RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 CD40LGP29965 261 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 LGALS7P47929 136 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 NDPQ00604 133 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 CDK10Q15131 360 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 RNASE12Q5GAN4 147 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 UNQ5815/PRO19632Q6UWF5 114 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 PPP1R27Q86WC6 154 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 OR5AP2Q8NGF4 316 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 OR5H2Q8NGV7 314 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 ARPC1AQ92747 370 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 SNAPC3Q92966 411 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 PHB2Q99623 299 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 SLC5A7Q9GZV3 580 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 ZNF355PQ9NSJ1 428 aa11.3□□□□□ -0.6
CACNA1A-249ENST00000637777 LINC00473A8K010 186 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 RGS5O15539 181 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 TNFSF12O43508 249 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 PPYP01298 95 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 PMP2P02689 132 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 ELK1P19419 428 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 SLC6A1P30531 599 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 ALDH3B2P48448 385 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 TAS2R46P59540 309 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 FXYD3Q14802 87 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 DEFB136Q30KP8 78 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 ACTBL2Q562R1 376 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 OXLD1Q5BKU9 147 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 CMTM3Q96MX0 182 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 DUX3Q96PT4 197 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 OR5B12Q96R08 314 aa11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 HSD17B10Q99714 261 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-249ENST00000637777 MPPED1O15442 326 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 ACTL6BO94805 426 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 IGLL1P15814 213 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 CFHR3Q02985 330 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 TMEM177Q53S58 311 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 IDO2Q6ZQW0 420 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 LFNGQ8NES3 379 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 OR4S2Q8NH73 311 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 OSR1Q8TAX0 266 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 CASTOR1Q8WTX7 329 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 RAB2BQ8WUD1 216 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 CCL28Q9NRJ3 127 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 EXTL2Q9UBQ6 330 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 ZNF580Q9UK33 172 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 FBXO7Q9Y3I1 522 aa11.28□□□□□ -0.6
CACNA1A-249ENST00000637777 CCDC160A6NGH7 325 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 CCL24O00175 119 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 CREBL2O60519 120 aaPredicted RBP11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 PSMB8P28062 276 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 HLA-DMAP28067 261 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 MYCNOSP40205 109 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 RFX2P48378 723 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 TSPAN5P62079 268 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 CATR1Q13166 79 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 TNXAQ16473 311 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 ZNF562Q6V9R5 426 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 TCTEX1D1Q8N7M0 179 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 DPF1Q92782 380 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 MS4A10Q96PG2 267 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 GPHA2Q96T91 129 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 ZNF2Q9BSG1 426 aaPredicted RBP11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 SCOCQ9UIL1 159 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 ADAM30Q9UKF2 790 aa11.27□□□□□ -0.61
CACNA1A-249ENST00000637777 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 APELAP0DMC3 54 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 HRH1P35367 487 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 KIR2DS2P43631 304 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 RPL5P46777 297 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 CDX1P47902 265 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 TPPP2P59282 170 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 UBE2KP61086 200 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 RPL30P62888 115 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 PJVKQ0ZLH3 352 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 SPCS2Q15005 226 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 SAMD5Q5TGI4 173 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 AADACL3Q5VUY0 350 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 PYHIN1Q6K0P9 492 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 ZNF66Q6ZN08 573 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 MRPL41Q8IXM3 137 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 MFSD4AQ8N468 514 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 POC5Q8NA72 575 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 C4orf3Q8WVX3 66 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 DDB2Q92466 427 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 BORCS5Q969J3 196 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 RCC1LQ96I51 464 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 KLK15Q9H2R5 256 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 SCPEP1Q9HB40 452 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 VSIG4Q9Y279 399 aa11.26□□□□□ -0.61
CACNA1A-249ENST00000637777 SRRM4A7MD48 611 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-249ENST00000637777 PRB2P02812 416 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-249ENST00000637777 SAA1P0DJI8 122 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-249ENST00000637777 RCVRNP35243 200 aa11.25□□□□□ -0.61
CACNA1A-249ENST00000637777 RAB9AP51151 201 aa11.25□□□□□ -0.61
CACNA1A-249ENST00000637777 ETV3LQ6ZN32 361 aa11.25□□□□□ -0.61
CACNA1A-249ENST00000637777 SSX9Q7RTT3 188 aa11.25□□□□□ -0.61
CACNA1A-249ENST00000637777 LINC00482Q8N8I6 264 aa11.25□□□□□ -0.61
CACNA1A-249ENST00000637777 RNF152Q8N8N0 203 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms