RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 IGLV2-23P01705 113 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 IGKV1-16P04430 117 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 IGKV1D-39P04432 117 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 RLN1P04808 185 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 P0C879 139 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 RRASP10301 218 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 ANXA7P20073 488 aaKnown RBP7.3□□□□□ -1.24
SCARB2-225ENST00000640900 PAX6P26367 422 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 IER3P46695 156 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 PPP1R1AQ13522 171 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 TMEM187Q14656 261 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 LRRC75BQ2VPJ9 315 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 PLET1Q6UQ28 207 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 IL17RELQ6ZVW7 336 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 TMEM86BQ8N661 226 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 LRTM2Q8N967 370 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 CD300LFQ8TDQ1 290 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 CAPSLQ8WWF8 208 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 MS4A7Q9GZW8 240 aaPredicted RBP7.3□□□□□ -1.24
SCARB2-225ENST00000640900 TMEM222Q9H0R3 208 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 PLEKHA2Q9HB19 425 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 WASHC3Q9Y3C0 194 aa7.3□□□□□ -1.24
SCARB2-225ENST00000640900 TRAV6A0A075B6T7 132 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 A0A0B4J2A0 478 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 TEX13DA0A0J9YY54 714 aaPredicted RBP7.29□□□□□ -1.24
SCARB2-225ENST00000640900 C3orf85A0A1B0GTC6 90 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 MDFIC2A0A1B0GVS7 189 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 C9orf170A2RU37 121 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 A6NDX4 124 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 SRRM4A7MD48 611 aaKnown RBP7.29□□□□□ -1.24
SCARB2-225ENST00000640900 INMT-MINDY4F8WBC2 141 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 CLDN34H7C241 214 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 RAMP3O60896 148 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 SFT2D2O95562 160 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 DUS4LO95620 317 aaKnown RBP7.29□□□□□ -1.24
SCARB2-225ENST00000640900 CRYGBP07316 175 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 OR4E1P0C645 316 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 FAM157CP0CG43 387 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 RPA2P15927 270 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 S100GP29377 79 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 BRS3P32247 399 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 RAB13P51153 203 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 CATR1Q13166 79 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 DHRS2Q13268 280 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 MRGPRG-AS1Q2M3A8 158 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 ABCA11PQ4W5N1 156 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 GLDNQ6ZMI3 551 aaPredicted RBP7.29□□□□□ -1.24
SCARB2-225ENST00000640900 LYG2Q86SG7 212 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 MOB3BQ86TA1 216 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 SGPP2Q8IWX5 399 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 NPBQ8NG41 125 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 OR51H1Q8NH63 302 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 LHFPL5Q8TAF8 219 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 MITD1Q8WV92 249 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 IL22RA2Q969J5 263 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 EAF1Q96JC9 268 aaPredicted RBP7.29□□□□□ -1.24
SCARB2-225ENST00000640900 RITA1Q96K30 269 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 SSX3Q99909 188 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 BEX2Q9BXY8 128 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 SLC35D1Q9NTN3 355 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 LIN7CQ9NUP9 197 aaKnown RBP7.29□□□□□ -1.24
SCARB2-225ENST00000640900 COMMD9Q9P000 198 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 SHPKQ9UHJ6 478 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 PRELID3BQ9Y3B1 194 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 FAM96BQ9Y3D0 163 aa7.29□□□□□ -1.24
SCARB2-225ENST00000640900 TNCP24821 2201 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 IGHV3-72A0A0B4J1Y9 119 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 A6NJY4 79 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 DBX1A6NMT0 343 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 SNRPGP15A8MWD9 76 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 PRAF2O60831 178 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 NDUFA3O95167 84 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 HPRT1P00492 218 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 MOSP00540 346 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 IFNA2P01563 188 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 FGF2P09038 288 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 OR5AC1P0C628 307 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 AKR1C4P17516 323 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 SRD5A1P18405 259 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 SRP14P37108 136 aaKnown RBP7.28□□□□□ -1.24
SCARB2-225ENST00000640900 LGALS7P47929 136 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 ARHGDIBP52566 201 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 SCGB2A2Q13296 93 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 RTL8BQ17RB0 113 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 ANKRD55Q3KP44 614 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 Q71RC1 249 aaPredicted RBP7.28□□□□□ -1.24
SCARB2-225ENST00000640900 TMED4Q7Z7H5 227 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 SPAG16Q8N0X2 631 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 SIGLECL1Q8N7X8 197 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 OR8H1Q8NGG4 311 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 OR4C13Q8NGP0 309 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 OR4S2Q8NH73 311 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 OR5R1Q8NH85 324 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 OSR1Q8TAX0 266 aaPredicted RBP7.28□□□□□ -1.24
SCARB2-225ENST00000640900 TCTEX1D2Q8WW35 142 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 SSMEM1Q8WWF3 244 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 C22orf15Q8WYQ4 148 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 RBMXL1Q96E39 390 aaKnown RBP7.28□□□□□ -1.24
SCARB2-225ENST00000640900 SEC22AQ96IW7 307 aa7.28□□□□□ -1.24
SCARB2-225ENST00000640900 TCF19Q9Y242 345 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms