RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Ccdc91Q9D8L5 442 aa9.31□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Rad50P70388 1312 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 GalcP54818 684 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Ercc6l2Q9JIM3 1537 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Ano10Q8BH79 659 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Bcar3Q9QZK2 820 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Ahdc1Q6PAL7 1594 aaKnown RBP9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Zap70P43404 618 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Vps33bP59016 617 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Aplp1Q03157 653 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Depdc1bQ8BH88 529 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Ifih1Q8R5F7 1025 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Lmbr1lQ9D1E5 489 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Adgrl1Q80TR1 1466 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Rbbp8nlA2ABX0 614 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Mcm7Q61881 719 aaKnown RBP9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Zfp213E9QAW0 468 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Tbc1d9Q3UYK3 1264 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Ccdc148Q6P5U8 527 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Gtf2a1Q99PM3 378 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Kif17Q99PW8 1038 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Rdm1Q9CQK3 281 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 MeiocA2AG06 965 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Cep135Q6P5D4 1140 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Skida1Q80YR3 822 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Opa1P58281 960 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Nlrp2Q4PLS0 1046 aaKnown RBP9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 U2af1l4Q8BGJ9 220 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Actn2Q9JI91 894 aa9.3□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Prim1P20664 417 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Uspl1Q3ULM6 1089 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Fam83gQ5SWY7 812 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Tpcn1Q9EQJ0 817 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Gbp2Q9Z0E6 589 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Zkscan7E9PVW1 718 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Gm4758L7N258 96 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 DymQ8CHY3 669 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Grm8P47743 908 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Top1Q04750 767 aaKnown RBP9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Pym1Q8CHP5 203 aaKnown RBP9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Rtn1Q8K0T0 780 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Dbndd1Q9CZ00 160 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Ccdc89Q9DA73 370 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Gm32742A0A1B0GT42 1604 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Zbtb22Q9Z0G7 638 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Gng11P61953 73 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Adcy5P84309 1262 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Q3UPC7 1272 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Dcaf5Q80T85 946 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Cyp4f39Q8BGU0 532 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 2310002L09RikQ9D7L5 217 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Aox4Q3TYQ9 1336 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 A0A1W2P7S8 802 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Zbtb21E9Q444 1094 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Eif6O55135 245 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Tnnc1P19123 161 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Gsta4P24472 222 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Elf1Q60775 612 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Ctnna3Q65CL1 895 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Cdc5lQ6A068 802 aaKnown RBP9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Vps37cQ8R105 352 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Ddx24Q9ESV0 857 aaKnown RBP9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Mx1P09922 631 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 IntuQ059U7 942 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Sun3Q5SS91 320 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 GancQ8BVW0 898 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Atp2a1Q8R429 994 aa9.29□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Parp1P11103 1013 aaKnown RBP9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Tom1l2Q5SRX1 507 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Pcdhb5Q91XZ5 792 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Usp11Q99K46 921 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Tarbp1E9Q368 1579 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Spocd1B1ASB6 936 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 CltaO08585 235 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Map3k9Q3U1V8 1077 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Tcerg1lQ3B807 590 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Tekt3Q6X6Z7 490 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Prkag2Q91WG5 566 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Egfl6Q9JJZ5 550 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Diaph2O70566 1098 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Gipc1Q9Z0G0 333 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Atf7ipQ7TT18 1306 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Cops6O88545 324 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Rassf2Q8BMS9 326 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Eid1Q9DCR4 169 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Dpp7Q9ET22 506 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 AmfrQ9R049 643 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Atp6v1aP50516 617 aaKnown RBP9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Gas2l2Q5SSG4 860 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 SympkQ80X82 1284 aa9.28□□□□□ -0.92
Ssr1-201ENSMUST00000021864 AceP09470 1312 aa9.27□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Lmod1Q8BVA4 595 aa9.27□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Slc39a6Q8C145 765 aa9.27□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Klhl30Q8C3F7 581 aa9.27□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Ivns1abpQ920Q8 642 aa9.27□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Naa16Q9DBB4 864 aa9.27□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Fam177a1Q8BR63 207 aa9.27□□□□□ -0.92
Ssr1-201ENSMUST00000021864 Pik3ap1Q9EQ32 811 aa9.27□□□□□ -0.92
Ssr1-201ENSMUST00000021864 4930407I10RikD3Z5T8 1512 aa9.27□□□□□ -0.93
Ssr1-201ENSMUST00000021864 S100bP50114 92 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms