RNA–Protein interactions for RNA: ENSMUST00000081170.8

Sgcb-201, Transcript of Beta-sarcoglycan, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sgcb, Length 3,786 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sgcb-201ENSMUST00000081170 Rassf2Q8BMS9 326 aa13.21□□□□□ -0.29
Sgcb-201ENSMUST00000081170 Edc3Q8K2D3 508 aaKnown RBP13.21□□□□□ -0.29
Sgcb-201ENSMUST00000081170 Thoc1Q8R3N6 657 aaKnown RBP13.21□□□□□ -0.29
Sgcb-201ENSMUST00000081170 ApobrQ8VBT6 942 aa13.21□□□□□ -0.29
Sgcb-201ENSMUST00000081170 Srgap2Q91Z67 1071 aa13.21□□□□□ -0.29
Sgcb-201ENSMUST00000081170 Lztr1Q9CQ33 837 aa13.21□□□□□ -0.29
Sgcb-201ENSMUST00000081170 Stambpl1Q76N33 436 aa13.21□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Atg3Q9CPX6 314 aa13.21□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Top1Q04750 767 aaKnown RBP13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 MaeaQ4VC33 396 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Tsga10Q6NY15 697 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Brd3Q8K2F0 726 aaKnown RBP13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Iqsec2Q5DU25 1478 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Rims2Q9EQZ7 1530 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Ccdc191J3QQ27 883 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Pa2g4P50580 394 aaKnown RBP13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 HelqQ2VPA6 1069 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Krt222Q8CCX5 294 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Pms1Q8K119 917 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Dnajc28Q8VCE1 385 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 BaatQ91X34 420 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 NagaQ9QWR8 415 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 IbtkQ6ZPR6 1352 aaKnown RBP13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Pla2g4aP47713 748 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Gja3Q64448 417 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Klhl10Q9D5V2 608 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Dot1lQ6XZL8 1540 aa13.2□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Sbno1Q689Z5 1390 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Gm21671G3UY31 267 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Akap2O54931 893 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Tab2Q99K90 693 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 SyncQ9EPM5 470 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Nrxn3Q6P9K9 1571 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Myo1eE9Q634 1107 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Myo1fP70248 1099 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Cct6aP80317 531 aaKnown RBP13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 PsapQ61207 557 aaKnown RBP13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Sh3gl3Q62421 347 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Dhx40Q6PE54 779 aaKnown RBP13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Skor1Q8BX46 964 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Cd209bQ8CJ91 325 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Erc1Q99MI1 1120 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Ift172Q6VH22 1749 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Slit3Q9WVB4 1523 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Col18a1P39061 1774 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Prim1P20664 417 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Ccdc82Q6PG04 518 aa13.19□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Myo3aQ8K3H5 1613 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Snap23O09044 210 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Stat1P42225 749 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 FanccP50652 591 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Ipo7Q9EPL8 1038 aaKnown RBP13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Phf8Q80TJ7 1023 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Lrrc1Q80VQ1 524 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Aox4Q3TYQ9 1336 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Arhgef28P97433 1693 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Gm28510A0A087WP28 240 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 TrdnE9Q9K5 693 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Tdo2P48776 406 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Lmod1Q8BVA4 595 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Zfp113Q8C689 439 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Ak2Q9WTP6 239 aa13.18□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Mdm2P23804 489 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 VeztQ3ZK22 780 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Krt39Q6IFX4 482 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Unc5clQ6R653 518 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Snx1Q9WV80 522 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Ppp1r12cQ3UMT1 782 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Specc1Q5SXY1 1067 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Wdr60Q8C761 999 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Armcx6Q8K3A6 301 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 MyripQ8K3I4 856 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Sec24cG3X972 1096 aaKnown RBP13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Csrnp1P59054 583 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Hand2Q61039 217 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Fam170aQ66LM6 333 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Ccdc38Q8CDN8 563 aa13.17□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Skint5A7XUY5 1461 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Scaf11E9PZM7 1456 aaKnown RBP13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Pafah1b1P63005 410 aaKnown RBP13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Serpinb1cQ5SV42 375 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Dpf2Q61103 391 aaKnown RBP13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Rbbp5Q8BX09 538 aaKnown RBP13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Tsnaxip1Q99P25 704 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Paip2Q9D6V8 124 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Rad50P70388 1312 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 DgkiD3YWQ0 1071 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 GopcQ8BH60 463 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Fam173bQ9D1Z3 247 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Fbf1A2A870 1173 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Hdhd2Q3UGR5 259 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Kiaa1524Q8BWY9 907 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Slc13a4Q8BZ82 625 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Mtmr3Q8K296 1196 aa13.16□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Tex35Q14BK3 207 aa13.15□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Stk38lQ7TSE6 464 aa13.15□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Slc26a8Q8R0C3 999 aa13.15□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Vps16Q920Q4 839 aa13.15□□□□□ -0.3
Sgcb-201ENSMUST00000081170 CactinQ9CS00 772 aaKnown RBP13.15□□□□□ -0.3
Sgcb-201ENSMUST00000081170 Spc24Q9D083 201 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms