RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Oas2E9Q9A9 742 aa21.34■■□□□ 1.01
Trim47-202ENSMUST00000106441 Clec11aO88200 328 aa21.34■■□□□ 1.01
Trim47-202ENSMUST00000106441 Tmc2Q8R4P4 888 aa21.34■■□□□ 1.01
Trim47-202ENSMUST00000106441 Mrpl44Q9CY73 333 aaKnown RBP21.34■■□□□ 1.01
Trim47-202ENSMUST00000106441 1700029H14RikE9PY36 240 aa21.33■■□□□ 1.01
Trim47-202ENSMUST00000106441 Ms4a1P19437 291 aa21.33■■□□□ 1.01
Trim47-202ENSMUST00000106441 Gpr150Q8BL07 427 aa21.33■■□□□ 1.01
Trim47-202ENSMUST00000106441 Adarb2Q9JI20 745 aa21.33■■□□□ 1.01
Trim47-202ENSMUST00000106441 Plekho1Q9JIY0 408 aa21.33■■□□□ 1.01
Trim47-202ENSMUST00000106441 Bin2D3Z6Q9 489 aa21.33■■□□□ 1
Trim47-202ENSMUST00000106441 Ube4aE9Q735 1028 aa21.33■■□□□ 1
Trim47-202ENSMUST00000106441 Lnx1O70263 728 aa21.33■■□□□ 1
Trim47-202ENSMUST00000106441 Gja5Q01231 358 aa21.33■■□□□ 1
Trim47-202ENSMUST00000106441 Ptcd1Q8C2E4 695 aaKnown RBP21.33■■□□□ 1
Trim47-202ENSMUST00000106441 Mb21d2Q8C525 428 aa21.33■■□□□ 1
Trim47-202ENSMUST00000106441 Q8C6G1 249 aa21.33■■□□□ 1
Trim47-202ENSMUST00000106441 Ccdc158Q8CDI6 1109 aa21.33■■□□□ 1
Trim47-202ENSMUST00000106441 BrapQ99MP8 591 aa21.33■■□□□ 1
Trim47-202ENSMUST00000106441 Atp6v0a2P15920 856 aa21.32■■□□□ 1
Trim47-202ENSMUST00000106441 Kdm3aQ6PCM1 1323 aa21.32■■□□□ 1
Trim47-202ENSMUST00000106441 Cfap44E9Q5M6 1843 aa21.32■■□□□ 1
Trim47-202ENSMUST00000106441 Ccdc112A0AUP1 442 aa21.31■■□□□ 1
Trim47-202ENSMUST00000106441 Atp8a2P98200 1148 aa21.31■■□□□ 1
Trim47-202ENSMUST00000106441 Usp28Q5I043 1051 aa21.31■■□□□ 1
Trim47-202ENSMUST00000106441 Vps54Q5SPW0 977 aa21.31■■□□□ 1
Trim47-202ENSMUST00000106441 Ppm1fQ8CGA0 452 aa21.31■■□□□ 1
Trim47-202ENSMUST00000106441 Rbm17Q8JZX4 405 aaKnown RBP21.31■■□□□ 1
Trim47-202ENSMUST00000106441 Ifi35Q9D8C4 286 aa21.31■■□□□ 1
Trim47-202ENSMUST00000106441 Nxf2Q4ZGD8 691 aa21.31■■□□□ 1
Trim47-202ENSMUST00000106441 NfkbibQ60778 359 aa21.31■■□□□ 1
Trim47-202ENSMUST00000106441 Gm21985Q6P6P5 1106 aa21.31■■□□□ 1
Trim47-202ENSMUST00000106441 Slc39a11Q8BWY7 342 aa21.31■■□□□ 1
Trim47-202ENSMUST00000106441 Popdc2Q9ES82 367 aa21.31■■□□□ 1
Trim47-202ENSMUST00000106441 Lgr5Q9Z1P4 907 aa21.31■■□□□ 1
Trim47-202ENSMUST00000106441 Cfap70D3YVL2 1141 aa21.3■■□□□ 1
Trim47-202ENSMUST00000106441 Rps8P62242 208 aaKnown RBP21.3■■□□□ 1
Trim47-202ENSMUST00000106441 Ddx46Q569Z5 1032 aaKnown RBP21.3■■□□□ 1
Trim47-202ENSMUST00000106441 Zkscan8Q8BSL0 588 aa21.3■■□□□ 1
Trim47-202ENSMUST00000106441 Tango6Q8C3S2 1079 aa21.3■■□□□ 1
Trim47-202ENSMUST00000106441 Znrd1-asQ8R0E5 213 aa21.3■■□□□ 1
Trim47-202ENSMUST00000106441 BccipQ9CWI3 316 aa21.3■■□□□ 1
Trim47-202ENSMUST00000106441 Dydc2Q9D3X8 139 aa21.3■■□□□ 1
Trim47-202ENSMUST00000106441 Naa16Q9DBB4 864 aa21.3■■□□□ 1
Trim47-202ENSMUST00000106441 Ildr2B5TVM2 661 aa21.3■■□□□ 1
Trim47-202ENSMUST00000106441 Rrp1P56183 494 aaKnown RBP21.3■■□□□ 1
Trim47-202ENSMUST00000106441 Hook1Q8BIL5 728 aa21.3■■□□□ 1
Trim47-202ENSMUST00000106441 Sh3bp5Q9Z131 463 aa21.3■■□□□ 1
Trim47-202ENSMUST00000106441 Stx1aO35526 288 aa21.29■■□□□ 1
Trim47-202ENSMUST00000106441 Psd3Q2PFD7 1037 aa21.29■■□□□ 1
Trim47-202ENSMUST00000106441 Tsen34Q8BMZ5 316 aa21.29■■□□□ 1
Trim47-202ENSMUST00000106441 Rassf8Q8CJ96 419 aa21.29■■□□□ 1
Trim47-202ENSMUST00000106441 Trim59Q922Y2 403 aa21.29■■□□□ 1
Trim47-202ENSMUST00000106441 Kiaa0754Q69ZZ9 979 aa21.29■■□□□ 1
Trim47-202ENSMUST00000106441 McamQ8R2Y2 648 aaKnown RBP21.29■■□□□ 1
Trim47-202ENSMUST00000106441 Dnaaf4Q8R368 420 aa21.29■■□□□ 1
Trim47-202ENSMUST00000106441 CpvlQ9D3S9 478 aa21.29■■□□□ 1
Trim47-202ENSMUST00000106441 Prl7a2O54831 253 aa21.28■■□□□ 1
Trim47-202ENSMUST00000106441 Exosc10P56960 887 aaKnown RBP21.28■■□□□ 1
Trim47-202ENSMUST00000106441 Plbd2Q3TCN2 594 aa21.28■■□□□ 1
Trim47-202ENSMUST00000106441 Dnaaf2Q8BPI1 814 aa21.28■■□□□ 1
Trim47-202ENSMUST00000106441 IarsQ8BU30 1262 aa21.28■■□□□ 1
Trim47-202ENSMUST00000106441 Tmem143Q8VD26 458 aa21.28■■□□□ 1
Trim47-202ENSMUST00000106441 Map3k15A2AQW0 1331 aa21.28■■□□□ 1
Trim47-202ENSMUST00000106441 Col3a1P08121 1464 aa21.28■■□□□ 1
Trim47-202ENSMUST00000106441 Nfatc2ipO09130 412 aa21.27■■□□□ 1
Trim47-202ENSMUST00000106441 Gsdma2Q32M21 443 aa21.27■■□□□ 1
Trim47-202ENSMUST00000106441 Rufy2Q8R4C2 606 aa21.27■■□□□ 1
Trim47-202ENSMUST00000106441 Nrbp1Q99J45 535 aa21.27■■□□□ 1
Trim47-202ENSMUST00000106441 Syt10Q9R0N4 523 aa21.27■■□□□ 1
Trim47-202ENSMUST00000106441 Npc1l1Q6T3U4 1333 aa21.27■■□□□ 1
Trim47-202ENSMUST00000106441 Frmpd3A0A140LIW3 1774 aa21.27■■□□□ 1
Trim47-202ENSMUST00000106441 Tlcd1Q99JT6 247 aa21.27■■□□□ 1
Trim47-202ENSMUST00000106441 Rdm1Q9CQK3 281 aa21.27■■□□□ 1
Trim47-202ENSMUST00000106441 Nup188Q6ZQH8 1759 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Kansl3A2RSY1 903 aaKnown RBP21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Lmnb1P14733 588 aaKnown RBP21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Cyp2c67Q569X9 491 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Mctp2Q5RJH2 878 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Gpatch3Q8BIY1 525 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Ncaph2Q8BSP2 607 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Atad2Q8CDM1 1040 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Heg1E9Q7X6 1337 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Gpatch11Q3UFS4 262 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Fhdc1Q3ULZ2 1149 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Znf496Q5SXI5 585 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Ano10Q8BH79 659 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Fam102bQ8BQS4 339 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Fbxo3Q9DC63 480 aa21.26■□□□□ 0.99
Trim47-202ENSMUST00000106441 Itgb4A2A863 1818 aa21.25■□□□□ 0.99
Trim47-202ENSMUST00000106441 U2af2P26369 475 aaKnown RBP21.25■□□□□ 0.99
Trim47-202ENSMUST00000106441 IntuQ059U7 942 aa21.25■□□□□ 0.99
Trim47-202ENSMUST00000106441 Ano6Q6P9J9 911 aa21.25■□□□□ 0.99
Trim47-202ENSMUST00000106441 Ccz1Q8C1Y8 480 aa21.25■□□□□ 0.99
Trim47-202ENSMUST00000106441 Ints4Q8CIM8 964 aa21.25■□□□□ 0.99
Trim47-202ENSMUST00000106441 Scn11aQ9R053 1765 aa21.25■□□□□ 0.99
Trim47-202ENSMUST00000106441 Pde8bE9Q4S1 865 aa21.24■□□□□ 0.99
Trim47-202ENSMUST00000106441 ZyxQ62523 564 aa21.24■□□□□ 0.99
Trim47-202ENSMUST00000106441 Golim4Q8BXA1 655 aa21.24■□□□□ 0.99
Trim47-202ENSMUST00000106441 UvssaQ9D479 717 aa21.24■□□□□ 0.99
Trim47-202ENSMUST00000106441 Dok7Q18PE0 504 aa21.24■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms