RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Sf3b3Q921M3 1217 aaKnown RBP23.56■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Lgr5Q9Z1P4 907 aa23.56■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Lnx1O70263 728 aa23.55■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Ces1dQ8VCT4 565 aa23.55■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Znf326O88291 580 aa23.55■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 IntuQ059U7 942 aa23.55■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Taok3Q8BYC6 898 aa23.55■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Pcdhb22Q91XZ8 794 aa23.55■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Sil1Q9EPK6 465 aa23.55■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Spata31d1bE9QA57 1361 aa23.55■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Cntnap1O54991 1385 aa23.55■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Krt24A1L317 512 aa23.54■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Cyp3a59D3Z2W7 503 aa23.54■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 4930523C07RikE9Q2T4 99 aa23.54■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Mcm3P25206 812 aaKnown RBP23.54■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 ErmnQ5EBJ4 281 aa23.54■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Odf2lQ9D478 642 aa23.54■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Zbtb43Q9DAI4 467 aa23.54■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Lipo1J3QME6 396 aa23.54■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Zbtb7aO88939 569 aaKnown RBP23.54■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Prdm1Q60636 856 aa23.54■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Myh2G3UW82 1942 aa23.54■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Duox1A2AQ92 1551 aa23.54■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Osbpl5Q9ER64 874 aa23.53■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Frmd7A2AD83 703 aa23.53■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Eaf2Q91ZD6 262 aa23.53■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 FAM186AQ9D9R9 1790 aa23.53■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 CoblQ5NBX1 1337 aaKnown RBP23.52■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 ParvgQ9ERD8 331 aa23.52■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Myh15E9Q264 1925 aa23.52■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Arhgap33Q80YF9 1305 aa23.52■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Nfatc2ipO09130 412 aa23.52■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 CrcpO35427 148 aa23.52■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Tbc1d30Q69ZT9 766 aa23.52■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Sept9Q80UG5 583 aa23.52■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Rbm42Q91V81 474 aaKnown RBP23.52■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 Zcrb1Q9CZ96 217 aaKnown RBP23.52■■□□□ 1.36
Ctdsp1-201ENSMUST00000027367 NapbP28663 298 aa23.51■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 TrhQ62361 256 aa23.51■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Nyap1Q6PFX7 833 aa23.51■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 HdlbpQ8VDJ3 1268 aaKnown RBP23.51■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Rbm43Q99J64 343 aa23.51■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 SrrtQ99MR6 875 aaKnown RBP23.51■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Eva1cP58659 440 aa23.51■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Zfp51Q3U4L8 781 aa23.51■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Irx4Q9QY61 515 aa23.51■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 PdcQ9QW08 244 aa23.5■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Kcnj4P52189 445 aa23.5■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Chd1lQ9CXF7 900 aa23.5■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Rbm33Q9CXK9 1231 aaKnown RBP23.5■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Cavin1O54724 392 aa23.5■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Csrnp1P59054 583 aa23.5■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Agtpbp1Q641K1 1218 aa23.5■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Ccdc82Q6PG04 518 aa23.5■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 U2af1l4Q8BGJ9 220 aa23.5■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Tpcn2Q8BWC0 731 aa23.5■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Terf2ipQ91VL8 393 aa23.5■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Sh3bp5lQ99LH9 392 aa23.5■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Myh4Q5SX39 1939 aa23.49■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Casp12O08736 419 aa23.49■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Fam170aQ66LM6 333 aa23.49■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 McamQ8R2Y2 648 aaKnown RBP23.49■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 RtcbQ99LF4 505 aaKnown RBP23.49■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Irs4Q9Z0Y7 1216 aa23.49■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Sall1Q9ER74 1322 aa23.49■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Dync1i1O88485 628 aa23.49■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Usp28Q5I043 1051 aa23.49■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Olfm5Q8BU90 496 aa23.49■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Pold4Q9CWP8 107 aa23.49■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Wdr19Q3UGF1 1341 aa23.48■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Izumo3A6PWV3 263 aa23.48■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Slc7a3P70423 618 aa23.48■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Krt84Q99M73 603 aa23.48■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Med23Q80YQ2 1367 aa23.48■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Slc4a4O88343 1079 aa23.48■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 U2af2P26369 475 aaKnown RBP23.48■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Pde6aP27664 859 aa23.48■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Sh3bp1P55194 680 aa23.48■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Celf1P28659 486 aaKnown RBP23.47■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Prl7d1P04769 244 aa23.47■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Rhbdl3P58873 404 aa23.47■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Siah1aP61092 282 aa23.47■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 LyarQ08288 388 aaKnown RBP23.47■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Cyp24a1Q64441 514 aa23.47■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Olfml1Q8BSH2 233 aa23.47■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Wdr33Q8K4P0 1330 aaKnown RBP23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Zfyve9A2A8R0 1397 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Ankrd63A2ARS0 390 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Stat5bP42232 786 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Bach2P97303 839 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Lins1Q3U1D0 764 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Mtmr3Q8K296 1196 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Bicd2Q921C5 820 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Naa16Q9DBB4 864 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Ubap1lG3UW59 384 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Cyp26a1O55127 497 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Myl10Q62082 202 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 DymQ8CHY3 669 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Serpina10Q8R121 448 aa23.46■■□□□ 1.35
Ctdsp1-201ENSMUST00000027367 Rps8P62242 208 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms