RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 IDO2Q6ZQW0 420 aa13.71□□□□□ -0.21
PNKP-230ENST00000638016 DCUN1D4Q92564 292 aa13.71□□□□□ -0.21
PNKP-230ENST00000638016 IGLV2-14P01704 120 aa13.7□□□□□ -0.22
PNKP-230ENST00000638016 APELAP0DMC3 54 aa13.7□□□□□ -0.22
PNKP-230ENST00000638016 TPPP2P59282 170 aa13.7□□□□□ -0.22
PNKP-230ENST00000638016 RPL30P62888 115 aaKnown RBP13.7□□□□□ -0.22
PNKP-230ENST00000638016 DGCR2P98153 550 aa13.7□□□□□ -0.22
PNKP-230ENST00000638016 OR2B11Q5JQS5 317 aa13.7□□□□□ -0.22
PNKP-230ENST00000638016 C9orf66Q5T8R8 295 aa13.7□□□□□ -0.22
PNKP-230ENST00000638016 GVQW1Q8N7I0 195 aa13.7□□□□□ -0.22
PNKP-230ENST00000638016 OR5T1Q8NG75 326 aa13.7□□□□□ -0.22
PNKP-230ENST00000638016 DLX4Q92988 240 aaPredicted RBP13.7□□□□□ -0.22
PNKP-230ENST00000638016 GPHA2Q96T91 129 aa13.7□□□□□ -0.22
PNKP-230ENST00000638016 TRAV18A0A075B6X5 111 aa13.69□□□□□ -0.22
PNKP-230ENST00000638016 SHOXO15266 292 aa13.69□□□□□ -0.22
PNKP-230ENST00000638016 CRYZL1O95825 349 aa13.69□□□□□ -0.22
PNKP-230ENST00000638016 LGALS1P09382 135 aaKnown RBP13.69□□□□□ -0.22
PNKP-230ENST00000638016 OR8U8P0C7N1 319 aa13.69□□□□□ -0.22
PNKP-230ENST00000638016 ECI1P42126 302 aa13.69□□□□□ -0.22
PNKP-230ENST00000638016 LSM3P62310 102 aaKnown RBP13.69□□□□□ -0.22
PNKP-230ENST00000638016 TMEM267Q0VDI3 215 aaPredicted RBP13.69□□□□□ -0.22
PNKP-230ENST00000638016 ARL6IP1Q15041 203 aa13.69□□□□□ -0.22
PNKP-230ENST00000638016 AKIRIN2Q53H80 203 aa13.69□□□□□ -0.22
PNKP-230ENST00000638016 TMEM177Q53S58 311 aa13.69□□□□□ -0.22
PNKP-230ENST00000638016 TCTEX1D1Q8N7M0 179 aa13.69□□□□□ -0.22
PNKP-230ENST00000638016 SORL1Q92673 2214 aa13.69□□□□□ -0.22
PNKP-230ENST00000638016 COL7A1Q02388 2944 aa13.68□□□□□ -0.22
PNKP-230ENST00000638016 CNIH1O95406 144 aa13.68□□□□□ -0.22
PNKP-230ENST00000638016 TAGLNQ01995 201 aaKnown RBP13.68□□□□□ -0.22
PNKP-230ENST00000638016 RTL8BQ17RB0 113 aa13.68□□□□□ -0.22
PNKP-230ENST00000638016 DCSTAMPQ9H295 470 aa13.68□□□□□ -0.22
PNKP-230ENST00000638016 OR2W1Q9Y3N9 320 aa13.68□□□□□ -0.22
PNKP-230ENST00000638016 LINC01619G3V211 115 aa13.67□□□□□ -0.22
PNKP-230ENST00000638016 HLA-DQB1P01920 261 aa13.67□□□□□ -0.22
PNKP-230ENST00000638016 TRGV3P03979 118 aa13.67□□□□□ -0.22
PNKP-230ENST00000638016 LGALS7P47929 136 aa13.67□□□□□ -0.22
PNKP-230ENST00000638016 CNIH2Q6PI25 160 aa13.67□□□□□ -0.22
PNKP-230ENST00000638016 ZNF645Q8N7E2 425 aa13.67□□□□□ -0.22
PNKP-230ENST00000638016 YIPF6Q96EC8 236 aa13.67□□□□□ -0.22
PNKP-230ENST00000638016 ZNF355PQ9NSJ1 428 aa13.67□□□□□ -0.22
PNKP-230ENST00000638016 ANXA10Q9UJ72 324 aa13.67□□□□□ -0.22
PNKP-230ENST00000638016 ETV7Q9Y603 341 aa13.67□□□□□ -0.22
PNKP-230ENST00000638016 MEIS3P1A6NDR6 274 aa13.66□□□□□ -0.22
PNKP-230ENST00000638016 OVOL1O14753 267 aa13.66□□□□□ -0.22
PNKP-230ENST00000638016 FCGR3BO75015 233 aa13.66□□□□□ -0.22
PNKP-230ENST00000638016 RBMXL2O75526 392 aaKnown RBP13.66□□□□□ -0.22
PNKP-230ENST00000638016 TUSC2O75896 110 aa13.66□□□□□ -0.22
PNKP-230ENST00000638016 SCGNO76038 276 aa13.66□□□□□ -0.22
PNKP-230ENST00000638016 PITPNAQ00169 270 aa13.66□□□□□ -0.22
PNKP-230ENST00000638016 C10orf55Q5SWW7 151 aa13.66□□□□□ -0.22
PNKP-230ENST00000638016 POC5Q8NA72 575 aa13.66□□□□□ -0.22
PNKP-230ENST00000638016 RHOVQ96L33 236 aa13.66□□□□□ -0.22
PNKP-230ENST00000638016 RBMX2Q9Y388 322 aaKnown RBP13.66□□□□□ -0.22
PNKP-230ENST00000638016 SAA1P0DJI8 122 aaPredicted RBP13.65□□□□□ -0.22
PNKP-230ENST00000638016 RPS19P39019 145 aaKnown RBP13.65□□□□□ -0.22
PNKP-230ENST00000638016 CBX3Q13185 183 aa13.65□□□□□ -0.22
PNKP-230ENST00000638016 TNXAQ16473 311 aa13.65□□□□□ -0.22
PNKP-230ENST00000638016 PYHIN1Q6K0P9 492 aa13.65□□□□□ -0.22
PNKP-230ENST00000638016 KCTD9Q7L273 389 aa13.65□□□□□ -0.22
PNKP-230ENST00000638016 HAPLN4Q86UW8 402 aa13.65□□□□□ -0.22
PNKP-230ENST00000638016 VKORC1L1Q8N0U8 176 aa13.65□□□□□ -0.22
PNKP-230ENST00000638016 BEST4Q8NFU0 473 aa13.65□□□□□ -0.22
PNKP-230ENST00000638016 TSPAN14Q8NG11 270 aa13.65□□□□□ -0.22
PNKP-230ENST00000638016 ADTRPQ96IZ2 230 aa13.65□□□□□ -0.22
PNKP-230ENST00000638016 SPATA2Q9UM82 520 aa13.65□□□□□ -0.22
PNKP-230ENST00000638016 HUWE1Q7Z6Z7 4374 aaKnown RBP13.64□□□□□ -0.23
PNKP-230ENST00000638016 AIREO43918 545 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 RAMP3O60896 148 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 CTXN2P0C2S0 81 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 RRASP10301 218 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 AADACP22760 399 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 BRWD1-AS2P59051 145 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 UBE2KP61086 200 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 CD69Q07108 199 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 EIF4EBP1Q13541 118 aaPredicted RBP13.64□□□□□ -0.23
PNKP-230ENST00000638016 PRSS8Q16651 343 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 VMA21Q3ZAQ7 101 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 ACOT12Q8WYK0 555 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 SNAPC3Q92966 411 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 B9D2Q9BPU9 175 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 AUNIPQ9H7T9 357 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 ZNF430Q9H8G1 570 aaPredicted RBP13.64□□□□□ -0.23
PNKP-230ENST00000638016 TAS2R8Q9NYW2 309 aa13.64□□□□□ -0.23
PNKP-230ENST00000638016 LSM4Q9Y4Z0 139 aaKnown RBP13.64□□□□□ -0.23
PNKP-230ENST00000638016 ANKRD34BA5PLL1 514 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 MSGN1A6NI15 193 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 TNFSF12O43508 249 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 SAP30O75446 220 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 LY86O95711 162 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 TRBV12-3P01733 135 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 PRH1P02810 166 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 HSPB1P04792 205 aaKnown RBP13.63□□□□□ -0.23
PNKP-230ENST00000638016 SCAND1P57086 179 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 ARPC4P59998 168 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 HOGA1Q86XE5 327 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 TEX45Q8NA69 505 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 SRSF12Q8WXF0 261 aaKnown RBP13.63□□□□□ -0.23
PNKP-230ENST00000638016 PHB2Q99623 299 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 DCUN1D5Q9BTE7 237 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 SLA2Q9H6Q3 261 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms