RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ZNF788Q6ZQV5 615 aa17.78■□□□□ 0.44
CLN6-224ENST00000638076 C1orf229Q6ZS94 237 aaPredicted RBP17.78■□□□□ 0.44
CLN6-224ENST00000638076 KDF1Q8NAX2 398 aaPredicted RBP17.78■□□□□ 0.44
CLN6-224ENST00000638076 SMG1Q96Q15 3661 aaKnown RBP17.78■□□□□ 0.44
CLN6-224ENST00000638076 SCAF4O95104 1147 aaKnown RBP17.77■□□□□ 0.44
CLN6-224ENST00000638076 RPS16P62249 146 aaKnown RBP17.77■□□□□ 0.44
CLN6-224ENST00000638076 ZNF726P1Q15940 193 aa17.77■□□□□ 0.44
CLN6-224ENST00000638076 TCF23Q7RTU1 214 aa17.77■□□□□ 0.44
CLN6-224ENST00000638076 ZCCHC24Q8N2G6 241 aaKnown RBP17.77■□□□□ 0.44
CLN6-224ENST00000638076 CLCC1Q96S66 551 aa17.77■□□□□ 0.44
CLN6-224ENST00000638076 TSPAN9O75954 239 aa17.77■□□□□ 0.43
CLN6-224ENST00000638076 RAB7AP51149 207 aa17.77■□□□□ 0.43
CLN6-224ENST00000638076 HNF4GQ14541 408 aa17.77■□□□□ 0.43
CLN6-224ENST00000638076 CT45A1Q5HYN5 189 aa17.77■□□□□ 0.43
CLN6-224ENST00000638076 ZNF506Q5JVG8 444 aa17.77■□□□□ 0.43
CLN6-224ENST00000638076 TEX36Q5VZQ5 186 aa17.77■□□□□ 0.43
CLN6-224ENST00000638076 OR10P1Q8NGE3 313 aa17.77■□□□□ 0.43
CLN6-224ENST00000638076 CT45A3Q8NHU0 189 aa17.77■□□□□ 0.43
CLN6-224ENST00000638076 RXFP4Q8TDU9 374 aa17.77■□□□□ 0.43
CLN6-224ENST00000638076 S1PR3Q99500 378 aa17.77■□□□□ 0.43
CLN6-224ENST00000638076 PRELID3BQ9Y3B1 194 aa17.77■□□□□ 0.43
CLN6-224ENST00000638076 RAI1Q7Z5J4 1906 aaPredicted RBP17.77■□□□□ 0.43
CLN6-224ENST00000638076 ITGB1BP1O14713 200 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 SRP19P09132 144 aaKnown RBP17.76■□□□□ 0.43
CLN6-224ENST00000638076 FAM87AP0C7U9 286 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 TNFRSF1AP19438 455 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 ELLP55199 621 aaPredicted RBP17.76■□□□□ 0.43
CLN6-224ENST00000638076 ATP6V1FQ16864 119 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 SSX7Q7RTT5 188 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 VKORC1L1Q8N0U8 176 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 COLCA2A8K830 154 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 C17orf100A8MU93 164 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 CEBPGP53567 150 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 TMEM41BQ5BJD5 291 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 PRAMEF5Q5TYX0 476 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 ADAM5Q6NVV9 412 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 LCN15Q6UWW0 184 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 PINX1Q96BK5 328 aaKnown RBP17.76■□□□□ 0.43
CLN6-224ENST00000638076 TMEM147Q9BVK8 224 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 MLXQ9UH92 298 aa17.76■□□□□ 0.43
CLN6-224ENST00000638076 DYSFO75923 2080 aa17.75■□□□□ 0.43
CLN6-224ENST00000638076 RBFOX2O43251 390 aaKnown RBP eCLIP17.75■□□□□ 0.43
CLN6-224ENST00000638076 IFNA17P01571 189 aa17.75■□□□□ 0.43
CLN6-224ENST00000638076 HSPB1P04792 205 aaKnown RBP17.75■□□□□ 0.43
CLN6-224ENST00000638076 FBP1P09467 338 aa17.75■□□□□ 0.43
CLN6-224ENST00000638076 FLI1Q01543 452 aaPredicted RBP17.75■□□□□ 0.43
CLN6-224ENST00000638076 ZNF787Q6DD87 383 aa17.75■□□□□ 0.43
CLN6-224ENST00000638076 RCC1LQ96I51 464 aaKnown RBP17.75■□□□□ 0.43
CLN6-224ENST00000638076 GAB2Q9UQC2 676 aa17.75■□□□□ 0.43
CLN6-224ENST00000638076 PUS1Q9Y606 427 aaKnown RBP eCLIP17.75■□□□□ 0.43
CLN6-224ENST00000638076 DOCK11Q5JSL3 2073 aa17.75■□□□□ 0.43
CLN6-224ENST00000638076 ATXN7O15265 892 aaPredicted RBP17.75■□□□□ 0.43
CLN6-224ENST00000638076 DAOP14920 347 aa17.75■□□□□ 0.43
CLN6-224ENST00000638076 MBD3L1Q8WWY6 194 aa17.75■□□□□ 0.43
CLN6-224ENST00000638076 DDB2Q92466 427 aa17.75■□□□□ 0.43
CLN6-224ENST00000638076 DIRC2Q96SL1 478 aa17.75■□□□□ 0.43
CLN6-224ENST00000638076 GNG13Q9P2W3 67 aa17.75■□□□□ 0.43
CLN6-224ENST00000638076 SAA2-SAA4A0A096LPE2 208 aa17.74■□□□□ 0.43
CLN6-224ENST00000638076 FAM90A9PA6NNJ1 464 aa17.74■□□□□ 0.43
CLN6-224ENST00000638076 SAA2P0DJI9 122 aaPredicted RBP17.74■□□□□ 0.43
CLN6-224ENST00000638076 FGF8P55075 233 aaPredicted RBP17.74■□□□□ 0.43
CLN6-224ENST00000638076 ERVK-16P61578 105 aa17.74■□□□□ 0.43
CLN6-224ENST00000638076 OR4A16Q8NH70 328 aa17.74■□□□□ 0.43
CLN6-224ENST00000638076 UNKLQ9H9P5 680 aaKnown RBP17.74■□□□□ 0.43
CLN6-224ENST00000638076 TIMM9Q9Y5J7 89 aa17.74■□□□□ 0.43
CLN6-224ENST00000638076 ADGRG4Q8IZF6 3080 aa17.74■□□□□ 0.43
CLN6-224ENST00000638076 TMPRSS2O15393 492 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 KIR2DS2P43631 304 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 AARDQ4LEZ3 155 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 KHDC3LQ587J8 217 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 CYB561D1Q8N8Q1 229 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 IDI2-AS1Q9NZ38 188 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 DSCAML1Q8TD84 2053 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 ZNF729A6NN14 1252 aaPredicted RBP17.73■□□□□ 0.43
CLN6-224ENST00000638076 CRYBA1P05813 215 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 NQO2P16083 231 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 RBPJQ06330 500 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 RHEBQ15382 184 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 C15orf54Q8N8G6 183 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 RND1Q92730 232 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 WFIKKN1Q96NZ8 548 aa17.73■□□□□ 0.43
CLN6-224ENST00000638076 LOC102723971A0A1B0GUV8 181 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 FGF7P21781 194 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 CENPVQ7Z7K6 275 aaPredicted RBP17.72■□□□□ 0.43
CLN6-224ENST00000638076 ZFP92A6NM28 416 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 C15orf62A8K5M9 175 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 MMP23AO75900 390 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 NDUFB7P17568 137 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 PAX6P26367 422 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 GNG10P50151 68 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 GNB2P62879 340 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 AVPI1Q5T686 147 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 SSX8Q7RTT4 187 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 LYG1Q8N1E2 194 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.72■□□□□ 0.43
CLN6-224ENST00000638076 ZNF439Q8NDP4 499 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 OR4S2Q8NH73 311 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 ZNF251Q9BRH9 671 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 TANC2Q9HCD6 1990 aa17.72■□□□□ 0.43
CLN6-224ENST00000638076 TRAV3A0A0B4J244 114 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms