx27Q921N6 760 aaKnown RBP12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Nap1l5Q9JJF0 156 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 RereQ80TZ9 1558 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Atp1b3P97370 278 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Zscan22Q8BGS5 496 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Cyp4f39Q8BGU0 532 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Ccdc122Q8BVN0 290 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Pold4Q9CWP8 107 aa12.86□□□□□ -0.35
Trim9-202ENSMUST00000110522 Gng11P61953 73 aa12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 Fam228bQ497Q6 232 aa12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 Znf697Q569E7 569 aa12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 Cep135Q6P5D4 1140 aa12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 Trim52Q8CDV4 233 aa12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 GnaqP21279 359 aa12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 Cyp2d11P24457 504 aa12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 HmcesQ8R1M0 353 aaKnown RBP12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 Gse1Q3U3C9 1213 aa12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 Gm28047Q3US59 414 aa12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 CtcfQ61164 736 aaKnown RBP12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 Pcdhb5Q91XZ5 792 aa12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 Hip1rQ9JKY5 1068 aa12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 Cyp2ab1S4R196 498 aa12.85□□□□□ -0.35
Trim9-202ENSMUST00000110522 Cyp26a1O55127 497 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Atp6v1aP50516 617 aaKnown RBP12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 StrbpQ91WM1 672 aaKnown RBP12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Zscan25B2RX31 543 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Elmsan1E9Q2I4 1089 aaKnown RBP12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Calm1P0DP26 149 aaKnown RBP12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Calm2P0DP27 149 aaKnown RBP12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Calm3P0DP28 149 aaKnown RBP12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Ssrp1Q08943 708 aaKnown RBP12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Fam83bQ0VBM2 1012 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Zfp51Q3U4L8 781 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Xrcc4Q924T3 326 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Tab2Q99K90 693 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 MicalclQ9D5U9 680 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Col15a1O35206 1367 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Akap12Q9WTQ5 1684 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 GmnnO88513 206 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 IqcgQ80W32 419 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Luc7lQ9CYI4 371 aaKnown RBP12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Popdc2Q9ES82 367 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Simc1E9Q6E9 1354 aa12.84□□□□□ -0.35
Trim9-202ENSMUST00000110522 Clec11aO88200 328 aa12.83□□□□□ -0.35
Trim9-202ENSMUST00000110522 Ccdc162pQ0VG85 912 aa12.83□□□□□ -0.35
Trim9-202ENSMUST00000110522 Spag5Q7TME2 1165 aa12.83□□□□□ -0.35
Trim9-202ENSMUST00000110522 Zfp202Q8C879 641 aa12.83□□□□□ -0.35
Trim9-202ENSMUST00000110522 Emilin1Q99K41 1017 aa12.83□□□□□ -0.35
Trim9-202ENSMUST00000110522 SetQ9EQU5 289 aaKnown RBP12.83□□□□□ -0.35
Trim9-202ENSMUST00000110522 Kcnh3Q9WVJ0 1095 aa12.83□□□□□ -0.35
Trim9-202ENSMUST00000110522 Npc1l1Q6T3U4 1333 aa12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 Gjc1P28229 396 aa12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 Gzf1Q4VBD9 706 aa12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ift88Q61371 824 aa12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 Cc2d1bQ8BRN9 848 aa12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 Tcp11l1Q8BTG3 509 aa12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 Polr2dQ9D7M8 142 aaKnown RBP12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 AmfrQ9R049 643 aa12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 MypnQ5DTJ9 1315 aa12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 Large2Q5XPT3 690 aa12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 Asic1Q6NXK8 526 aa12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 Aox2Q5SGK3 1345 aa12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 Tecpr2Q3UH45 1423 aa12.83□□□□□ -0.36
Trim9-202ENSMUST00000110522 Spocd1B1ASB6 936 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Zbtb7aO88939 569 aaKnown RBP12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Clca2Q8BG22 942 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Atad2Q8CDM1 1040 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Hs2st1Q8R3H7 356 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Uchl5Q9WUP7 329 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Maats1Q8BRC6 783 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Nod2Q8K3Z0 1020 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Cul5Q9D5V5 780 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Cd274Q9EP73 290 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Adcy9P51830 1353 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Abca9Q8K449 1623 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Pcdhb9E9Q5G2 828 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Lipo1J3QME6 396 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Dok7Q18PE0 504 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Cacna2d4Q5RJF7 1116 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Tsg101Q61187 391 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Zrsr2Q62377 462 aaKnown RBP12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Sgsm1Q8BPQ7 1093 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 EngaseQ8BX80 734 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Hps4Q99KG7 671 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ftsj3Q9DBE9 838 aaKnown RBP12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Pkd2l2Q9JLG4 621 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Cyp2c23E9Q5K4 494 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Nfxl1E9Q8I7 918 aaKnown RBP12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Gm4340L7N2C4 268 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Tuft1O08970 390 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Map3k12Q60700 888 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Rnf34Q99KR6 376 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 Dip2aQ8BWT5 1523 aa12.82□□□□□ -0.36
Trim9-202ENSMUST00000110522 MthfslL7N466 203 aa12.81□□□□□ -0.36
Trim9-202ENSMUST00000110522 Nap1l2P51860 460 aa12.81□□□□□ -0.36
Trim9-202ENSMUST00000110522 Taok3Q8BYC6 898 aa12.81□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ssfa2Q922B9 1252 aa12.81□□□□□ -0.36
Trim9-202ENSMUST00000110522 Ddx10Q80Y44 875 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms