RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Srgap1Q91Z69 1062 aa13.28□□□□□ -0.28
Vamp1-202ENSMUST00000063588 Ccdc47Q9D024 483 aaKnown RBP13.28□□□□□ -0.28
Vamp1-202ENSMUST00000063588 UvssaQ9D479 717 aa13.28□□□□□ -0.28
Vamp1-202ENSMUST00000063588 Mad1l1Q9WTX8 717 aaKnown RBP13.28□□□□□ -0.28
Vamp1-202ENSMUST00000063588 Slfn1Q9Z0I7 337 aa13.28□□□□□ -0.28
Vamp1-202ENSMUST00000063588 Sall1Q9ER74 1322 aa13.28□□□□□ -0.28
Vamp1-202ENSMUST00000063588 Dhx16G3X8X0 1044 aaKnown RBP13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Slc4a4O88343 1079 aa13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Celf1P28659 486 aaKnown RBP13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Esyt1Q3U7R1 1092 aaKnown RBP13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Gm5592Q3V0A6 857 aa13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Pim2Q62070 370 aa13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Cyp24a1Q64441 514 aa13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Rbm15bQ6PHZ5 887 aaKnown RBP13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Tmem59lQ7TNI2 337 aa13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Atxn2lQ7TQH0 1049 aaKnown RBP13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Rnf41Q8BH75 317 aa13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Paf1Q8K2T8 535 aa13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Ces1dQ8VCT4 565 aa13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Pla2g12bQ99P27 195 aa13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Tbc1d7Q9D0K0 293 aa13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Ambra1A2AH22 1300 aa13.27□□□□□ -0.29
Vamp1-202ENSMUST00000063588 MeiocA2AG06 965 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Vmn2r23E9PXI5 849 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Rgs9O54828 675 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Zbtb7aO88939 569 aaKnown RBP13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Cd3dP04235 173 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Ercc3P49135 783 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Cct2P80314 535 aaKnown RBP13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Bend4P86174 541 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Ppp1r21Q3TDD9 780 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Ccdc174Q3U155 467 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Spg7Q3ULF4 781 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Agtpbp1Q641K1 1218 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Nxf7Q80SZ6 620 aaKnown RBP13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 HlfQ8BW74 295 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Tpcn2Q8BWC0 731 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Nup88Q8CEC0 753 aaKnown RBP13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Eaf2Q91ZD6 262 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Stag1Q9D3E6 1258 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Aox3G3X982 1335 aa13.26□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Krt24A1L317 512 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Dennd3A2RT67 1274 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Lipo1J3QME6 396 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Pde6aP27664 859 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Siah1aP61092 282 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Kiaa0319Q5SZV5 1081 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Acap3Q6NXL5 833 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Mknk2Q8CDB0 459 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Plcd1Q8R3B1 756 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Slc14a2Q8R4T9 930 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 St5Q924W7 1134 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Pold4Q9CWP8 107 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Snapc4Q8BP86 1333 aa13.25□□□□□ -0.29
Vamp1-202ENSMUST00000063588 LyarQ08288 388 aaKnown RBP13.24□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Kif22Q3V300 660 aa13.24□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Cfap69Q8BH53 942 aa13.24□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Zfp317Q8C0Q5 607 aa13.24□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Mrpl12Q9DB15 201 aaKnown RBP13.24□□□□□ -0.29
Vamp1-202ENSMUST00000063588 PdcQ9QW08 244 aa13.24□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Krt85Q9Z2T6 507 aa13.24□□□□□ -0.29
Vamp1-202ENSMUST00000063588 CpdO89001 1377 aa13.24□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Gm20425E9Q035 978 aaKnown RBP13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Il4rP16382 810 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Cd22P35329 862 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Fbln2P37889 1221 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 SrprbP47758 269 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Cplx2P84086 134 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Psd3Q2PFD7 1037 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Cnnm3Q32NY4 713 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Pnpla6Q3TRM4 1355 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Q3TYL0 343 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Esyt2Q3TZZ7 845 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Cdkl5Q3UTQ8 938 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 NesQ6P5H2 1864 aaKnown RBP13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Mtmr3Q8K296 1196 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Kcnq3Q8K3F6 873 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Rbm5Q91YE7 815 aaKnown RBP13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Col20a1Q923P0 1320 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 DmtnQ9WV69 405 aa13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Rbm6S4R1W5 1118 aaKnown RBP13.23□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Rgs12Q8CGE9 1381 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Cfap99A0A140LIX9 648 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Syce3B5KM66 88 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Tlr8P58682 1032 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Ckap2Q3V1H1 664 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Tbc1d30Q69ZT9 766 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Casc1Q6TDU8 730 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Olfr118Q7TRJ6 321 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Zscan22Q8BGS5 496 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 WdpcpQ8C456 722 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Bola3Q8CEI1 110 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Sumf1Q8R0F3 372 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Cdc45Q9Z1X9 566 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Letm1Q9Z2I0 738 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Lamb1P02469 1786 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Mapkapk5O54992 473 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Atp6v0a2P15920 856 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Mtx1P47802 317 aa13.22□□□□□ -0.29
Vamp1-202ENSMUST00000063588 Csrnp1P59054 583 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms