RNA–Protein interactions for RNA: ENSMUST00000052708.6

Ckap2l-201, Transcript of Cytoskeleton-associated protein 2-like, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2l, Length 3,137 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2l-201ENSMUST00000052708 MthfsQ9D110 203 aa10.74□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 NrapQ80XB4 1728 aa10.74□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Usp42B2RQC2 1324 aaKnown RBP10.74□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Csrnp1P59054 583 aa10.74□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Ppp1r21Q3TDD9 780 aa10.74□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Cyp2c67Q569X9 491 aa10.74□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Cyp24a1Q64441 514 aa10.74□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Dmrtc1Q9D9R7 182 aa10.74□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Myoz2Q9JJW5 264 aa10.74□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Cyp2ab1S4R196 498 aa10.74□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Klrk1O54709 232 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 EvcP57680 1005 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Gjb2Q00977 226 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Atf7Q8R0S1 413 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Mrpl50Q8VDT9 159 aaKnown RBP10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Rbm10Q99KG3 930 aaKnown RBP10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Rufy3Q9D394 469 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Epb41l3Q9WV92 929 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Hmg20bQ9Z104 317 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Lekr1B2RVN1 116 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 AaasP58742 546 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Dynll1P63168 89 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 AnlnQ8K298 1121 aaKnown RBP10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Pold4Q9CWP8 107 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Ercc3P49135 783 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Acap3Q6NXL5 833 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Olfm5Q8BU90 496 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Plekhg6Q8R0J1 787 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Cxcl11Q9JHH5 100 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Aox3G3X982 1335 aa10.73□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Usp17lbE9Q9U0 468 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Nell2Q61220 819 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Gpr101Q80T62 511 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Trmt44Q9D2Q2 713 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 TicrrQ8BQ33 1889 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Prl7d1P04769 244 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 F2rP30558 430 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Atp6v1aP50516 617 aaKnown RBP10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Esyt2Q3TZZ7 845 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Atp2b4Q6Q477 1205 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Tmem179Q8BHH9 233 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Rps6kb1Q8BSK8 525 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 MlphQ91V27 590 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Taf1dQ9D4V4 322 aa10.72□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Prss40A6H6T1 365 aa10.71□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Phactr2B1AVP0 632 aa10.71□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Elmsan1E9Q2I4 1089 aaKnown RBP10.71□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 PnnO35691 725 aaKnown RBP10.71□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Rsph3aQ3UFY4 516 aa10.71□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Uba5Q8VE47 403 aa10.71□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Bap1Q99PU7 728 aa10.71□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Exosc10P56960 887 aaKnown RBP10.71□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Washc4Q3UMB9 1173 aa10.71□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 NsmfQ99NF2 532 aa10.71□□□□□ -0.69
Ckap2l-201ENSMUST00000052708 Spg7Q3ULF4 781 aa10.71□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Adam1bQ8R534 806 aa10.71□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Tbc1d7Q9D0K0 293 aa10.71□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Nfe2l3Q9WTM4 660 aa10.71□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Tgfb2P27090 414 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Kif22Q3V300 660 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Mxd3Q80US8 206 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Tmem67Q8BR76 992 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Camkk2Q8C078 588 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Tceanc2Q8R2M0 207 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Cd248Q91V98 765 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Eaf2Q91ZD6 262 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Rbm43Q99J64 343 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Rfx1P48377 963 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Hand2Q61039 217 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Tm4sf1Q64302 202 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Mboat7Q8CHK3 473 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 RarsQ9D0I9 660 aaKnown RBP10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Stag1Q9D3E6 1258 aa10.7□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Pald1P70261 859 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Cdcp1Q5U462 833 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 CbarpQ66L44 698 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Atad2Q8CDM1 1040 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Spata5Q3UMC0 893 aaKnown RBP10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Rnf20Q5DTM8 973 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Mknk2Q8CDB0 459 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Chmp4cQ9D7F7 232 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Ush1cQ9ES64 910 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 1700006A11RikB9EHI3 544 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Casp12O08736 419 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Slc4a4O88343 1079 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Rad23bP54728 416 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 SfswapQ3USH5 945 aaKnown RBP10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Mum1l1Q4VA55 681 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Mtmr2Q9Z2D1 643 aa10.69□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Cyp3a59D3Z2W7 503 aa10.68□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Ints3Q7TPD0 1041 aaKnown RBP10.68□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Ccdc158Q8CDI6 1109 aa10.68□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Txnrd3Q99MD6 652 aa10.68□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Gtf2iQ9ESZ8 998 aaKnown RBP10.68□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Ly6iQ9WU67 134 aa10.68□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Col20a1Q923P0 1320 aa10.68□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Hap1O35668 628 aa10.68□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Spty2d1Q68FG3 682 aa10.68□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 HelbQ6NVF4 1074 aa10.68□□□□□ -0.7
Ckap2l-201ENSMUST00000052708 Cfap69Q8BH53 942 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms