RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 OR10P1Q8NGE3 313 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 KLF14Q8TD94 323 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-233ENST00000642021 ARRDC1-AS1Q9H2J1 176 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 OBP2BQ9NPH6 170 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 SH3BGRL2Q9UJC5 107 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 KLF13Q9Y2Y9 288 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-233ENST00000642021 IQCF6A8MYZ5 107 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 TMEM250H0YL14 139 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 P2RY6Q15077 328 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 GCSAMLQ5JQS6 135 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 C2orf88Q9BSF0 95 aa11.56□□□□□ -0.56
PHGDH-233ENST00000642021 TRGV5A0A0B4J1U4 118 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 C21orf140B9A014 251 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 H7BYZ3 331 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 AMBPP02760 352 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 BMP5P22003 454 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 GABRA2P47869 451 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 TMPRSS7Q7RTY8 843 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 TMEM183AQ8IXX5 376 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 Q8N7P7 452 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 ZBTB34Q8NCN2 500 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 DCTN5Q9BTE1 182 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 CFAP47Q6ZTR5 3102 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 A0A1W2PPQ1 181 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 RBMXL2O75526 392 aaKnown RBP11.55□□□□□ -0.56
PHGDH-233ENST00000642021 EGR1P18146 543 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 ATP6V1FQ16864 119 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 PRAMEF6Q5VXH4 476 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 OR5T1Q8NG75 326 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 PLPPR2Q96GM1 343 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 FZR1Q9UM11 496 aa11.55□□□□□ -0.56
PHGDH-233ENST00000642021 SMCO3A2RU48 225 aa11.54□□□□□ -0.56
PHGDH-233ENST00000642021 OOEPA6NGQ2 149 aa11.54□□□□□ -0.56
PHGDH-233ENST00000642021 AGFG2O95081 481 aa11.54□□□□□ -0.56
PHGDH-233ENST00000642021 UBE2NP61088 152 aaKnown RBP11.54□□□□□ -0.56
PHGDH-233ENST00000642021 MRPL49Q13405 166 aaKnown RBP11.54□□□□□ -0.56
PHGDH-233ENST00000642021 SLC35E4Q6ICL7 350 aa11.54□□□□□ -0.56
PHGDH-233ENST00000642021 ZNF66Q6ZN08 573 aa11.54□□□□□ -0.56
PHGDH-233ENST00000642021 OR13A1Q8NGR1 328 aa11.54□□□□□ -0.56
PHGDH-233ENST00000642021 ACTR3CQ9C0K3 210 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-233ENST00000642021 AURKAIP1Q9NWT8 199 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-233ENST00000642021 LNP1A1A4G5 178 aa11.54□□□□□ -0.56
PHGDH-233ENST00000642021 CLDN14O95500 239 aa11.54□□□□□ -0.56
PHGDH-233ENST00000642021 COX5AP20674 150 aa11.54□□□□□ -0.56
PHGDH-233ENST00000642021 H2BFWTQ7Z2G1 175 aa11.54□□□□□ -0.56
PHGDH-233ENST00000642021 J3QW42 95 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 RAB29O14966 203 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 PROP1O75360 226 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 GYPAP02724 150 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 GZMBP10144 247 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 MPLP40238 635 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 CATR1Q13166 79 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 TMEM164Q5U3C3 297 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 OR1P1Q8NH06 330 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 TMEM37Q8WXS4 190 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 TECTAO75443 2155 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 XKRY2A2RUG3 117 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 A6NJY4 79 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 PPP5D1E7EU14 171 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 CRYAAP02489 173 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 USF2Q15853 346 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-233ENST00000642021 LTC4SQ16873 150 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 VWC2Q2TAL6 325 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 ACP7Q6ZNF0 438 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 NINJ1Q92982 152 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 QTRT1Q9BXR0 403 aaKnown RBP11.53□□□□□ -0.56
PHGDH-233ENST00000642021 PSG11Q9UQ72 335 aa11.53□□□□□ -0.56
PHGDH-233ENST00000642021 TRAV38-1A0A0B4J264 116 aa11.52□□□□□ -0.56
PHGDH-233ENST00000642021 C15orf62A8K5M9 175 aa11.52□□□□□ -0.56
PHGDH-233ENST00000642021 DDTP30046 118 aa11.52□□□□□ -0.56
PHGDH-233ENST00000642021 ARG2P78540 354 aa11.52□□□□□ -0.56
PHGDH-233ENST00000642021 GABRA6Q16445 453 aa11.52□□□□□ -0.56
PHGDH-233ENST00000642021 ETFRF1Q6IPR1 90 aa11.52□□□□□ -0.56
PHGDH-233ENST00000642021 WDR82Q6UXN9 313 aa11.52□□□□□ -0.56
PHGDH-233ENST00000642021 OR5B12Q96R08 314 aa11.52□□□□□ -0.56
PHGDH-233ENST00000642021 MSL2Q9HCI7 577 aa11.52□□□□□ -0.56
PHGDH-233ENST00000642021 TMEM210A6NLX4 147 aa11.52□□□□□ -0.57
PHGDH-233ENST00000642021 HRASP01112 189 aa11.52□□□□□ -0.57
PHGDH-233ENST00000642021 OR9G9P0C7N8 305 aa11.52□□□□□ -0.57
PHGDH-233ENST00000642021 CD46P15529 392 aa11.52□□□□□ -0.57
PHGDH-233ENST00000642021 COL8A2P25067 703 aa11.52□□□□□ -0.57
PHGDH-233ENST00000642021 FAM3BP58499 235 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-233ENST00000642021 PKIAP61925 76 aa11.52□□□□□ -0.57
PHGDH-233ENST00000642021 NUTF2P61970 127 aaKnown RBP11.52□□□□□ -0.57
PHGDH-233ENST00000642021 FOXF2Q12947 444 aa11.52□□□□□ -0.57
PHGDH-233ENST00000642021 JOSD1Q15040 202 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-233ENST00000642021 LBHQ53QV2 105 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-233ENST00000642021 DNLZQ5SXM8 178 aa11.52□□□□□ -0.57
PHGDH-233ENST00000642021 TGIF2LYQ8IUE0 185 aa11.52□□□□□ -0.57
PHGDH-233ENST00000642021 NEIL1Q96FI4 390 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-233ENST00000642021 MANBALQ9NQG1 85 aa11.52□□□□□ -0.57
PHGDH-233ENST00000642021 FUT9Q9Y231 359 aa11.52□□□□□ -0.57
PHGDH-233ENST00000642021 TP53TG5Q9Y2B4 290 aa11.52□□□□□ -0.57
PHGDH-233ENST00000642021 C11orf94C9JXX5 98 aa11.51□□□□□ -0.57
PHGDH-233ENST00000642021 CHRNA7P36544 502 aa11.51□□□□□ -0.57
PHGDH-233ENST00000642021 UBE2G2P60604 165 aa11.51□□□□□ -0.57
PHGDH-233ENST00000642021 GNB2P62879 340 aa11.51□□□□□ -0.57
PHGDH-233ENST00000642021 ZNF709Q8N972 641 aa11.51□□□□□ -0.57
PHGDH-233ENST00000642021 GMPPAQ96IJ6 420 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-233ENST00000642021 DERL1Q9BUN8 251 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms