RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 HRNRQ86YZ3 2850 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-216ENST00000641375 TRBV23-1A0A0A0MS06 115 aa13.52□□□□□ -0.24
PHGDH-216ENST00000641375 FAM90A26D6RGX4 464 aa13.52□□□□□ -0.24
PHGDH-216ENST00000641375 GPR37O15354 613 aa13.52□□□□□ -0.24
PHGDH-216ENST00000641375 RBFOX2O43251 390 aaKnown RBP eCLIP13.52□□□□□ -0.247e-8■■□□□ 12.4
PHGDH-216ENST00000641375 CAV2P51636 162 aa13.52□□□□□ -0.24
PHGDH-216ENST00000641375 RPL39P5Q59GN2 51 aa13.52□□□□□ -0.24
PHGDH-216ENST00000641375 NCR3LG1Q68D85 454 aa13.52□□□□□ -0.24
PHGDH-216ENST00000641375 DHRS7BQ6IAN0 325 aaPredicted RBP13.52□□□□□ -0.24
PHGDH-216ENST00000641375 SLC25A48Q6ZT89 311 aaKnown RBP13.52□□□□□ -0.24
PHGDH-216ENST00000641375 RAB40CQ96S21 281 aa13.52□□□□□ -0.24
PHGDH-216ENST00000641375 DOCK11Q5JSL3 2073 aa13.52□□□□□ -0.25
PHGDH-216ENST00000641375 CHST1O43916 411 aa13.52□□□□□ -0.25
PHGDH-216ENST00000641375 MMP23AO75900 390 aa13.52□□□□□ -0.25
PHGDH-216ENST00000641375 HPRT1P00492 218 aa13.52□□□□□ -0.25
PHGDH-216ENST00000641375 G6PCP35575 357 aa13.52□□□□□ -0.25
PHGDH-216ENST00000641375 SVBPQ8N300 66 aa13.52□□□□□ -0.25
PHGDH-216ENST00000641375 BPIFCQ8NFQ6 507 aa13.52□□□□□ -0.25
PHGDH-216ENST00000641375 TIMD4Q96H15 378 aa13.52□□□□□ -0.25
PHGDH-216ENST00000641375 SAA2-SAA4A0A096LPE2 208 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 KIAA1324LA8MWY0 1029 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-216ENST00000641375 TEX46H3BTG2 121 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 P0C879 139 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 SAA2P0DJI9 122 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-216ENST00000641375 CCL3L1P16619 93 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 IZUMO4Q1ZYL8 232 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 EIF5AL1Q6IS14 154 aaKnown RBP13.51□□□□□ -0.25
PHGDH-216ENST00000641375 LYG1Q8N1E2 194 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 ADTRPQ96IZ2 230 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 S1PR3Q99500 378 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 RALYQ9UKM9 306 aaKnown RBP13.51□□□□□ -0.25
PHGDH-216ENST00000641375 A0A1W2PPE3 182 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 C19orf84I3L1E1 186 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 FCGR3BO75015 233 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 NXPH3O95157 252 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 GNG10P50151 68 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 ARHGDIBP52566 201 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 EWSR1Q01844 656 aaKnown RBP eCLIP13.51□□□□□ -0.25
PHGDH-216ENST00000641375 UTF1Q5T230 341 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 RPL7L1Q6DKI1 246 aaKnown RBP13.51□□□□□ -0.25
PHGDH-216ENST00000641375 H2BFWTQ7Z2G1 175 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 ODF3L1Q8IXM7 274 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 RAB1CQ92928 201 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 WSB1Q9Y6I7 421 aa13.51□□□□□ -0.25
PHGDH-216ENST00000641375 MARCH11A6NNE9 402 aa13.5□□□□□ -0.25
PHGDH-216ENST00000641375 SYNGR2O43760 224 aa13.5□□□□□ -0.25
PHGDH-216ENST00000641375 THBS3P49746 956 aa13.5□□□□□ -0.25
PHGDH-216ENST00000641375 LINC00205P59089 165 aa13.5□□□□□ -0.25
PHGDH-216ENST00000641375 RPL23AP62750 156 aaKnown RBP13.5□□□□□ -0.25
PHGDH-216ENST00000641375 BAXQ07812 192 aa13.5□□□□□ -0.25
PHGDH-216ENST00000641375 AVPI1Q5T686 147 aa13.5□□□□□ -0.25
PHGDH-216ENST00000641375 UBAC2Q8NBM4 344 aa13.5□□□□□ -0.25
PHGDH-216ENST00000641375 BARX1Q9HBU1 254 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-216ENST00000641375 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-216ENST00000641375 MIOXQ9UGB7 285 aa13.5□□□□□ -0.25
PHGDH-216ENST00000641375 BORCS7-ASMTA0A0B4J1R7 106 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 FAM24AA6NFZ4 105 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 TMEM155Q4W5P6 130 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 TMEM252Q8N6L7 170 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 SMIM3Q9BZL3 60 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 A0A1W2PPR1 153 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 A6NNC1 897 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 NDUFS6O75380 124 aaKnown RBP13.49□□□□□ -0.25
PHGDH-216ENST00000641375 NHLH2Q02577 135 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 FAM74A1Q5RGS3 127 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 C8orf31Q8N9H6 132 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 OR4S2Q8NH73 311 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 DDB2Q92466 427 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 R3HDM4Q96D70 268 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 TSNAXQ99598 290 aaKnown RBP13.49□□□□□ -0.25
PHGDH-216ENST00000641375 TCEAL7Q9BRU2 100 aa13.49□□□□□ -0.25
PHGDH-216ENST00000641375 A0A1W2PPH5 198 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 FAM90A9PA6NNJ1 464 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 MED6O75586 246 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 GOSR1O95249 250 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 TMEM50AO95807 157 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 SPP1P10451 314 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 ZNF841Q6ZN19 808 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 OR8B3Q8NGG8 313 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 OR8B2Q96RD0 313 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 CHODLQ9H9P2 273 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 UBTD1Q9HAC8 227 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 PPIHO43447 177 aaKnown RBP13.48□□□□□ -0.25
PHGDH-216ENST00000641375 PAX9P55771 341 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 DLX6P56179 175 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 TAS2R30P59541 319 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 TNFRSF9Q07011 255 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 MIDNQ504T8 468 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 CLEC9AQ6UXN8 241 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 C1orf229Q6ZS94 237 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-216ENST00000641375 PUSL1Q8N0Z8 303 aaKnown RBP13.48□□□□□ -0.25
PHGDH-216ENST00000641375 RNF141Q8WVD5 230 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 TMED6Q8WW62 240 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 HSPB7Q9UBY9 170 aa13.48□□□□□ -0.25
PHGDH-216ENST00000641375 IGSF23A1L1A6 192 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 RAB19A4D1S5 217 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 NQO2P16083 231 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 UBE2KP61086 200 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 ERVK-16P61578 105 aa13.47□□□□□ -0.25
PHGDH-216ENST00000641375 ZNF266Q14584 549 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms