RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Gnl3lQ6PGG6 577 aaKnown RBP13.21□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Unc5clQ6R653 518 aa13.21□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Osbpl1aQ91XL9 950 aa13.21□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Pcdhb15Q91Y04 786 aa13.21□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Brwd3A2AHJ4 1799 aa13.21□□□□□ -0.3
Sdc1-201ENSMUST00000020911 GpkowQ56A08 488 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Tab3Q571K4 716 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Il1rapl2Q9ERS6 686 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Nid2O88322 1403 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Zscan20B2KFW1 1030 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Trim30cD3YVI9 513 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 NpcdF8VQB8 469 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Gjb2Q00977 226 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Ints3Q7TPD0 1041 aaKnown RBP13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Slc26a8Q8R0C3 999 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Mical1Q8VDP3 1048 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Rab3il1Q8VDV3 383 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Ccdc39Q9D5Y1 937 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Mlh1Q9JK91 760 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Jakmip2D3YXK0 820 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 RcvrnP34057 202 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Cct4P80315 539 aaKnown RBP13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Gucy2cQ3UWA6 1072 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Sgsm2Q80U12 1005 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 4930504O13RikQ8C5Z9 145 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Gps2Q921N8 327 aa13.2□□□□□ -0.3
Sdc1-201ENSMUST00000020911 A0A0U1RNP2 1173 aa13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Kifap3P70188 793 aa13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Iqsec3Q3TES0 1195 aa13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Soga3Q6NZL0 945 aa13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Tmem119Q8R138 280 aa13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Pes1Q9EQ61 584 aaKnown RBP13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Atp10bB1AWN4 1474 aa13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Sema3fO88632 785 aa13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Gng11P61953 73 aa13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Fam107bQ3TGF2 131 aa13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 NaspQ99MD9 773 aaKnown RBP13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 LratQ9JI60 231 aa13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Kank3Q9Z1P7 791 aa13.19□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Tdo2P48776 406 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Phactr4Q501J7 694 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Luzp1Q8R4U7 1068 aaKnown RBP13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Chmp3Q9CQ10 224 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Chchd3Q9CRB9 227 aaKnown RBP13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 PdclQ9DBX2 301 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Osbpl5Q9ER64 874 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 ErmapQ9JLN5 566 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Dlg5E9Q9R9 1921 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Eif3aP23116 1344 aaKnown RBP13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Robo1O89026 1612 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Mdh1P14152 334 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 ItpripQ3TNL8 555 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Q8C5K5 320 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Armc9Q9D2I5 817 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Xpo4Q9ESJ0 1151 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Syt1P46096 421 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Hdgfl1Q2VPR5 283 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Adora1Q60612 326 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Brsk2Q69Z98 735 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 LnpkQ7TQ95 425 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Dhx38Q80X98 1228 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Ccdc7Q9D541 371 aa13.18□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Flt4P35917 1363 aa13.17□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Rb1P13405 921 aa13.17□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Tex11Q14AT2 947 aa13.17□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Tbc1d1Q60949 1255 aa13.17□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Fkbp5Q64378 456 aa13.17□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Ppp4r3bQ922R5 820 aa13.17□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Dhx40Q6PE54 779 aaKnown RBP13.17□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Prkag3Q8BGM7 489 aa13.17□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Q8C1R3 189 aa13.17□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Golph3lQ8R088 285 aaKnown RBP13.17□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Riok3Q9DBU3 519 aaKnown RBP13.17□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Plekhd1B2RPU2 505 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Cacna2d1O08532 1103 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Mnat1P51949 309 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Igflr1Q3U4N7 345 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Jakmip3Q5DTN8 844 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Bmp2kQ91Z96 1138 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Tnip1Q9WUU8 647 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Rsrc2A2RTL5 376 aaKnown RBP13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Akap2O54931 893 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Cct2P80314 535 aaKnown RBP13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Brinp3Q499E0 766 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Map3k11Q80XI6 850 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Naa25Q8BWZ3 972 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Tbc1d7Q9D0K0 293 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Ccdc121E9Q6D3 323 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Rnf40Q3U319 1001 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 BcanQ61361 883 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Pde1cQ64338 706 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 TxlnaQ6PAM1 554 aaKnown RBP13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Mkrn1Q9QXP6 481 aa13.16□□□□□ -0.3
Sdc1-201ENSMUST00000020911 FosbP13346 338 aa13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Nol8Q3UHX0 1147 aaKnown RBP13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Adam1aQ60813 791 aa13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Bank1Q80VH0 783 aa13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Hook1Q8BIL5 728 aa13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Trap1Q9CQN1 706 aaKnown RBP13.15□□□□□ -0.3
Sdc1-201ENSMUST00000020911 Mybl1P51960 751 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms